CuGenDBv2

Gene ID	CmoCh03G013590
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	AWPM-19-like protein
Genome location	Cmo_Chr03:10035571..10036874
RNA-Seq Expression	CmoCh03G013590
Synteny	CmoCh03G013590
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008390 - AWPM-19-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581397.1 hypothetical protein SDJN03_21399, partial [Cucurbita argyrosperma subsp. sororia]

4.3e-33

61.01

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        M AIA SIL FNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                        MALEA +IILSVTQFIYTAIIVCT TS
Subjt:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS

KAG7034682.1 hypothetical protein SDJN02_04412 [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-33

61.64

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        MKAIA SIL FNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                        MALEA +IILSVTQFIYTAIIVCT TS
Subjt:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS

XP_022925784.1 uncharacterized protein LOC111433089 [Cucurbita moschata]

2.5e-36

64.78

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                        MALEASLIILSVTQFIYTAIIVCTSTS
Subjt:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS

XP_022978777.1 uncharacterized protein LOC111478636 [Cucurbita maxima]

6.3e-32

61.44

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        M+AIA SI  FNFC S++IFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                  MALEA LIILSVTQFIYTAIIV TSTS
Subjt:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS

XP_023543821.1 uncharacterized protein LOC111803574 [Cucurbita pepo subsp. pepo]

5.7e-33

61.64

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        MKAIA SIL FNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                        MALEA +IILSVTQFIYTAIIV TSTS
Subjt:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AZB2 uncharacterized protein LOC103484407

4.5e-28

55.56

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        MKAIA  IL FNFC  IVIFGIGGWVMNH+IDNGFVIGA F+VP YFSPIFFQIGN+ATGFFV+FALIAAVA VAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                  +ALEA +I+LSVTQF+YTAIIV TSTS
Subjt:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS

A0A5A7UGF2 AWPM-19-like protein

4.5e-28

55.56

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        MKAIA  IL FNFC  IVIFGIGGWVMNH+IDNGFVIGA F+VP YFSPIFFQIGN+ATGFFV+FALIAAVA VAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                  +ALEA +I+LSVTQF+YTAIIV TSTS
Subjt:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS

A0A5D3CS83 Uncharacterized protein

4.5e-28

55.56

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        MKAIA  IL FNFC  IVIFGIGGWVMNH+IDNGFVIGA F+VP YFSPIFFQIGN+ATGFFV+FALIAAVA VAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                  +ALEA +I+LSVTQF+YTAIIV TSTS
Subjt:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS

A0A6J1ED64 uncharacterized protein LOC111433089

1.2e-36

64.78

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                        MALEASLIILSVTQFIYTAIIVCTSTS
Subjt:  --------------------------------MALEASLIILSVTQFIYTAIIVCTSTS

A0A6J1IM08 uncharacterized protein LOC111478636

3.0e-32

61.44

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------
        M+AIA SI  FNFC S++IFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS                        
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS------------------------

Query:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS
                                  MALEA LIILSVTQFIYTAIIV TSTS
Subjt:  --------------------------MALEASLIILSVTQFIYTAIIVCTSTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G29520.1 AWPM-19-like family protein

6.5e-19

52.63

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS
        +K +A  +L+ NFC  +++ GIGGW MN +ID+GF +G   E+P +FSPI+F +GN ATGFFV+FAL+A V   AS
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS

AT5G18970.1 AWPM-19-like family protein

3.3e-07

38.67

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Query:  KAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS
        K+ A  +L+ N     VI  I  W +NH I+      +   +P    PI+F +GN ATGFFV+F LIA V  +A+
Subjt:  KAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVAS

AT5G46530.1 AWPM-19-like family protein

4.2e-18

53.25

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Query:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVASM
        MK +A  +L+ NFC   ++ GIG W MN +I++GF+IGA++ +P +FSPI F +GN ATGFF++FALIA VA  AS+
Subjt:  MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVASM

Sequences

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CDS sequence

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ATGAAGGCCATTGCTCAGTCGATTTTGTTGTTCAATTTCTGCGCTAGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCACTCAATTGATAATGGATTT
GTTATTGGTGCTGAGTTTGAAGTTCCTGTATATTTTTCTCCAATTTTCTTCCAAATTGGGAACACTGCCACTGGGTTCTTCGTTGTTTTTGCTTTGATTGCTGCT
GTTGCTACTGTTGCATCTATGGCATTGGAGGCTTCCCTGATTATCCTTTCAGTTACGCAGTTTATTTACACTGCAATCATTGTGTGTACCTCAACCAGCTAG

mRNA sequence

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CCCTCCATGGAAAAGCAAAAAATGGTGAGACCTTTATGTGTAAAAAATTGCATCAAATTTCGTGTGTGAAAGAAGAGGCAAGCAAGAATGATTCACTTCCCCTTT
ACATCCAATTCTGATCCCTTTTGGCAAGAAAAGAACCTGACATCCTCCCTTAAAATGCTTTCAACAAAACCCCAACTCTCCATAGGATGAACTCTCAAGTTTAAA
GCCATAAACAAAACTCTTTCATCTCAAAACCCTTCTTTCTTCTATACAACCCATTTGAAGATATGAAGGCCATTGCTCAGTCGATTTTGTTGTTCAATTTCTGCG
CTAGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCACTCAATTGATAATGGATTTGTTATTGGTGCTGAGTTTGAAGTTCCTGTATATTTTTCTCCAA
TTTTCTTCCAAATTGGGAACACTGCCACTGGGTTCTTCGTTGTTTTTGCTTTGATTGCTGCTGTTGCTACTGTTGCATCTATGGCATTGGAGGCTTCCCTGATTA
TCCTTTCAGTTACGCAGTTTATTTACACTGCAATCATTGTGTGTACCTCAACCAGCTAGTCGACTCGAAATAACGTTCACCAAACGCTTAGTTAGTGGGGTTTGC
TTTCAAATTTTCTTTCCTTTCCATTCTTTATTTTTCTCTACTTCAGCTCTATATGTAAATGGGGAGAAACTCACAGTTGGTGTGCAAAAAAAGAATAAAATTTCA
ATGACTTTGA

Protein sequence

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MKAIAQSILLFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVASMALEASLIILSVTQFIYTAIIVCTSTS

CmoCh03G013590 (gene) of Cucurbita moschata (Rifu) v1 genome