; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G013760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G013760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr03:10108407..10109204
RNA-Seq ExpressionCmoCh03G013760
SyntenyCmoCh03G013760
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926033.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata]2.3e-150100Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_022926035.1 chlorophyll a-b binding protein of LHCII type 1 [Cucurbita moschata]1.1e-14999.62Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAV LSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_022979177.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]9.5e-14999.25Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAV LSPNT DIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_023545171.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo]1.0e-14798.11Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAG A+ LSPN PDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_038882052.1 chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]8.0e-14898.11Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAV LSPNTP+IQGN RVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QVVLMGAVEGYRIAGGPLGEV DPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

TrEMBL top hitse value%identityAlignment
A0A5D3CNU3 Chlorophyll a-b binding protein, chloroplastic1.1e-14595.85Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAV LSPN P+IQG  R++MRKTA+KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEV DPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A6J1EGW9 Chlorophyll a-b binding protein, chloroplastic1.1e-150100Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A6J1EJV8 Chlorophyll a-b binding protein, chloroplastic5.4e-15099.62Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAV LSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A6J1IN31 Chlorophyll a-b binding protein, chloroplastic4.6e-14999.25Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAV LSPNT DIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A6J1IQ16 Chlorophyll a-b binding protein, chloroplastic5.4e-15099.62Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAV LSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

SwissProt top hitse value%identityAlignment
P07369 Chlorophyll a-b binding protein 3C, chloroplastic3.7e-14090.64Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MA STMALSS + AGKAV LSP++ +I GN RV+MRKTA+K+   SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVVDP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P08221 Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment)7.3e-14495.69Show/hide
Query:  PSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL
        P+LAG+AV LSPN P+IQGNA+ +MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL
Subjt:  PSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL

Query:  GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLADDPEAFAELK
        GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEV DPIYPGGSFDPLGLADDPEAFAELK
Subjt:  GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLADDPEAFAELK

Query:  VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P09756 Chlorophyll a-b binding protein 3, chloroplastic1.1e-14293.56Show/hide
Query:  AASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
        AAS+MALSSPSLAGKAV L P+ P++    RVSMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Subjt:  AASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH

Query:  SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLAD
        SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQV+LMGAVEGYRIAGGPLGEV DPIYPGGSFDPLGLAD
Subjt:  SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLAD

Query:  DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK
Subjt:  DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P27493 Chlorophyll a-b binding protein 21, chloroplastic3.1e-14290.94Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAA+TMALSSPS AG+AV LSP+ P+I GN RVSMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA
        H RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEVVDP+YPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        +DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P27495 Chlorophyll a-b binding protein 40, chloroplastic3.1e-14291.76Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTAS--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MAASTMALSSPS AGKAV LSP++ +I GN +V+MRKTAS  K+VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTAS--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLGEVVDP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 39.8e-13687.64Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAASTMALSSP+ AGKAVNLSP   ++ G+ RV+MRKT +K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29920.1 chlorophyll A/B-binding protein 29.8e-13687.64Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAASTMALSSP+ AGKAVNLSP   ++ G+ RV+MRKT +K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29930.1 chlorophyll A/B binding protein 14.9e-13587.27Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAASTMALSSP+ AGKAV LSP   ++ G+ RV+MRKT +K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34420.1 photosystem II light harvesting complex gene B1B27.0e-13487.27Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA+STMALSSP+ AGKAV   P   D+ G+ RV+MRKT +K    SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B15.7e-13687.22Show/hide
Query:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSP+L GKAV LSP   ++ G  R++MRK +  +  SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVI
Subjt:  MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLGL
        HSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGL
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-GPLGEVVDPIYPGGSFDPLGL

Query:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        A DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTTCCACAATGGCTCTTTCTTCTCCATCACTGGCTGGTAAGGCCGTGAATCTCTCCCCCAACACCCCTGACATTCAGGGCAATGCAAGAGTCAGCATGAGGAA
GACCGCCAGCAAGTCAGTTTCCTCTGGCAGCCCATGGTACGGCCCCGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACCTCACCGGAGAGTTCC
CCGGTGACTACGGTTGGGACACTGCTGGACTTTCAGCCGACCCCGAGACCTTCGCCAAGAACCGTGAGCTGGAAGTGATCCACTCCAGATGGGCCATGCTCGGAGCTTTG
GGCTGTGTGTTCCCCGAGCTTCTGTCCCGCAATGGCGTGAAGTTCGGCGAGGCTGTTTGGTTCAAGGCAGGATCTCAGATCTTCAGCGAGGGAGGCCTCGACTACTTGGG
CAACCCCAGCCTGATCCACGCACAGAGCATTTTGGCCATCTGGGCCACTCAGGTTGTGTTGATGGGCGCCGTCGAAGGGTACCGTATTGCCGGAGGCCCACTCGGGGAGG
TCGTCGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTCTTGCTGACGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGCTCAAGAATGGAAGGCTGGCC
ATGTTCTCCATGTTTGGATTCTTCGTTCAGGCCATTGTCACCGGAAAGGGTCCTTTGGAAAACTTGGCTGACCACCTTGCCGACCCAGTCAACAACAACGCATGGGCCTA
CGCCACAAACTTTGTTCCTGGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTTCCACAATGGCTCTTTCTTCTCCATCACTGGCTGGTAAGGCCGTGAATCTCTCCCCCAACACCCCTGACATTCAGGGCAATGCAAGAGTCAGCATGAGGAA
GACCGCCAGCAAGTCAGTTTCCTCTGGCAGCCCATGGTACGGCCCCGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACCTCACCGGAGAGTTCC
CCGGTGACTACGGTTGGGACACTGCTGGACTTTCAGCCGACCCCGAGACCTTCGCCAAGAACCGTGAGCTGGAAGTGATCCACTCCAGATGGGCCATGCTCGGAGCTTTG
GGCTGTGTGTTCCCCGAGCTTCTGTCCCGCAATGGCGTGAAGTTCGGCGAGGCTGTTTGGTTCAAGGCAGGATCTCAGATCTTCAGCGAGGGAGGCCTCGACTACTTGGG
CAACCCCAGCCTGATCCACGCACAGAGCATTTTGGCCATCTGGGCCACTCAGGTTGTGTTGATGGGCGCCGTCGAAGGGTACCGTATTGCCGGAGGCCCACTCGGGGAGG
TCGTCGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTCTTGCTGACGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGCTCAAGAATGGAAGGCTGGCC
ATGTTCTCCATGTTTGGATTCTTCGTTCAGGCCATTGTCACCGGAAAGGGTCCTTTGGAAAACTTGGCTGACCACCTTGCCGACCCAGTCAACAACAACGCATGGGCCTA
CGCCACAAACTTTGTTCCTGGAAAGTGA
Protein sequenceShow/hide protein sequence
MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL
GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLA
MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK