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CmoCh03G013780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G013780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr03:10118420..10120147
RNA-Seq ExpressionCmoCh03G013780
SyntenyCmoCh03G013780
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581417.1 hypothetical protein SDJN03_21419, partial [Cucurbita argyrosperma subsp. sororia]1.0e-27100Show/hide
Query:  MDDAIDRKKTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFF
        MDDAIDRKKTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFF
Subjt:  MDDAIDRKKTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFF

KAG7034699.1 hypothetical protein SDJN02_04429, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-31100Show/hide
Query:  MDDAIDRKKTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        MDDAIDRKKTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
Subjt:  MDDAIDRKKTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG

KGN49382.1 hypothetical protein Csa_004198 [Cucumis sativus]4.0e-2481.33Show/hide
Query:  MDDAIDRKKTK--KRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        MDDAIDRKKTK  K+R FS QRLRDSWKWKFLK+FKWKRLNL +GF DAIIFRI SLFE +AL+GIA FFFLCCG
Subjt:  MDDAIDRKKTK--KRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG

XP_023929751.1 uncharacterized protein LOC112041078 [Quercus suber]1.1e-0856.06Show/hide
Query:  KKRRAFSIQRLR--DSWKWKFL-KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        KK R    +RLR   +W+WKFL   FKWKRLNLH+ F+D ++FRI S+FEAI L+    FF+LCCG
Subjt:  KKRRAFSIQRLR--DSWKWKFL-KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG

XP_035544743.1 uncharacterized protein LOC108990492 [Juglans regia]6.9e-0854.55Show/hide
Query:  KKRRAFSIQRLR-DSWKWKFL--KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        KK R  S ++LR  +W+WKF     F+WKRLNL + F+D ++FRIASLFEAI L+    FF+LCCG
Subjt:  KKRRAFSIQRLR-DSWKWKFL--KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG

TrEMBL top hitse value%identityAlignment
A0A0A0KLX9 Uncharacterized protein1.9e-2481.33Show/hide
Query:  MDDAIDRKKTK--KRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        MDDAIDRKKTK  K+R FS QRLRDSWKWKFLK+FKWKRLNL +GF DAIIFRI SLFE +AL+GIA FFFLCCG
Subjt:  MDDAIDRKKTK--KRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG

A0A1R3FVP9 Uncharacterized protein5.7e-0845.95Show/hide
Query:  MDDAIDRKKTKKRRAFSIQRLRDSWKWKFL-KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        MD       + KR     + +++SW+WKFL   FKWKRLN+ + F D ++FRIAS+ EAI L+    FF+LCCG
Subjt:  MDDAIDRKKTKKRRAFSIQRLRDSWKWKFL-KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG

A0A6J1B6L1 uncharacterized protein LOC1104245712.2e-0750Show/hide
Query:  KTKKRRAFSIQRLRDSWKWKFL-KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        +TK+   F     ++SW+WKFL   FKWKRLN+ + F+D ++FRIAS+ EAI L+    FF+LCCG
Subjt:  KTKKRRAFSIQRLRDSWKWKFL-KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG

A0A6P9EL64 uncharacterized protein LOC1089904923.3e-0854.55Show/hide
Query:  KKRRAFSIQRLR-DSWKWKFL--KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        KK R  S ++LR  +W+WKF     F+WKRLNL + F+D ++FRIASLFEAI L+    FF+LCCG
Subjt:  KKRRAFSIQRLR-DSWKWKFL--KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG

A0A7N2LSF8 Uncharacterized protein4.4e-0854.55Show/hide
Query:  KKRRAFSIQRLR--DSWKWKFL-KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        KK R    +RLR   +W+WKFL   FKWKRLNL + F+D ++FRI S+FEAI L+    FF+LCCG
Subjt:  KKRRAFSIQRLR--DSWKWKFL-KDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G46295.1 unknown protein9.0e-0655Show/hide
Query:  KWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG
        KWKRLNL + FL+ + +RI S+ EA+ L+    FFFLCCG
Subjt:  KWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGCAATCGATAGGAAGAAGACGAAGAAGAGGAGAGCATTCAGCATCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTCCTTAAGGATTTCAAGTGGAAGAG
ATTGAATCTCCACATCGGTTTCTTAGATGCTATAATCTTTCGAATCGCTTCTCTGTTTGAGGCCATTGCGTTGATAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCG
TTTTTCTTTTCCAGTCGTTCTTAATTTGTTCATTAATTTGTTGTCTCTGGCCAAGCACTGCAACACAAAATGTAGATCGGCTTTCGAATCTCTCTTCTCTATTTGAATCG
TTTTCTCTGTGGCTTCGATCTGACGAACTCGTTAATCTAGCAAATTCAATTCATTATAAAATTATATTGAAGAAGTTTGTTGGTATGGTAGATTGGCGAAGGGTTGAGCA
GTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATGCAATCGATAGGAAGAAGACGAAGAAGAGGAGAGCATTCAGCATCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTCCTTAAGGATTTCAAGTGGAAGAG
ATTGAATCTCCACATCGGTTTCTTAGATGCTATAATCTTTCGAATCGCTTCTCTGTTTGAGGCCATTGCGTTGATAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCG
TTTTTCTTTTCCAGTCGTTCTTAATTTGTTCATTAATTTGTTGTCTCTGGCCAAGCACTGCAACACAAAATGTAGATCGGCTTTCGAATCTCTCTTCTCTATTTGAATCG
TTTTCTCTGTGGCTTCGATCTGACGAACTCGTTAATCTAGCAAATTCAATTCATTATAAAATTATATTGAAGAAGTTTGTTGGTATGGTAGATTGGCGAAGGGTTGAGCA
GTAG
Protein sequenceShow/hide protein sequence
MDDAIDRKKTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCGVFLFQSFLICSLICCLWPSTATQNVDRLSNLSSLFES
FSLWLRSDELVNLANSIHYKIILKKFVGMVDWRRVEQ