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CmoCh03G014170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G014170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationCmo_Chr03:10257897..10258785
RNA-Seq ExpressionCmoCh03G014170
SyntenyCmoCh03G014170
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052524.1 hypothetical protein E6C27_scaffold120G001250 [Cucumis melo var. makuwa]4.4e-1877.03Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASP-RSLPSSTTPAPMVVSANSIFAGNN
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEE+R+ +KNEYPA+P RSL SS+T A M V ANS++   N
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASP-RSLPSSTTPAPMVVSANSIFAGNN

KAG5235151.1 galactosyltransferase family [Salix suchowensis]2.0e-1061.43Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNE-YPASPRSLPSSTTPAPMVVSANSIF
        MANSRIA+F+TE APPQ ISVMR RTSK+LDTISEE+RD + ++ +P SP S    TT A  V + NS F
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNE-YPASPRSLPSSTTPAPMVVSANSIF

KAG6594447.1 hypothetical protein SDJN03_11000, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1981.82Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASPRSLPSSTTPAPMVVSANS-IFAGNNNPS
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERD SK EYPASP S   STTPAP  VSANS  F  N N S
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASPRSLPSSTTPAPMVVSANS-IFAGNNNPS

KAG7034740.1 hypothetical protein SDJN02_04470, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-2789.74Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASPRSLPSSTTPAPMVVSANSIFAGNNNPSQQ
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASPRSLPSSTTPAPMVVSANSI   + N ++Q
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASPRSLPSSTTPAPMVVSANSIFAGNNNPSQQ

KGN49420.1 hypothetical protein Csa_003492 [Cucumis sativus]1.8e-1974.7Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPAS-PRSLPSSTTPAPMVVSANSIFAGNN--NPSQQIN
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEE+R+ +KNEYPA+ PRSL SSTT A MVV+ANS++   N   P  +IN
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPAS-PRSLPSSTTPAPMVVSANSIFAGNN--NPSQQIN

TrEMBL top hitse value%identityAlignment
A0A0A0KI68 Uncharacterized protein8.7e-2074.7Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPAS-PRSLPSSTTPAPMVVSANSIFAGNN--NPSQQIN
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEE+R+ +KNEYPA+ PRSL SSTT A MVV+ANS++   N   P  +IN
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPAS-PRSLPSSTTPAPMVVSANSIFAGNN--NPSQQIN

A0A3N7FR06 Uncharacterized protein3.6e-1058.57Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-GSKNEYPASPRSLPSSTTPAPMVVSANSIF
        MANSRIA+F+TE APPQ ISVMR RTSK+LDTISEE+RD  + + +P +P S    TT A  V + NS +
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-GSKNEYPASPRSLPSSTTPAPMVVSANSIF

A0A5D3CN92 Uncharacterized protein2.1e-1877.03Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASP-RSLPSSTTPAPMVVSANSIFAGNN
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEE+R+ +KNEYPA+P RSL SS+T A M V ANS++   N
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASP-RSLPSSTTPAPMVVSANSIFAGNN

A0A7J7GTQ9 Uncharacterized protein1.6e-1060.87Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-GSKNEYPASPRSLPSSTTPAPMVVSANSI
        MAN+RIARFVTEVAPPQ +SVMR R SK+LDTI+EEERD GS +    SP+S  SS++  P   S ++I
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-GSKNEYPASPRSLPSSTTPAPMVVSANSI

W9QKX7 Uncharacterized protein2.1e-1062.69Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASPRSLPSSTTPAPMVVSANS
        MANSRIARF+TEVAPPQ +SVMR RTSKVLDTI EEERD   N+   SP + P+ T P+    S+ S
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASPRSLPSSTTPAPMVVSANS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)2.5e-1155.41Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-GSKNEYPASPRSLPSS---TTPAPMVVSANSIFA
        MA SR+ARF+TEVAPPQ ++VMRRRT+KVLDTI EEER+ G+ + +P+S  S   S   T+P    VS+ S  A
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-GSKNEYPASPRSLPSS---TTPAPMVVSANSIFA

AT4G21060.1 Galactosyltransferase family protein7.0e-0664.1Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRR--TSKVLDTISEEE
        MA SR+ARFV+EVAPPQ ++VMRR     + LDTI EEE
Subjt:  MANSRIARFVTEVAPPQIISVMRRR--TSKVLDTISEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATTCCCGTATAGCAAGGTTCGTTACCGAGGTGGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACGTCAAAAGTGTTGGATACCATCAGTGAAGAGGA
GAGAGATGGCAGCAAGAATGAGTATCCTGCTTCTCCAAGAAGCCTACCATCATCAACAACCCCTGCGCCTATGGTTGTTAGTGCCAATTCTATCTTCGCTGGAAACAACA
ATCCTTCCCAACAAATTAACCCAGCAACCTTCTTTACTTTTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATTCCCGTATAGCAAGGTTCGTTACCGAGGTGGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACGTCAAAAGTGTTGGATACCATCAGTGAAGAGGA
GAGAGATGGCAGCAAGAATGAGTATCCTGCTTCTCCAAGAAGCCTACCATCATCAACAACCCCTGCGCCTATGGTTGTTAGTGCCAATTCTATCTTCGCTGGAAACAACA
ATCCTTCCCAACAAATTAACCCAGCAACCTTCTTTACTTTTGGATAA
Protein sequenceShow/hide protein sequence
MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERDGSKNEYPASPRSLPSSTTPAPMVVSANSIFAGNNNPSQQINPATFFTFG