CuGenDBv2

Gene ID	CmoCh03G014490
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal
Genome location	Cmo_Chr03:10481884..10485422
RNA-Seq Expression	CmoCh03G014490
Synteny	CmoCh03G014490
Gene Ontology terms	GO:0042372 - phylloquinone biosynthetic process (biological process) GO:0005777 - peroxisome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0016874 - ligase activity (molecular function)
InterPro domains	IPR025110 - AMP-binding enzyme, C-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581476.1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-53

97.12

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Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VERILLQHPGVKGCAVV IPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE +
Subjt:  NEAL

TYK13336.1 2-succinylbenzoate--CoA ligase [Cucumis melo var. makuwa]

1.4e-44

81.73

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Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VERILLQHPGVKGC VV IPDSRLTEKAVACVQLE+DWQW+ET+ ELL GK+KQH+ +AILR+HC  CNLTGFK+PKEF KWGKPFPVTT GKLKRDA+R
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE L
Subjt:  NEAL

XP_022925969.1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X3 [Cucurbita moschata]

4.4e-54

98.08

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Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE +
Subjt:  NEAL

XP_022977909.1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X4 [Cucurbita maxima]

3.9e-50

92.31

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Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        V+RILLQHPGVKGCAVV IPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIK HL TAILRKHC DCNLTGFKIPKEF KWGKPFPVTTTGKLKRDAIR
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE +
Subjt:  NEAL

XP_023544286.1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X2 [Cucurbita pepo subsp. pepo]

7.0e-52

95.19

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Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VERILLQHPGVKGCAVV IPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHL TAILRKHC DCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE +
Subjt:  NEAL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AYL3 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X2

9.0e-45

80.77

Show/hide

Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VERILLQHPGVKGC VV IPDSRLTEKAVACVQLE+DWQW+ET+ ELL GK+KQH+ +AILR+HC  CNLTGFK+PKEF KWGKPFPVTT GKLKRDA+R
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE +
Subjt:  NEAL

A0A5A7UDB3 2-succinylbenzoate--CoA ligase

6.9e-45

81.73

Show/hide

Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VERILLQHPGVKGC VV IPDSRLTEKAVACVQLE+DWQW+ET+ ELL GK+KQH+ +AILR+HC  CNLTGFK+PKEF KWGKPFPVTT GKLKRDA+R
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE L
Subjt:  NEAL

A0A5D3CSF4 2-succinylbenzoate--CoA ligase

6.9e-45

81.73

Show/hide

Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VERILLQHPGVKGC VV IPDSRLTEKAVACVQLE+DWQW+ET+ ELL GK+KQH+ +AILR+HC  CNLTGFK+PKEF KWGKPFPVTT GKLKRDA+R
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE L
Subjt:  NEAL

A0A6J1EDP2 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X3

2.1e-54

98.08

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Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE +
Subjt:  NEAL

A0A6J1ISN9 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X4

1.9e-50

92.31

Show/hide

Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        V+RILLQHPGVKGCAVV IPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIK HL TAILRKHC DCNLTGFKIPKEF KWGKPFPVTTTGKLKRDAIR
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEAL
        NE +
Subjt:  NEAL

SwissProt top hits

e value

%identity

Alignment

A4YDR9 4-hydroxybutyrate--CoA ligase 2

6.7e-05

33.01

Show/hide

Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VE+ L++ PGVK  AV   PD +  E   A ++L+E  +   T  E++              K C +  L  F+ PK   ++G P P+T TGK+++  +R
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEA
        NEA
Subjt:  NEA

O07899 Vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase

9.7e-04

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Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VE  LL HP V   A++AI D  L E++ A + L                K +Q + T  L++  +   L  +KIP +  ++    P T+ GK+ ++A+R
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Q8VYJ1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal

6.0e-22

45.45

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Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VE +L++HPG+    V+ + D+RL E  VACV+L+E W W +        K    L +  L+ HC   NLTGFKIPK F +W K FP+TTTGK+KRD +R
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEALIIHFLV
         + L  HF +
Subjt:  NEALIIHFLV

Arabidopsis top hits

e value

%identity

Alignment

AT1G30520.1 acyl-activating enzyme 14

4.3e-23

45.45

Show/hide

Query:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR
        VE +L++HPG+    V+ + D+RL E  VACV+L+E W W +        K    L +  L+ HC   NLTGFKIPK F +W K FP+TTTGK+KRD +R
Subjt:  VERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRELLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIR

Query:  NEALIIHFLV
         + L  HF +
Subjt:  NEALIIHFLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGGTCCCATAAATCTCAAGTTGATTTAGGCTCACGAGCTTTGGACAAACTTGTAGAAAGACTCTACAATTGCTGCTGCTTTGTTGAAATGAAAACCAAAGAG
GATGAGACTTGGGTCAGAAAAGTGGACTCTTCGATAGGGAATTACAAAGACGATAGGGAATTACAAACTTGGATTGGGCTGGTGAATCAAATAAGCGAGGGCGGA
AGAGGACAGGCTGTTGTGCTTCCTCAAGAAACTGATGACTGGCTGGTGGAAGCCCTTAGTGGCTGGTGTTTAAGAAGGAAAATGAAGATCATATGGGGCTATGCG
GCTAGAGCTTTTTTTGTGGAATGTTGGCGGGAAAGAGATCATAGGCTCTTCGAAGATAGGATTACTAACCCCCCTCTTGGGAGGAGGCGATCCCTTCTTCCTTTC
GAACCACAACCTCCGAGCGTAGCAGCCACAACATTGAACCATAAAACCGAAGACTATAGTTGTCTTGGTGGTGTGGAGAGAATTCTATTGCAACATCCCGGAGTT
AAAGGCTGTGCTGTGGTGGCCATTCCTGATTCTCGTTTGACAGAGAAGGCTGTGGCTTGTGTTCAATTAGAAGAGGACTGGCAGTGGCATGAAACCAGTCGTGAA
CTTCTTGATGGAAAGATTAAACAGCATTTATATACCGCAATTCTTCGTAAACATTGCAATGACTGTAACTTAACTGGGTTCAAGATACCAAAGGAGTTTTTCAAG
TGGGGGAAGCCATTTCCAGTCACTACAACGGGAAAGTTGAAAAGAGACGCAATTCGAAATGAGGCACTTATTATTCACTTTTTGGTGTTCTTGCTCTTGTTCTTG
GCCTTGGCCTTCTCTGCTCTATCCACTAACCAGTTGAAAATGGTGGCATAA

mRNA sequence

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Protein sequence

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MRSHKSQVDLGSRALDKLVERLYNCCCFVEMKTKEDETWVRKVDSSIGNYKDDRELQTWIGLVNQISEGGRGQAVVLPQETDDWLVEALSGWCLRRKMKIIWGYA
ARAFFVECWRERDHRLFEDRITNPPLGRRRSLLPFEPQPPSVAATTLNHKTEDYSCLGGVERILLQHPGVKGCAVVAIPDSRLTEKAVACVQLEEDWQWHETSRE
LLDGKIKQHLYTAILRKHCNDCNLTGFKIPKEFFKWGKPFPVTTTGKLKRDAIRNEALIIHFLVFLLLFLALAFSALSTNQLKMVA

CmoCh03G014490 (gene) of Cucurbita moschata (Rifu) v1 genome