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CmoCh03G014810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G014810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionVacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome locationCmo_Chr03:10634721..10634987
RNA-Seq ExpressionCmoCh03G014810
SyntenyCmoCh03G014810
Gene Ontology termsGO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0012507 - ER to Golgi transport vesicle membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0033116 - endoplasmic reticulum-Golgi intermediate compartment membrane (cellular component)
InterPro domainsIPR019013 - Vacuolar ATPase assembly integral membrane protein Vma21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581507.1 hypothetical protein SDJN03_21509, partial [Cucurbita argyrosperma subsp. sororia]5.5e-29100Show/hide
Query:  GSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        GSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
Subjt:  GSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
XP_004134542.1 uncharacterized protein LOC101206493 [Cucumis sativus]3.4e-2692Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDP F+AEAKASINQS GKA+ PSQA NKKEE
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]8.6e-30100Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
XP_022977993.1 uncharacterized protein LOC111478118 [Cucurbita maxima]7.2e-2997.33Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGST LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQ+PGKAEDPSQANNKKEE
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
XP_038882777.1 protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]9.8e-2690.67Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAF+ EAKASINQS GK  +PSQA+NKKEE
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
TrEMBL top hitse value%identityAlignment
A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog1.6e-2692Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDP F+AEAKASINQS GKA+ PSQA NKKEE
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
A0A1S4DTT6 Vacuolar ATPase assembly integral membrane protein VMA21 homolog8.1e-2689.33Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGST+LNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAF+AEAKASINQS GKA+ PS+A+NKKEE
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
A0A5A7UE48 Vacuolar ATPase assembly integral membrane protein VMA21 homolog8.1e-2689.33Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGST+LNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAF+AEAKASINQS GKA+ PS+A+NKKEE
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog4.1e-30100Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
A0A6J1ISV9 Vacuolar ATPase assembly integral membrane protein VMA21 homolog3.5e-2997.33Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGST LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQ+PGKAEDPSQANNKKEE
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain3.4e-1661.33Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
        PGST L+PHSL LLSGFLAV+SVN VI  YI MAMKEP+ KH+PD AF+AEAK S+N+    A        KK+E
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE
AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain4.4e-1659.46Show/hide
Query:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKE
        PGST L+PHSLTLLSGFLAV+SVNVVI  YI +A+KEP+ KH+PD +FVAEAK S+ +      +   A  K+E
Subjt:  PGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGTGATTACATTTCTAAGTAAATACTCTTCTGGACCAGGTTCAACACAATTGAATCCGCATTCTCTTACACTCTTGAGTGGATTCCTTGCTGTCATATCA
GTCAATGTTGTCATTGCTATTTATATTATCATGGCAATGAAAGAACCCTCTAGTAAACATGAACCGGATCCTGCATTTGTTGCCGAGGCAAAAGCTAGTATAAAC
CAGTCTCCTGGGAAAGCAGAGGACCCCTCACAGGCCAATAATAAGAAGGAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCGTGATTACATTTCTAAGTAAATACTCTTCTGGACCAGGTTCAACACAATTGAATCCGCATTCTCTTACACTCTTGAGTGGATTCCTTGCTGTCATATCA
GTCAATGTTGTCATTGCTATTTATATTATCATGGCAATGAAAGAACCCTCTAGTAAACATGAACCGGATCCTGCATTTGTTGCCGAGGCAAAAGCTAGTATAAAC
CAGTCTCCTGGGAAAGCAGAGGACCCCTCACAGGCCAATAATAAGAAGGAAGAATAG
Protein sequenceShow/hide protein sequence
MRVITFLSKYSSGPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQSPGKAEDPSQANNKKEE