; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G014850 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G014850
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionVQ domain-containing protein
Genome locationCmo_Chr03:10642139..10642669
RNA-Seq ExpressionCmoCh03G014850
SyntenyCmoCh03G014850
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039609 - VQ motif-containing protein 15/22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581510.1 hypothetical protein SDJN03_21512, partial [Cucurbita argyrosperma subsp. sororia]2.2e-9398.3Show/hide
Query:  MSISSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN
        MSISSSSDQWRAQFYTHGGAPSST VPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN
Subjt:  MSISSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN

Query:  NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGNGYLA
        NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAEL+EIQNLIDEDLNYDLEELGMEFCSS+GNGNGYLA
Subjt:  NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGNGYLA

XP_008441071.1 PREDICTED: uncharacterized protein LOC103485295 [Cucumis melo]6.7e-5870.06Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HGGA +S+ V    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN
        +  HNNHPSVMLPFSDGR  Q R+ P E   P+   + GFS   AEL+EI+NLIDEDL+YDL+ELGMEF SS+GNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN

XP_022977817.1 uncharacterized protein LOC111478005 isoform X1 [Cucurbita maxima]6.2e-8896.51Show/hide
Query:  MSI-SSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFH
        MSI SSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSH+GPVNLSFGQAGDEFH
Subjt:  MSI-SSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFH

Query:  NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNG
        NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRG SGA AEL+EIQNLIDEDLNYDLEELGMEFC SNGNG
Subjt:  NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNG

XP_023544848.1 uncharacterized protein LOC111804320 [Cucurbita pepo subsp. pepo]5.1e-9096.57Show/hide
Query:  MSISSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN
        MSISSSSDQWRAQFYT GGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN
Subjt:  MSISSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHN

Query:  NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGNGYL
        NHPSVMLPFSDGRHFQLR+TPREHGVPIPQG RGF GAAAEL+EIQNLIDEDLNYDLEELGMEF SSNGNGNGYL
Subjt:  NHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGNGYL

XP_038881626.1 VQ motif-containing protein 22-like [Benincasa hispida]6.4e-6174.29Show/hide
Query:  ISSSSDQWRAQFY--THGGAPSSTTVPRDAP--NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDE-
        +S +SDQW +QFY   HGGA  S+      P  N NSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGF AAGA +P GSHKGPVNLSFGQAGD+ 
Subjt:  ISSSSDQWRAQFY--THGGAPSSTTVPRDAP--NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDE-

Query:  FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN
         HNNH SVMLPFSDG+ FQLR+T  EH  PIP  N GFS  AAEL+EIQNLIDED NYDL+ELGMEF SS+GNGN
Subjt:  FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN

TrEMBL top hitse value%identityAlignment
A0A0A0KII5 VQ domain-containing protein4.2e-5870.72Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HGG  +S+ V    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRE--TPREHGVPIPQGNRGFS--GAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN
        +  HNNHPSVMLPFSDG   Q R+  TP EH  P+P  + GFS  GAA +L+EIQNLIDEDL+YDL+ELGMEFCSS+GNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRE--TPREHGVPIPQGNRGFS--GAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN

A0A1S3B3C3 uncharacterized protein LOC1034852953.2e-5870.06Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HGGA +S+ V    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN
        +  HNNHPSVMLPFSDGR  Q R+ P E   P+   + GFS   AEL+EI+NLIDEDL+YDL+ELGMEF SS+GNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN

A0A5D3CPL3 VQ domain-containing protein9.4e-5869.49Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HG A +S+ V    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN
        +  HNNHPSVMLPFSDGR  Q R+ P E   P+   + GFS   AEL+EI+NLIDEDL+YDL+ELGMEF SS+GNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN

A0A6J1IJI1 uncharacterized protein LOC111478005 isoform X13.0e-8896.51Show/hide
Query:  MSI-SSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFH
        MSI SSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSH+GPVNLSFGQAGDEFH
Subjt:  MSI-SSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFH

Query:  NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNG
        NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRG SGA AEL+EIQNLIDEDLNYDLEELGMEFC SNGNG
Subjt:  NNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNG

E5GCL8 VQ domain-containing protein3.2e-5870.06Show/hide
Query:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD
        +S +SDQW  QFY   +HGGA +S+ V    P   N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGFHAAGA +P GSHKGPVNLSFGQ GD
Subjt:  ISSSSDQWRAQFY---THGGAPSSTTVPRDAP---NNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD

Query:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN
        +  HNNHPSVMLPFSDGR  Q R+ P E   P+   + GFS   AEL+EI+NLIDEDL+YDL+ELGMEF SS+GNGN
Subjt:  E-FHNNHPSVMLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGN

SwissProt top hitse value%identityAlignment
Q9LIE6 VQ motif-containing protein 226.2e-0657.14Show/hide
Query:  RDAPNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS
        R +P    ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A   FGS
Subjt:  RDAPNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS

Arabidopsis top hitse value%identityAlignment
AT1G35830.1 VQ motif-containing protein4.4e-0746.77Show/hide
Query:  PSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS
        P     P   P  +S   PR+R+RASR+APTT+L   T+NFR +VQ+FTG  A+    PF S
Subjt:  PSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS

AT3G22160.1 VQ motif-containing protein4.4e-0757.14Show/hide
Query:  RDAPNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS
        R +P    ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A   FGS
Subjt:  RDAPNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS

AT4G15120.1 VQ motif-containing protein3.0e-0843.62Show/hide
Query:  ISSSSDQWRAQFYTH--------GGAPSSTTVPRDA-----PNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS
        +++S++ W +QFY +            ++TT    A     P+N  ++KP RRRSRASR+ PTTL N  TANFR +VQQFTG  +A   V FGS
Subjt:  ISSSSDQWRAQFYTH--------GGAPSSTTVPRDA-----PNNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGS

AT4G20000.1 VQ motif-containing protein2.0e-0762.26Show/hide
Query:  RRSRASRKA-PTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFG
        RRSRASR+A PTTLLNA+ +NFR LVQ+FTG  A G        KGPV L FG
Subjt:  RRSRASRKA-PTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFG

AT4G39720.1 VQ motif-containing protein4.8e-0637.08Show/hide
Query:  PNNN--SISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVN-------LSFGQAGDEFHNNHPSVMLPFS
        P NN   I K ++RSRASR+APTT+L   T+NFR +VQ+FTG  A     P  ++   VN       L    +    +N +  ++ PF+
Subjt:  PNNN--SISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVN-------LSFGQAGDEFHNNHPSVMLPFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATCAGCAGCAGCAGCGATCAGTGGAGGGCCCAATTCTACACCCACGGCGGCGCGCCTTCCTCTACCACTGTCCCACGCGACGCTCCCAATAACAACTCC
ATTTCCAAGCCCAGACGCCGCTCCAGGGCTTCGCGGAAGGCGCCGACCACGCTGCTCAACGCCAGCACCGCCAATTTCAGGGACTTGGTGCAGCAGTTCACGGGG
TTTCATGCCGCCGGCGCCGTCGTGCCTTTCGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGGCAGGCTGGAGATGAGTTCCATAACAACCACCCCTCTGTG
ATGCTCCCTTTCTCGGATGGGCGCCATTTTCAGCTCCGTGAGACGCCGAGGGAGCACGGGGTCCCCATCCCGCAGGGGAATCGTGGGTTTTCAGGGGCGGCGGCG
GAACTCGTGGAAATTCAAAATCTGATTGATGAGGATTTGAATTACGATCTGGAGGAATTGGGTATGGAGTTCTGTTCTTCCAATGGGAATGGGAATGGGTACTTG
GCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATCAGCAGCAGCAGCGATCAGTGGAGGGCCCAATTCTACACCCACGGCGGCGCGCCTTCCTCTACCACTGTCCCACGCGACGCTCCCAATAACAACTCC
ATTTCCAAGCCCAGACGCCGCTCCAGGGCTTCGCGGAAGGCGCCGACCACGCTGCTCAACGCCAGCACCGCCAATTTCAGGGACTTGGTGCAGCAGTTCACGGGG
TTTCATGCCGCCGGCGCCGTCGTGCCTTTCGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGGCAGGCTGGAGATGAGTTCCATAACAACCACCCCTCTGTG
ATGCTCCCTTTCTCGGATGGGCGCCATTTTCAGCTCCGTGAGACGCCGAGGGAGCACGGGGTCCCCATCCCGCAGGGGAATCGTGGGTTTTCAGGGGCGGCGGCG
GAACTCGTGGAAATTCAAAATCTGATTGATGAGGATTTGAATTACGATCTGGAGGAATTGGGTATGGAGTTCTGTTCTTCCAATGGGAATGGGAATGGGTACTTG
GCTTGA
Protein sequenceShow/hide protein sequence
MSISSSSDQWRAQFYTHGGAPSSTTVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGDEFHNNHPSV
MLPFSDGRHFQLRETPREHGVPIPQGNRGFSGAAAELVEIQNLIDEDLNYDLEELGMEFCSSNGNGNGYLA