| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6599859.1 Sm-like protein LSM36B, partial [Cucurbita argyrosperma subsp. sororia] | 1.7e-83 | 87.83 | Show/hide |
Query: MHVSVDVVLVYLSLLWVVVIMEIFWWLFAVSFCNLKIGEMQTGFTGQPLRLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
MHVSVDVVLVYLSLLWVVVIMEIFWWLFAVSFCNLKIGEM + I +++PSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
Subjt: MHVSVDVVLVYLSLLWVVVIMEIFWWLFAVSFCNLKIGEMQTGFTGQPLRLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
Query: GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| KAG6600796.1 Eukaryotic translation initiation factor 2 subunit 3, Y-linked, partial [Cucurbita argyrosperma subsp. sororia] | 9.7e-47 | 67.72 | Show/hide |
Query: LKIGEMQTGFTGQPL---RLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSG
L IG M TG G+ + R ++ ++++ + + ++ + S RG + DRRKPEMSIGGEKGS STKTPADFLKSIRG PVVVKLNSG
Subjt: LKIGEMQTGFTGQPL---RLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSG
Query: VDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
VDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: VDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| XP_022942160.1 sm-like protein LSM36B isoform X1 [Cucurbita moschata] | 1.3e-43 | 100 | Show/hide |
Query: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| XP_022988243.1 uncharacterized protein LOC111485552 [Cucurbita maxima] | 4.6e-81 | 86.24 | Show/hide |
Query: MHVSVDVVLVYLSLLWVVVIMEIFWWLFAVSFCNLKIGEMQTGFTGQPLRLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
MHVSVDVVLVYL+LLWVVVIMEIFWWLFAVSFCNLKI EM + I ++ PSYRYA SVFLFLIHLRSQQLRGISTPDRRKPEMSI
Subjt: MHVSVDVVLVYLSLLWVVVIMEIFWWLFAVSFCNLKIGEMQTGFTGQPLRLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
Query: GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| XP_023539899.1 uncharacterized protein LOC111800438 [Cucurbita pepo subsp. pepo] | 1.1e-79 | 85.19 | Show/hide |
Query: MHVSVDVVLVYLSLLWVVVIMEIFWWLFAVSFCNLKIGEMQTGFTGQPLRLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
MHVSVDVVLVYL+LLWVVV ME FWWLFAVSFCNLKI EM + I +++PSYR ALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
Subjt: MHVSVDVVLVYLSLLWVVVIMEIFWWLFAVSFCNLKIGEMQTGFTGQPLRLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
Query: GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KSS9 Sm domain-containing protein | 5.4e-43 | 98.91 | Show/hide |
Query: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
MSIGGEKGSASTKTPADFLKSIRG PVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| A0A1S3CBJ6 sm-like protein LSM36B | 5.4e-43 | 98.91 | Show/hide |
Query: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
MSIGGEKGSASTKTPADFLKSIRG PVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| A0A6J1DNH0 sm-like protein LSM36B | 5.4e-43 | 98.91 | Show/hide |
Query: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
MSIGGEKGSASTKTPADFLKSIRG PVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| A0A6J1FVQ8 sm-like protein LSM36B isoform X1 | 6.3e-44 | 100 | Show/hide |
Query: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| A0A6J1JLP5 uncharacterized protein LOC111485552 | 2.2e-81 | 86.24 | Show/hide |
Query: MHVSVDVVLVYLSLLWVVVIMEIFWWLFAVSFCNLKIGEMQTGFTGQPLRLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
MHVSVDVVLVYL+LLWVVVIMEIFWWLFAVSFCNLKI EM + I ++ PSYRYA SVFLFLIHLRSQQLRGISTPDRRKPEMSI
Subjt: MHVSVDVVLVYLSLLWVVVIMEIFWWLFAVSFCNLKIGEMQTGFTGQPLRLIDNIYKVLNVENNPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSI
Query: GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
Subjt: GGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8NHT8 U6 snRNA-associated Sm-like protein LSm6 | 1.4e-24 | 73.97 | Show/hide |
Query: TKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSK
T +P DFLK + G VVV+L SGVDYRGIL+CLDGYMNIAMEQTEE VNG++ N+YGDAFIRGNNVLYIS +
Subjt: TKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSK
|
|
| O22823 Sm-like protein LSM36B | 5.0e-38 | 84.62 | Show/hide |
Query: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
MS GEK S +TKTPADFLKSIRG PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNGQLKN YGDAF+RGNNVLYIST+K TL++G+
Subjt: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
|
|
| P62312 U6 snRNA-associated Sm-like protein LSm6 | 2.4e-32 | 83.54 | Show/hide |
Query: SASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTL
S +TP+DFLK I G PVVVKLNSGVDYRG+LACLDGYMNIA+EQTEEYVNGQLKNKYGDAFIRGNNVLYIST KR +
Subjt: SASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTL
|
|
| P62313 U6 snRNA-associated Sm-like protein LSm6 | 2.4e-32 | 83.54 | Show/hide |
Query: SASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTL
S +TP+DFLK I G PVVVKLNSGVDYRG+LACLDGYMNIA+EQTEEYVNGQLKNKYGDAFIRGNNVLYIST KR +
Subjt: SASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTL
|
|
| Q9M1Z3 Sm-like protein LSM6A | 2.1e-36 | 86.05 | Show/hide |
Query: EKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
EK S +TKTPADFLKSIRG PVVVKLNSGVDYRG L CLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYIST T+A+G+
Subjt: EKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G43810.1 Small nuclear ribonucleoprotein family protein | 3.6e-39 | 84.62 | Show/hide |
Query: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
MS GEK S +TKTPADFLKSIRG PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNGQLKN YGDAF+RGNNVLYIST+K TL++G+
Subjt: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
|
|
| AT2G43810.2 Small nuclear ribonucleoprotein family protein | 3.6e-39 | 84.62 | Show/hide |
Query: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
MS GEK S +TKTPADFLKSIRG PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNGQLKN YGDAF+RGNNVLYIST+K TL++G+
Subjt: MSIGGEKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
|
|
| AT3G59810.1 Small nuclear ribonucleoprotein family protein | 1.5e-37 | 86.05 | Show/hide |
Query: EKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
EK S +TKTPADFLKSIRG PVVVKLNSGVDYRG L CLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYIST T+A+G+
Subjt: EKGSASTKTPADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGS
|
|
| AT4G30220.1 small nuclear ribonucleoprotein F | 6.8e-14 | 48.48 | Show/hide |
Query: PADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYI
P FL ++ G V+VKL G++Y+G LA +D YMN+ + TEEY++GQL G+ IR NNVLY+
Subjt: PADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYI
|
|
| AT4G30220.2 small nuclear ribonucleoprotein F | 6.8e-14 | 48.48 | Show/hide |
Query: PADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYI
P FL ++ G V+VKL G++Y+G LA +D YMN+ + TEEY++GQL G+ IR NNVLY+
Subjt: PADFLKSIRGHPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYI
|
|
