; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G000120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G000120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUvrD-helicase domain-containing protein
Genome locationCmo_Chr04:73893..74518
RNA-Seq ExpressionCmoCh04G000120
SyntenyCmoCh04G000120
Gene Ontology termsGO:0004386 - helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599861.1 TPR and ankyrin repeat-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]4.5e-6285.39Show/hide
Query:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP
        +++ +E   +L     ++MDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILS+ LLLLLHDDP
Subjt:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP

Query:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS
        EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKG GNGNG GNGKGNG G GNGKGNGK  G GKGKGKSKN+KRGKGRRS
Subjt:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS

KAG7030546.1 TPR and ankyrin repeat-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-6888.76Show/hide
Query:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP
        +++ +E   +L     ++MDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP
Subjt:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP

Query:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS
        EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKG GNGNG GNGKGNG G GNGKGNGKGNGNGKGKGKSKNNKRGKGRRS
Subjt:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS

XP_022942070.1 uncharacterized protein LOC111447259 isoform X1 [Cucurbita moschata]6.7e-5878.65Show/hide
Query:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP
        +++ +E   +L     ++MDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP
Subjt:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP

Query:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS
        EVEVDQRSIDDQDCEGGKAEAVLDKKGK                      GKGNGKGNGNGKGKGKSKNNKRGKGRRS
Subjt:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS

XP_023517638.1 uncharacterized protein LOC111781335 [Cucurbita pepo subsp. pepo]2.8e-5676.97Show/hide
Query:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP
        +++ +E   +L   L ++MDVERWVKHLSAARSKADEEIRFEVVDGLV+ELNLLSTALSMSDPKENVSQVVSISK VYSRRMELEPILS+LLLLLLHDDP
Subjt:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP

Query:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS
        EVEVDQRSIDDQDCEGGKAEAVLDKKGK                      GKGNGKGNG GKGKGKSKNNKRGKGRRS
Subjt:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS

XP_038877003.1 uncharacterized protein LOC120069339 isoform X2 [Benincasa hispida]2.1e-1946.78Show/hide
Query:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP
        +++ I+    L     ++MDVE+W++HL+AARSK+++EI FE +DGL+ +LNLLSTALSMS+P+ENV+Q + ISKS+YSRRM+LEP+L++    LL DDP
Subjt:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP

Query:  EVEVDQ----RSIDD-----QDC-----------EGGKAEAVL----DKKGKGKGKGNGNGNG-NGKGNGK
        ++EV Q    ++++D     QDC           E  KAE  L    DKKGKGK K  G G    GK   K
Subjt:  EVEVDQ----RSIDD-----QDC-----------EGGKAEAVL----DKKGKGKGKGNGNGNG-NGKGNGK

TrEMBL top hitse value%identityAlignment
A0A0A0KMH5 UvrD-helicase domain-containing protein4.8e-1747.86Show/hide
Query:  LQMDVERWVKHLSAARSK-ADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDPEVEVDQRS-------
        ++MDV++WV+HL+AA+SK A++E+  E VDGL+ EL LLSTALSMS P+EN ++V+SISKS+Y RR EL  I S     LL DDPE+EV Q S       
Subjt:  LQMDVERWVKHLSAARSK-ADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDPEVEVDQRS-------

Query:  ----------IDDQDC------EGGKAEAVLDKKGKGKGK
                     ++C      +  K E VL +KGKGKGK
Subjt:  ----------IDDQDC------EGGKAEAVLDKKGKGKGK

A0A1S3CD94 uncharacterized protein LOC1034991088.1e-1747.92Show/hide
Query:  LQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDPEVEVDQRS--------
        ++MDV++W++HL+AA+S  ++EI  E VDGL+ EL+LLSTALSMS P+ENV+QV+SISKS+YSRR ELE I ++    LL+DDPE+EV Q S        
Subjt:  LQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDPEVEVDQRS--------

Query:  -IDDQDC-----------EGGKAEAVLDKKGKGKGKGNGNGNGN
         I + DC           E  K E VL +    KGKG      N
Subjt:  -IDDQDC-----------EGGKAEAVLDKKGKGKGKGNGNGNGN

A0A5A7SXD0 UvrD-like helicase ATP-binding domain-containing protein7.6e-1547.22Show/hide
Query:  LQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDPEVEVDQRS--------
        ++MDV++W++HL+AA+S  ++EI  E VDGL+ EL+LLSTALSMS P+ENV+QV+SISKS+YS R ELE I ++    LL+DDPE+EV Q S        
Subjt:  LQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDPEVEVDQRS--------

Query:  -IDDQDC-----------EGGKAEAVLDKKGKGKGKGNGNGNGN
         I + DC           E  K E VL +    KGKG      N
Subjt:  -IDDQDC-----------EGGKAEAVLDKKGKGKGKGNGNGNGN

A0A5D3E4B5 Uncharacterized protein8.1e-1747.92Show/hide
Query:  LQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDPEVEVDQRS--------
        ++MDV++W++HL+AA+S  ++EI  E VDGL+ EL+LLSTALSMS P+ENV+QV+SISKS+YSRR ELE I ++    LL+DDPE+EV Q S        
Subjt:  LQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDPEVEVDQRS--------

Query:  -IDDQDC-----------EGGKAEAVLDKKGKGKGKGNGNGNGN
         I + DC           E  K E VL +    KGKG      N
Subjt:  -IDDQDC-----------EGGKAEAVLDKKGKGKGKGNGNGNGN

A0A6J1FVI8 uncharacterized protein LOC111447259 isoform X13.3e-5878.65Show/hide
Query:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP
        +++ +E   +L     ++MDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP
Subjt:  MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDP

Query:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS
        EVEVDQRSIDDQDCEGGKAEAVLDKKGK                      GKGNGKGNGNGKGKGKSKNNKRGKGRRS
Subjt:  EVEVDQRSIDDQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATGTAATTGAAAACAACATATCCCTTTTGCGTGGCTTATTGTTGCAGATGGATGTGGAGAGATGGGTTAAGCATTTAAGTGCCGCAAGAAGCAAAGCGGATGA
GGAGATTCGTTTTGAAGTAGTGGATGGGTTGGTTGTGGAATTAAATTTACTATCTACTGCTTTAAGCATGAGCGATCCCAAGGAAAATGTATCTCAAGTGGTATCGATAT
CAAAGAGCGTCTATTCGAGGAGGATGGAGTTGGAGCCTATCTTGAGTGAACTACTACTACTACTACTACATGATGATCCTGAAGTGGAAGTGGATCAGAGGTCGATTGAT
GATCAAGATTGTGAAGGAGGAAAAGCTGAGGCTGTTTTGGATAAGAAGGGGAAAGGGAAAGGGAAAGGGAATGGGAATGGGAATGGGAATGGGAAAGGGAACGGGAAAGG
GAACGGGAATGGGAAAGGGAACGGGAAAGGGAACGGGAATGGGAAAGGGAAAGGGAAGTCAAAGAACAACAAGAGGGGAAAGGGTCGTAGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATGTAATTGAAAACAACATATCCCTTTTGCGTGGCTTATTGTTGCAGATGGATGTGGAGAGATGGGTTAAGCATTTAAGTGCCGCAAGAAGCAAAGCGGATGA
GGAGATTCGTTTTGAAGTAGTGGATGGGTTGGTTGTGGAATTAAATTTACTATCTACTGCTTTAAGCATGAGCGATCCCAAGGAAAATGTATCTCAAGTGGTATCGATAT
CAAAGAGCGTCTATTCGAGGAGGATGGAGTTGGAGCCTATCTTGAGTGAACTACTACTACTACTACTACATGATGATCCTGAAGTGGAAGTGGATCAGAGGTCGATTGAT
GATCAAGATTGTGAAGGAGGAAAAGCTGAGGCTGTTTTGGATAAGAAGGGGAAAGGGAAAGGGAAAGGGAATGGGAATGGGAATGGGAATGGGAAAGGGAACGGGAAAGG
GAACGGGAATGGGAAAGGGAACGGGAAAGGGAACGGGAATGGGAAAGGGAAAGGGAAGTCAAAGAACAACAAGAGGGGAAAGGGTCGTAGGAGTTGA
Protein sequenceShow/hide protein sequence
MKHVIENNISLLRGLLLQMDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVYSRRMELEPILSELLLLLLHDDPEVEVDQRSID
DQDCEGGKAEAVLDKKGKGKGKGNGNGNGNGKGNGKGNGNGKGNGKGNGNGKGKGKSKNNKRGKGRRS