CuGenDBv2

Gene ID	CmoCh04G000410
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Genome location	Cmo_Chr04:242301..244311
RNA-Seq Expression	CmoCh04G000410
Synteny	CmoCh04G000410
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6599887.1 hypothetical protein SDJN03_05120, partial [Cucurbita argyrosperma subsp. sororia]

5.6e-64

100

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYHSQYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

XP_004149132.1 uncharacterized protein LOC101204884 [Cucumis sativus]

1.5e-61

94.26

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        M LYYGAKE+LKIQKFRR+VSYTGFYLF SVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFE+EEWGPIEFC+MAKHF+RQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYHSQYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

XP_022942452.1 uncharacterized protein LOC111447487 [Cucurbita moschata]

5.6e-64

100

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYHSQYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

XP_022976595.1 uncharacterized protein LOC111476941 [Cucurbita maxima]

4.8e-63

99.18

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        M LYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYHSQYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

XP_038893132.1 uncharacterized protein LOC120082001 [Benincasa hispida]

5.8e-61

95.08

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        M LYYGAKE+LKIQKFRR+VSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEF +M+KHFERQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYHSQYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPE6 Uncharacterized protein

7.4e-62

94.26

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        M LYYGAKE+LKIQKFRR+VSYTGFYLF SVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFE+EEWGPIEFC+MAKHF+RQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYHSQYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

A0A6J1D9J7 uncharacterized protein LOC111018291 isoform X2

2.8e-61

94.26

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        M LYYGAKE+LKIQKFRR+VSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNCFE EEWGPIEFC+MAKHFERQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYH+QYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

A0A6J1DA58 uncharacterized protein LOC111018291 isoform X1

2.8e-61

94.26

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        M LYYGAKE+LKIQKFRR+VSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNCFE EEWGPIEFC+MAKHFERQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYH+QYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

A0A6J1FUV5 uncharacterized protein LOC111447487

2.7e-64

100

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYHSQYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

A0A6J1IJX1 uncharacterized protein LOC111476941

2.3e-63

99.18

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Query:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
        M LYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS
Subjt:  MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKS

Query:  PYAYHSQYMAHLLSHGQLDGSG
        PYAYHSQYMAHLLSHGQLDGSG
Subjt:  PYAYHSQYMAHLLSHGQLDGSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G14990.1 unknown protein

3.7e-53

81.58

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Query:  EVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHSQY
        EV+KIQK RR VSY GFY F + L++ YT+NTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNC+E E+WGP+EFC+MAKHF+RQGKSPY YHSQY
Subjt:  EVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHSQY

Query:  MAHLLSHGQLDGSG
        MAHLLS GQLDGSG
Subjt:  MAHLLSHGQLDGSG

AT1G14990.2 unknown protein

9.9e-51

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Query:  EVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHS--
        EV+KIQK RR VSY GFY F + L++ YT+NTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNC+E E+WGP+EFC+MAKHF+RQGKSPY YHS  
Subjt:  EVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHS--

Query:  --------QYMAHLLSHGQLDGSG
                QYMAHLLS GQLDGSG
Subjt:  --------QYMAHLLSHGQLDGSG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGCTGTATTACGGAGCTAAAGAGGTCCTAAAGATTCAAAAGTTTCGAAGACTTGTGTCCTATACTGGATTCTATCTCTTCGTTTCCGTTTTGAGTTACGCTTATAC
AAGCAATACAACTAGAGCTGGATATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACTACGAAGTTGTACAAAGCTGCTCTTG
GGAATTGTTTTGAAATAGAAGAATGGGGTCCAATTGAATTCTGCGTCATGGCTAAACATTTTGAACGTCAAGGAAAATCGCCTTATGCATATCATTCTCAATACATGGCA
CATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAG

mRNA sequence

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CGGGAAAGGGGGTCTGAAGCCGCAACTTCGAACCGTCTCCCTTGCGAGTTCCGAGCCCCTAATCGCTCCTAAATTCTCACTAATTCTCAGCTCCCTTTCTTCGGTTTCCC
CTCGCCACCGATCTCTCTCTCGAATCTTACTCGGCTGCTTCCACTTCTAGGTTCGTTCACGATTCGATTTTGATATGGGGCTGTATTACGGAGCTAAAGAGGTCCTAAAG
ATTCAAAAGTTTCGAAGACTTGTGTCCTATACTGGATTCTATCTCTTCGTTTCCGTTTTGAGTTACGCTTATACAAGCAATACAACTAGAGCTGGATATTCTCGAGGGGA
TCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACTACGAAGTTGTACAAAGCTGCTCTTGGGAATTGTTTTGAAATAGAAGAATGGGGTCCAATTG
AATTCTGCGTCATGGCTAAACATTTTGAACGTCAAGGAAAATCGCCTTATGCATATCATTCTCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGG
TAGGAAAACACCAATCAACAACCAAAGAGCTTTGAGACTGTTTACTACCATGATGGGGCTGCGCACTTCAATACTAAAATTCTAATTTTTTGAAATTGAAGCATTGTTGT
AGGTTTGAGCATAGATAGCTCAATTGATCATGATTACACGAATAACTTCACTTATGGGTCTTAGGTTCGAATCATCGCCCCTTTGTTTGATTTGTATTATTCTTTGAATA
TATATGGATCGGCTGTTAGGCATTGTATGTTACTAATTATACCAGAACATAAATAAGACTTGATCTTCCCCTCTTC

Protein sequence

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MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHSQYMA
HLLSHGQLDGSG

CmoCh04G000410 (gene) of Cucurbita moschata (Rifu) v1 genome