; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G000820 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G000820
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbinding partner of ACD11 1-like isoform X2
Genome locationCmo_Chr04:444778..447026
RNA-Seq ExpressionCmoCh04G000820
SyntenyCmoCh04G000820
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599926.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-13891.75Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQ                         RETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
        VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ

Query:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
        VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
Subjt:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS

Query:  ADR
        ADR
Subjt:  ADR

XP_022941586.1 binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]1.1e-13791.39Show/hide
Query:  QMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALV
        +MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQ                         RETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALV
Subjt:  QMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALV

Query:  ENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV
        ENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV
Subjt:  ENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV

Query:  SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSA
        SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSA
Subjt:  SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSA

Query:  DR
        DR
Subjt:  DR

XP_022941587.1 binding partner of ACD11 1-like isoform X2 [Cucurbita moschata]1.8e-15699.67Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        M MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
        VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ

Query:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
        VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
Subjt:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS

Query:  ADR
        ADR
Subjt:  ADR

XP_022941588.1 binding partner of ACD11 1-like isoform X3 [Cucurbita moschata]3.9e-13891.42Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        M MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQ                         RETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
        VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ

Query:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
        VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
Subjt:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS

Query:  ADR
        ADR
Subjt:  ADR

XP_022996222.1 binding partner of ACD11 1-like isoform X1 [Cucurbita maxima]1.3e-14996.7Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        M MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILF + + L +KKH EEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
        VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGI EKITAGTAVVNEKVREMDEKFQ
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ

Query:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
        VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
Subjt:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS

Query:  ADR
        ADR
Subjt:  ADR

TrEMBL top hitse value%identityAlignment
A0A6J1FLI4 binding partner of ACD11 1-like isoform X15.4e-13891.39Show/hide
Query:  QMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALV
        +MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQ                         RETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALV
Subjt:  QMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALV

Query:  ENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV
        ENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV
Subjt:  ENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV

Query:  SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSA
        SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSA
Subjt:  SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSA

Query:  DR
        DR
Subjt:  DR

A0A6J1FMX0 binding partner of ACD11 1-like isoform X28.9e-15799.67Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        M MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
        VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ

Query:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
        VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
Subjt:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS

Query:  ADR
        ADR
Subjt:  ADR

A0A6J1FSI4 binding partner of ACD11 1-like isoform X31.9e-13891.42Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        M MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQ                         RETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
        VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ

Query:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
        VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
Subjt:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS

Query:  ADR
        ADR
Subjt:  ADR

A0A6J1K1B6 binding partner of ACD11 1-like isoform X16.2e-15096.7Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        M MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILF + + L +KKH EEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
        VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGI EKITAGTAVVNEKVREMDEKFQ
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ

Query:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
        VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
Subjt:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS

Query:  ADR
        ADR
Subjt:  ADR

A0A6J1K671 binding partner of ACD11 1-like isoform X29.3e-13891.09Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        M MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQ                         RETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ
        VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGI EKITAGTAVVNEKVREMDEKFQ
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQ

Query:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
        VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS
Subjt:  VSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNS

Query:  ADR
        ADR
Subjt:  ADR

SwissProt top hitse value%identityAlignment
Q9LFD5 Binding partner of ACD11 12.1e-5445.1Show/hide
Query:  QMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALV
        Q+R+VKV N+S   +E DI+EFFSFSGE+  +++Q                             N   AYVT+K++QGA+TA+LL+GA I D SV I L 
Subjt:  QMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALV

Query:  ENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV
         NY  PP A  +  + + +   +   +AEDVVS+MLAKGFILGKDAV KAKAFDE+H  TS A+A V S+D+K+G+++K+TAGT++VNEK++ +D+ FQV
Subjt:  ENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV

Query:  SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE
        +E+TKS  A AEQ  SSAG+A+M N YV TG +W + A   V +AA EV Q TK   EK E E+     + +  +   ++ +H  E
Subjt:  SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE

Arabidopsis top hitse value%identityAlignment
AT1G67950.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.6e-6550.34Show/hide
Query:  MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALVE
        ++TVK+SN+S   S++D++EFFSFSG+I YVEM+                          ET+ +QVAYVT+KDSQGA+TA+LLTGA I DL V+I    
Subjt:  MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALVE

Query:  NYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVS
        NY LPPEA++  LD   +  G +  +AEDVV+ M+ +G+ LGKDA+ KAKAFD+RH L SNASAT+ S+D KMG++EK++ GT VVNEK+R++DE++QV 
Subjt:  NYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVS

Query:  EKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV
        E TKSALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  EKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV

AT1G67950.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.6e-6550.34Show/hide
Query:  MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALVE
        ++TVK+SN+S   S++D++EFFSFSG+I YVEM+                          ET+ +QVAYVT+KDSQGA+TA+LLTGA I DL V+I    
Subjt:  MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALVE

Query:  NYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVS
        NY LPPEA++  LD   +  G +  +AEDVV+ M+ +G+ LGKDA+ KAKAFD+RH L SNASAT+ S+D KMG++EK++ GT VVNEK+R++DE++QV 
Subjt:  NYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVS

Query:  EKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV
        E TKSALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  EKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV

AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.1e-6450.17Show/hide
Query:  MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALVE
        ++TVK+SN+S   S++D++EFFSFSG+I YVEM+                          ET+ +QVAYVT+KDSQGA+TA+LLTGA I DL V+I    
Subjt:  MRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALVE

Query:  NYHLPPEAMSSILDKRQ-TVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV
        NY LPPEA++  LD ++ +  G +  +AEDVV+ M+ +G+ LGKDA+ KAKAFD+RH L SNASAT+ S+D KMG++EK++ GT VVNEK+R++DE++QV
Subjt:  NYHLPPEAMSSILDKRQ-TVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQV

Query:  SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV
         E TKSALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  SEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-6851.89Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        M M TVKVSN+S   ++RD++EFFSFSG+ILY+E Q                          ETE T++AYVT+KD QGA+TA+LL+GA I D SV +++
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAPN----QAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMD
          +Y L PEA++S+  K    +  A +    +AEDVVS+MLAKGFILGKDA+ KAK+ DE+HQLTS ASA V S D+K+G T+KI  GT VV EKVRE+D
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAPN----QAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMD

Query:  EKFQVSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE
        +K+QVSEKTKSA+A AEQ  S+AG+A+M N YV TGA W + A   V KAAEEV Q  K KV  AEEE K         +++ FA +HL E
Subjt:  EKFQVSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-6649.15Show/hide
Query:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL
        M M TVKVSN+S   +ERD++EFFSFSG+I Y+E Q                          E + +++AYVT+KD QGA+TA+LLTG+ I D SVT+ +
Subjt:  MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIAL

Query:  VENYHLPPEAMSSILDKRQTVTGNAP--------NQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKV
          +Y LPP+A++SI   +++   ++P         +AEDVVS M++KGF+LGKDA+ KAK+ DE+HQLTS ASA VTS D+++G TEKI  GT VV+EKV
Subjt:  VENYHLPPEAMSSILDKRQTVTGNAP--------NQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKV

Query:  REMDEKFQVSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE
        +E+D+KFQV+EKTKSA+A AEQ  S+AG+A+M N YV TGA W + A   V+KAAEEV Q  K KV  AEEE++     E+  +++  A +HL E
Subjt:  REMDEKFQVSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGAGAACTGTGAAGGTCAGCAATATCTCGAAGGCTACTTCGGAGAGAGATATTGAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATG
CAAAGGTTAGTGATTCTGTTCTATGTGTTGATTTATTTGAAGAAAAAAAAGCATGTTGAAGAATTTGATTTTGTTTGTAGAGAAACTGAAAATACTCAGGTTGCT
TATGTTACATACAAGGATTCTCAAGGAGCAGATACTGCAATTCTTTTGACAGGAGCAAAAATTGGTGATCTATCTGTAACAATTGCTCTGGTTGAGAATTATCAT
CTTCCACCAGAAGCAATGTCATCAATCCTGGATAAAAGGCAAACTGTTACTGGGAATGCTCCGAATCAGGCAGAAGACGTCGTAAGTACAATGCTTGCTAAGGGC
TTCATCTTGGGGAAGGATGCTGTCAACAAGGCAAAAGCGTTCGATGAACGGCACCAGTTGACATCGAATGCTTCTGCGACTGTCACGTCCATAGATCGCAAGATG
GGCATAACAGAGAAGATAACTGCAGGCACAGCAGTAGTAAATGAAAAGGTCAGGGAGATGGATGAAAAGTTCCAGGTTTCTGAAAAGACGAAATCCGCTCTCGCA
GTGGCCGAGCAGAAGGCAAGCAGTGCAGGAACTGCGCTCATGAGTAACTATTATGTGTTTACTGGAGCAGCATGGTTTTCAAATGCAGTAACTGCTGTTACAAAG
GCTGCTGAGGAAGTGACTCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGTATATACCGCGAAAGAACTGGGATCATCAACAACTTC
GCCGAGCTCCATCTCGACGAGCCATTACCAGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATGAGAACTGTGAAGGTCAGCAATATCTCGAAGGCTACTTCGGAGAGAGATATTGAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATG
CAAAGGTTAGTGATTCTGTTCTATGTGTTGATTTATTTGAAGAAAAAAAAGCATGTTGAAGAATTTGATTTTGTTTGTAGAGAAACTGAAAATACTCAGGTTGCT
TATGTTACATACAAGGATTCTCAAGGAGCAGATACTGCAATTCTTTTGACAGGAGCAAAAATTGGTGATCTATCTGTAACAATTGCTCTGGTTGAGAATTATCAT
CTTCCACCAGAAGCAATGTCATCAATCCTGGATAAAAGGCAAACTGTTACTGGGAATGCTCCGAATCAGGCAGAAGACGTCGTAAGTACAATGCTTGCTAAGGGC
TTCATCTTGGGGAAGGATGCTGTCAACAAGGCAAAAGCGTTCGATGAACGGCACCAGTTGACATCGAATGCTTCTGCGACTGTCACGTCCATAGATCGCAAGATG
GGCATAACAGAGAAGATAACTGCAGGCACAGCAGTAGTAAATGAAAAGGTCAGGGAGATGGATGAAAAGTTCCAGGTTTCTGAAAAGACGAAATCCGCTCTCGCA
GTGGCCGAGCAGAAGGCAAGCAGTGCAGGAACTGCGCTCATGAGTAACTATTATGTGTTTACTGGAGCAGCATGGTTTTCAAATGCAGTAACTGCTGTTACAAAG
GCTGCTGAGGAAGTGACTCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGTATATACCGCGAAAGAACTGGGATCATCAACAACTTC
GCCGAGCTCCATCTCGACGAGCCATTACCAGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAAACAGTAAGTTGTGCATCATATTCATGAAAGCAG
AAATCCTACACTTGTGAATTACTTTGCTTACCCATTTTGCTGTATGATATACATTTCATCTAGATGTTGAAATGTTGCGACATTTTTTTGAGTACAAAAAAATTA
CTTTTTGGATGCTTGATTGTATACCGTTTCACTTAACTAATGTAATTTGTAATTTACAAATATAGATTATTGTCTC
Protein sequenceShow/hide protein sequence
MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRLVILFYVLIYLKKKKHVEEFDFVCRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTIALVENYH
LPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKTKSALA
VAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR