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CmoCh04G000920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G000920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMicrotubule-associated protein futsch-like
Genome locationCmo_Chr04:490646..492178
RNA-Seq ExpressionCmoCh04G000920
SyntenyCmoCh04G000920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022943177.1 uncharacterized protein LOC111447987 isoform X1 [Cucurbita moschata]1.6e-66100Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

XP_022943178.1 uncharacterized protein LOC111447987 isoform X2 [Cucurbita moschata]1.6e-66100Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

XP_022994969.1 uncharacterized protein LOC111490565 isoform X1 [Cucurbita maxima]3.0e-6598.5Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVD LADGILDTLLPHL ELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

XP_022994970.1 uncharacterized protein LOC111490565 isoform X2 [Cucurbita maxima]3.0e-6598.5Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVD LADGILDTLLPHL ELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

XP_022994971.1 uncharacterized protein LOC111490565 isoform X3 [Cucurbita maxima]3.0e-6598.5Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVD LADGILDTLLPHL ELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

TrEMBL top hitse value%identityAlignment
A0A6J1FSA8 uncharacterized protein LOC111447987 isoform X17.7e-67100Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

A0A6J1FWH4 uncharacterized protein LOC111447987 isoform X27.7e-67100Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

A0A6J1K0Q2 uncharacterized protein LOC111490565 isoform X31.5e-6598.5Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVD LADGILDTLLPHL ELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

A0A6J1K2T3 uncharacterized protein LOC111490565 isoform X21.5e-6598.5Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVD LADGILDTLLPHL ELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

A0A6J1K4C6 uncharacterized protein LOC111490565 isoform X11.5e-6598.5Show/hide
Query:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
        MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVD LADGILDTLLPHL ELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK
Subjt:  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITK

Query:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
        TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK
Subjt:  TMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK

SwissProt top hitse value%identityAlignment
O80386 COP1-interacting protein 71.7e-0733.01Show/hide
Query:  LDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQL
        LDYA  Q+ P++ R +     G + + LA GI    + H   L+ ++ + SK    +    SS G  WFTK TL RF+  V +PE+ + + T+  E+ Q+
Subjt:  LDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQL

Query:  EET
        E++
Subjt:  EET

Arabidopsis top hitse value%identityAlignment
AT1G17360.1 BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1)2.8e-1334.48Show/hide
Query:  DGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMN-EM
        D  LDYA  ++ P  +R E F     + + LA G+++  + HL  ++   +K  ++S++L+   S  G +WFT+ TL RF+  V SPE+ +   T + EM
Subjt:  DGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMN-EM

Query:  AQLEETRRFHVSLYGQ
        +QLE  R    +LY Q
Subjt:  AQLEETRRFHVSLYGQ

AT1G72410.1 COP1-interacting protein-related7.7e-1134.48Show/hide
Query:  DGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPE-LTKITKTMNEM
        D  LDY   ++ P  ++ E F     + + LA G++   + HL  L+   +  +++SI+L+   S   + WFTK TL RF+  V SPE L K+    +EM
Subjt:  DGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPE-LTKITKTMNEM

Query:  AQLEETRRFHVSLYGQ
         QLE  R    +LY Q
Subjt:  AQLEETRRFHVSLYGQ

AT1G72410.2 COP1-interacting protein-related7.7e-1134.48Show/hide
Query:  DGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPE-LTKITKTMNEM
        D  LDY   ++ P  ++ E F     + + LA G++   + HL  L+   +  +++SI+L+   S   + WFTK TL RF+  V SPE L K+    +EM
Subjt:  DGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPE-LTKITKTMNEM

Query:  AQLEETRRFHVSLYGQ
         QLE  R    +LY Q
Subjt:  AQLEETRRFHVSLYGQ

AT3G14172.1 FUNCTIONS IN: molecular_function unknown1.3e-1333.87Show/hide
Query:  PLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMN-EMAQ
        PLDYA  Q+ P ++R E F       + LA G++   + HL   +E  ++E + SI+L+  ++     WFTK TL RF+  V +PE+ ++   ++ EM+Q
Subjt:  PLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMN-EMAQ

Query:  LEETRRFHVSLYGQSGAEFTSSAE
        LE  R+    +YG+  ++  SSA+
Subjt:  LEETRRFHVSLYGQSGAEFTSSAE

AT4G27430.1 COP1-interacting protein 71.2e-0833.01Show/hide
Query:  LDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQL
        LDYA  Q+ P++ R +     G + + LA GI    + H   L+ ++ + SK    +    SS G  WFTK TL RF+  V +PE+ + + T+  E+ Q+
Subjt:  LDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQL

Query:  EET
        E++
Subjt:  EET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATAGGGCATTTCTCCGTCTATGTTCTGCCTTGCTCCGTCATCCCCGGCCGGATTGCAAACCCCAGCTGATCGAAATGAGTGGTGGAGATGATGATGGGCCTTT
AGATTATGCCACCATTCAGATCATACCTTCTCAGAACAGATATGAGGCATTTGCTTGTTGTGGCAATAAGGTAGATGTTCTGGCTGATGGGATTCTGGATACCCTTTTGC
CACATTTACTGGAACTACAAGAGCTGAATGCCAAAGAATCTAAAGCGAGCATTAAACTCCAATCACCAGCTTCTTCAGCTGGTTCAGCATGGTTCACAAAATCTACTCTA
ACCAGGTTCCTCCATCTAGTTGGCTCGCCAGAGTTAACGAAAATCACGAAAACGATGAACGAGATGGCTCAACTAGAAGAAACCAGGAGATTTCATGTTTCTTTATATGG
TCAGTCTGGAGCTGAATTTACTTCATCAGCTGAATCTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATAGGGCATTTCTCCGTCTATGTTCTGCCTTGCTCCGTCATCCCCGGCCGGATTGCAAACCCCAGCTGATCGAAATGAGTGGTGGAGATGATGATGGGCCTTT
AGATTATGCCACCATTCAGATCATACCTTCTCAGAACAGATATGAGGCATTTGCTTGTTGTGGCAATAAGGTAGATGTTCTGGCTGATGGGATTCTGGATACCCTTTTGC
CACATTTACTGGAACTACAAGAGCTGAATGCCAAAGAATCTAAAGCGAGCATTAAACTCCAATCACCAGCTTCTTCAGCTGGTTCAGCATGGTTCACAAAATCTACTCTA
ACCAGGTTCCTCCATCTAGTTGGCTCGCCAGAGTTAACGAAAATCACGAAAACGATGAACGAGATGGCTCAACTAGAAGAAACCAGGAGATTTCATGTTTCTTTATATGG
TCAGTCTGGAGCTGAATTTACTTCATCAGCTGAATCTAAGTAG
Protein sequenceShow/hide protein sequence
MEDRAFLRLCSALLRHPRPDCKPQLIEMSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKESKASIKLQSPASSAGSAWFTKSTL
TRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYGQSGAEFTSSAESK