; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G001240 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G001240
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTRICHOME BIREFRINGENCE-LIKE 33
Genome locationCmo_Chr04:640740..641193
RNA-Seq ExpressionCmoCh04G001240
SyntenyCmoCh04G001240
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:1990937 - xylan acetylation (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:1990538 - xylan O-acetyltransferase activity (molecular function)
InterPro domainsIPR026057 - PC-Esterase
IPR029962 - Trichome birefringence-like family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022941846.1 protein trichome birefringence-like 33 isoform X1 [Cucurbita moschata]1.2e-61100Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DIMVFNTYLWWITGSNMKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

XP_022941850.1 protein trichome birefringence-like 33 isoform X2 [Cucurbita moschata]1.2e-61100Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DIMVFNTYLWWITGSNMKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

XP_022941851.1 protein trichome birefringence-like 33 isoform X3 [Cucurbita moschata]1.2e-61100Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DIMVFNTYLWWITGSNMKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

XP_022941852.1 protein trichome birefringence-like 33 isoform X4 [Cucurbita moschata]1.2e-61100Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DIMVFNTYLWWITGSNMKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

XP_023543095.1 protein trichome birefringence-like 33 isoform X3 [Cucurbita pepo subsp. pepo]2.4e-5995Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLE+LRGKRMMFVGDSLNRGQYVSMVCLLHSLI+DDAKSMETF SLT+FTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIV+RDSINKHGRHWK+V
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DIMVFNTYLWWITGSNMKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

TrEMBL top hitse value%identityAlignment
A0A6J1FM86 protein trichome birefringence-like 33 isoform X35.6e-62100Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DIMVFNTYLWWITGSNMKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

A0A6J1FNM2 protein trichome birefringence-like 33 isoform X45.6e-62100Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DIMVFNTYLWWITGSNMKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

A0A6J1FT88 protein trichome birefringence-like 33 isoform X15.6e-62100Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DIMVFNTYLWWITGSNMKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

A0A6J1FUZ1 protein trichome birefringence-like 33 isoform X25.6e-62100Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DIMVFNTYLWWITGSNMKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

A0A6J1K046 protein trichome birefringence-like 33 isoform X18.4e-5893.28Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        MMLE+LRGKRMMFVGDSLNRGQYVSMVCLLHSLI+DDAKSMETF SLT+FTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSI KHGRHWK  
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKI
        DIM+FNTYLWWITGSNMKI
Subjt:  DIMVFNTYLWWITGSNMKI

SwissProt top hitse value%identityAlignment
F4IH21 Protein trichome birefringence-like 339.5e-5175.83Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        +MLE+LRGKRMM+VGDSLNRG +VSM+CLLH LI +D KS++T  SLT+FTAKEYN TIEFYWAPFLLESNSD+A++HRISDR+VR+ SINKHGRHWK V
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DI++FNTYLWW+TG  M IL
Subjt:  DIMVFNTYLWWITGSNMKIL

Q8RXQ1 Protein trichome birefringence-like 351.5e-3562.73Show/hide
Query:  MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVD
        M E LRGKR+MFVGDSLNRGQ++SMVCLL S+I  D +SM     LTIF A++YN T+EF WAP L+ESNSD+ V HR+S+RI+R DS+ KH   W+  D
Subjt:  MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVD

Query:  IMVFNTYLWW
        I++FNTYLWW
Subjt:  IMVFNTYLWW

Q94K00 Protein trichome birefringence-like 281.4e-3355Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        ++LE LR KR+MFVGDSLNR Q+ SMVCL+ S+I    KS+    SLT+F  ++YN T+EFYWAPFL+ESNSD+   H I DRI+  +SI KHG +W  V
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        D +VFN+Y+WW+   ++K+L
Subjt:  DIMVFNTYLWWITGSNMKIL

Q9LY46 Protein ESKIMO 17.3e-3555.83Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        ++LE LR KRMMFVGDSLNR Q+ SMVCL+ S++    KS+    SL++F  ++YN T+EFYWAPFL+ESNSD+  +H I +RI+  +SI KHG +WK V
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        D +VFNTY+WW+    MK+L
Subjt:  DIMVFNTYLWWITGSNMKIL

Q9SRL3 Protein trichome birefringence-like 321.6e-5075.83Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        +MLESLRGK+MMFVGDSLNRG YVS++CLLHS I +++KSM+TF SLT+F+ K+YN TIEFYWAPFLLESNSDNA +HR+SDRIVR+ SINKHGRHW+  
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DI+VFNTYLWW TG  MKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

Arabidopsis top hitse value%identityAlignment
AT2G40320.1 TRICHOME BIREFRINGENCE-LIKE 336.8e-5275.83Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        +MLE+LRGKRMM+VGDSLNRG +VSM+CLLH LI +D KS++T  SLT+FTAKEYN TIEFYWAPFLLESNSD+A++HRISDR+VR+ SINKHGRHWK V
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DI++FNTYLWW+TG  M IL
Subjt:  DIMVFNTYLWWITGSNMKIL

AT3G11030.1 TRICHOME BIREFRINGENCE-LIKE 321.2e-5175.83Show/hide
Query:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV
        +MLESLRGK+MMFVGDSLNRG YVS++CLLHS I +++KSM+TF SLT+F+ K+YN TIEFYWAPFLLESNSDNA +HR+SDRIVR+ SINKHGRHW+  
Subjt:  MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRV

Query:  DIMVFNTYLWWITGSNMKIL
        DI+VFNTYLWW TG  MKIL
Subjt:  DIMVFNTYLWWITGSNMKIL

AT5G01620.1 TRICHOME BIREFRINGENCE-LIKE 351.1e-3662.73Show/hide
Query:  MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVD
        M E LRGKR+MFVGDSLNRGQ++SMVCLL S+I  D +SM     LTIF A++YN T+EF WAP L+ESNSD+ V HR+S+RI+R DS+ KH   W+  D
Subjt:  MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVD

Query:  IMVFNTYLWW
        I++FNTYLWW
Subjt:  IMVFNTYLWW

AT5G01620.2 TRICHOME BIREFRINGENCE-LIKE 351.1e-3662.73Show/hide
Query:  MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVD
        M E LRGKR+MFVGDSLNRGQ++SMVCLL S+I  D +SM     LTIF A++YN T+EF WAP L+ESNSD+ V HR+S+RI+R DS+ KH   W+  D
Subjt:  MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVD

Query:  IMVFNTYLWW
        I++FNTYLWW
Subjt:  IMVFNTYLWW

AT5G01620.3 TRICHOME BIREFRINGENCE-LIKE 351.1e-3662.73Show/hide
Query:  MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVD
        M E LRGKR+MFVGDSLNRGQ++SMVCLL S+I  D +SM     LTIF A++YN T+EF WAP L+ESNSD+ V HR+S+RI+R DS+ KH   W+  D
Subjt:  MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVD

Query:  IMVFNTYLWW
        I++FNTYLWW
Subjt:  IMVFNTYLWW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTAGAATCCTTAAGAGGAAAGAGGATGATGTTTGTTGGAGATTCATTAAATCGAGGGCAGTATGTTTCAATGGTTTGTCTTCTTCACTCTCTAATAGCC
GACGATGCCAAATCCATGGAGACCTTCGATTCACTCACTATCTTCACCGCCAAGGAGTACAATATGACAATCGAGTTCTATTGGGCGCCGTTTCTCCTAGAATCA
AATTCAGATAATGCAGTGATCCATCGAATTTCAGATCGAATAGTGAGAAGAGATTCGATAAATAAACATGGAAGGCATTGGAAAAGAGTTGATATTATGGTTTTC
AATACTTATCTTTGGTGGATTACTGGCTCAAACATGAAAATCCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTAGAATCCTTAAGAGGAAAGAGGATGATGTTTGTTGGAGATTCATTAAATCGAGGGCAGTATGTTTCAATGGTTTGTCTTCTTCACTCTCTAATAGCC
GACGATGCCAAATCCATGGAGACCTTCGATTCACTCACTATCTTCACCGCCAAGGAGTACAATATGACAATCGAGTTCTATTGGGCGCCGTTTCTCCTAGAATCA
AATTCAGATAATGCAGTGATCCATCGAATTTCAGATCGAATAGTGAGAAGAGATTCGATAAATAAACATGGAAGGCATTGGAAAAGAGTTGATATTATGGTTTTC
AATACTTATCTTTGGTGGATTACTGGCTCAAACATGAAAATCCTGTGA
Protein sequenceShow/hide protein sequence
MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEFYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVF
NTYLWWITGSNMKIL