; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G001310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G001310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S4
Genome locationCmo_Chr04:665127..667611
RNA-Seq ExpressionCmoCh04G001310
SyntenyCmoCh04G001310
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000876 - Ribosomal protein S4e
IPR002942 - RNA-binding S4 domain
IPR005824 - KOW
IPR013843 - Ribosomal protein S4e, N-terminal
IPR013845 - Ribosomal protein S4e, central region
IPR014722 - Ribosomal protein L2, domain 2
IPR018199 - Ribosomal protein S4e, N-terminal, conserved site
IPR032277 - 40S ribosomal protein S4, C-terminal domain
IPR036986 - RNA-binding S4 domain superfamily
IPR038237 - Ribosomal protein S4e, central domain superfamily
IPR041982 - Ribosomal protein S4, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022932544.1 40S ribosomal protein S4-3-like [Cucurbita moschata]4.8e-14596.59Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQ + TA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

XP_022941875.1 40S ribosomal protein S4-3-like [Cucurbita moschata]2.7e-148100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

XP_022976936.1 40S ribosomal protein S4-3-like [Cucurbita maxima]2.2e-14596.97Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQ A TA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

XP_022996364.1 40S ribosomal protein S4-3-like [Cucurbita maxima]8.0e-14899.62Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

XP_023543131.1 40S ribosomal protein S4-3-like [Cucurbita pepo subsp. pepo]6.7e-14798.86Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLA+ TAATA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

TrEMBL top hitse value%identityAlignment
A0A6J1EXA2 40S ribosomal protein S42.3e-14596.59Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQ + TA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

A0A6J1FV15 40S ribosomal protein S41.3e-148100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

A0A6J1II98 40S ribosomal protein S41.1e-14596.97Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQ A TA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

A0A6J1JJJ9 40S ribosomal protein S48.9e-14596.21Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEE+K+KLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDL++NKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPW+SLPKGKGIKLSIIEEARKRLASQ A TA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

A0A6J1K8I3 40S ribosomal protein S43.9e-14899.62Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

SwissProt top hitse value%identityAlignment
P46299 40S ribosomal protein S42.2e-14093.51Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV+VDGKVRTDKTYPAGFMDVVSIPKTNE+FR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRF LH+I  +E+KFKLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA
        HKGSFETIHVQDA GHEFATRL NVFTIGKGTKPWVSLPK KGIKLSIIEEARKRLA+Q AA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA

P46300 40S ribosomal protein S48.9e-14291.67Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREVI+ILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEESKFKLCKVRSVQFG+KGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA
        HKGSFET+H+QD+ GHEFATRL NVFT+GKGTKPWVSLPKGKGIKL+IIE+ARKRLA+Q+A  A
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA

P49204 40S ribosomal protein S4-28.9e-14292.37Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSI+DEE+KFKLCKVRS+QFG+KGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA
        HKGSFETIH+QD+TGHEFATRL NV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLASQ AA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA

Q8VYK6 40S ribosomal protein S4-36.8e-14292.37Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSI+DEE+KFKLCKVRS+QFG+KGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA
        HKGSFETIH+QD+TGHEFATRL NV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLASQ AA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA

Q93VH9 40S ribosomal protein S4-19.8e-14191.57Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSI+DEE+KFKLCKVRS+QFG+KGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTA
        HKGSFETIH+QD+TGHEFATRL NV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRL++Q A
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTA

Arabidopsis top hitse value%identityAlignment
AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein7.0e-14291.57Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSI+DEE+KFKLCKVRS+QFG+KGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTA
        HKGSFETIH+QD+TGHEFATRL NV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRL++Q A
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTA

AT2G17360.2 Ribosomal protein S4 (RPS4A) family protein2.0e-9691.16Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
        LLYDTKGRFRLHSI+DEE+KFKLCKVRS+QFG+KGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVG  V
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV

AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein6.3e-14392.37Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSI+DEE+KFKLCKVRS+QFG+KGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA
        HKGSFETIH+QD+TGHEFATRL NV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLASQ AA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA

AT5G07090.2 Ribosomal protein S4 (RPS4A) family protein2.5e-13191.8Show/hide
Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE

Query:  SKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEF
        +KFKLCKVRS+QFG+KGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIH+QD+TGHEF
Subjt:  SKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEF

Query:  ATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA
        ATRL NV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLASQ AA
Subjt:  ATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA

AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein4.8e-14392.37Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSI+DEE+KFKLCKVRS+QFG+KGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA
        HKGSFETIH+QD+TGHEFATRL NV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLASQ AA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAGGGTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCACATAA
ATCAAGGGAATGTCTCCCATTGATCCTTATCTTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTCATTGCAATATTGATGCAACGACATGTATTGGTCGATG
GGAAGGTTAGGACAGATAAGACCTATCCTGCTGGATTCATGGATGTTGTGTCGATCCCCAAAACAAATGAGAATTTCCGGCTCCTCTATGACACGAAAGGCCGATTCCGT
TTGCACTCAATCAGGGATGAGGAGTCTAAGTTTAAGCTCTGCAAAGTTCGCTCAGTGCAATTTGGGCGGAAGGGAATCCCTTACCTGAACACTTACGATGGACGTACAAT
CCGTTATCCCGACCCCTTGATCAAGGCAAACGACACCATCAAGCTGGACCTCGACTCAAACAAGATCGCTGATTTCATCAAGTTTGATGTCGGAAATGTTGTGATGGTGA
CCGGTGGAAGAAATCGTGGACGAGTCGGAGTAATTAAAAACAGGGAGAAGCACAAGGGAAGCTTTGAGACTATTCACGTTCAGGATGCAACTGGGCACGAATTTGCCACT
AGGTTGTGCAATGTCTTCACCATCGGGAAGGGGACGAAGCCATGGGTATCCCTTCCCAAGGGCAAGGGTATCAAACTATCCATCATTGAAGAGGCCAGGAAGAGGCTTGC
CAGCCAAACCGCAGCCACGGCTTAA
mRNA sequenceShow/hide mRNA sequence
CTACTCTGTTGGCTTCAAGCTTTCATGTAACATAGTACCGCCATTGGTCCAACTCCTTTCTTCGCGTCTGCAGAAGCTTTAGCTCACTCCCCGCAGCCGCCAGCGGCAAT
CTCACTTCCGTCGAACTTCGTTTTGGAAATATGGCAAGAGGGTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATT
TGCCCCCAAACCTTCATCTGGACCACATAAATCAAGGGAATGTCTCCCATTGATCCTTATCTTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTCATTGCAA
TATTGATGCAACGACATGTATTGGTCGATGGGAAGGTTAGGACAGATAAGACCTATCCTGCTGGATTCATGGATGTTGTGTCGATCCCCAAAACAAATGAGAATTTCCGG
CTCCTCTATGACACGAAAGGCCGATTCCGTTTGCACTCAATCAGGGATGAGGAGTCTAAGTTTAAGCTCTGCAAAGTTCGCTCAGTGCAATTTGGGCGGAAGGGAATCCC
TTACCTGAACACTTACGATGGACGTACAATCCGTTATCCCGACCCCTTGATCAAGGCAAACGACACCATCAAGCTGGACCTCGACTCAAACAAGATCGCTGATTTCATCA
AGTTTGATGTCGGAAATGTTGTGATGGTGACCGGTGGAAGAAATCGTGGACGAGTCGGAGTAATTAAAAACAGGGAGAAGCACAAGGGAAGCTTTGAGACTATTCACGTT
CAGGATGCAACTGGGCACGAATTTGCCACTAGGTTGTGCAATGTCTTCACCATCGGGAAGGGGACGAAGCCATGGGTATCCCTTCCCAAGGGCAAGGGTATCAAACTATC
CATCATTGAAGAGGCCAGGAAGAGGCTTGCCAGCCAAACCGCAGCCACGGCTTAAGAGTTTGAGTACTGTAGTAGTAGTCATGATTTGAAGACAGTTTTTGTCAAATTTT
TGCACTCTTTTTAATTATTATTACGAGTAAAATAGATCTTAAGACTATTTAATTCTACTAGAAATGTGATGAACACACTGCCTTCTATGATTTTGTTGTTGGAAAACACC
GTTATAATATAGACTGAAATTTTTTTTTTTC
Protein sequenceShow/hide protein sequence
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFR
LHSIRDEESKFKLCKVRSVQFGRKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFAT
RLCNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAATA