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CmoCh04G001800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G001800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionthioredoxin H1-like
Genome locationCmo_Chr04:918125..920787
RNA-Seq ExpressionCmoCh04G001800
SyntenyCmoCh04G001800
Gene Ontology termsNA
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600023.1 Thioredoxin H4, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5498.17Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKF GA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        KKDLLLNTV
Subjt:  KKDLLLNTV

XP_022942758.1 thioredoxin H1-like [Cucurbita moschata]9.4e-56100Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        KKDLLLNTV
Subjt:  KKDLLLNTV

XP_022996723.1 thioredoxin H-type-like [Cucurbita maxima]2.0e-5395.41Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAP+LD+LAKKSCNNVTFLKVDVD+LMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        KKD+LLN V
Subjt:  KKDLLLNTV

XP_023549191.1 thioredoxin H4-like [Cucurbita pepo subsp. pepo]3.0e-5497.25Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTV SWK+QFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        KKD+LLNTV
Subjt:  KKDLLLNTV

XP_038893273.1 thioredoxin H1-like [Benincasa hispida]1.1e-4380.34Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNN-VTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVG
        MADMGKVVSC TVGSWKQQ LKAKQ+NKL+VVNFTATWC PCR MAP+L+DLA K  NN V FLKVDVDELMSVANELGVGALPSFQFFKNG+LVDKFVG
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNN-VTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVG

Query:  AKKDLLLNTVEFLYVSS
        A+KD+L +TV    V S
Subjt:  AKKDLLLNTVEFLYVSS

TrEMBL top hitse value%identityAlignment
A0A1S3CMM6 thioredoxin H1-like3.4e-4381.65Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        M DMGKVVSC TVGSWKQQ LKAKQ+NKL+VVNFTATWC PCR MAP+L DLA K  NNV  LKVDVDELMSVANE GVGALPSFQFFKNG+LVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        +KD+L  TV
Subjt:  KKDLLLNTV

A0A5A7U8S0 Thioredoxin H1-like3.4e-4381.65Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        M DMGKVVSC TVGSWKQQ LKAKQ+NKL+VVNFTATWC PCR MAP+L DLA K  NNV  LKVDVDELMSVANE GVGALPSFQFFKNG+LVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        +KD+L  TV
Subjt:  KKDLLLNTV

A0A5D3DCH1 Thioredoxin H1-like3.4e-4381.65Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        M DMGKVVSC TVGSWKQQ LKAKQ+NKL+VVNFTATWC PCR MAP+L DLA K  NNV  LKVDVDELMSVANE GVGALPSFQFFKNG+LVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        +KD+L  TV
Subjt:  KKDLLLNTV

A0A6J1FVM4 thioredoxin H1-like4.5e-56100Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        KKDLLLNTV
Subjt:  KKDLLLNTV

A0A6J1KBU8 thioredoxin H-type-like9.5e-5495.41Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAP+LD+LAKKSCNNVTFLKVDVD+LMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        KKD+LLN V
Subjt:  KKDLLLNTV

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H11.6e-2651.85Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        ++ G+V++C TV +W +Q  KA +   L+VV+FTA+WC PCR +AP   DLAKK   NV FLKVD DEL SVA++  + A+P+F F K G+++DK VGAK
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTV
        KD L +T+
Subjt:  KDLLLNTV

Q39239 Thioredoxin H41.5e-2754.9Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        A+ G+V+ C T   W  Q  KAK+ NKL+V++FTA+WC PCR +AP+ +DLAKK  ++  F KVDVDEL SVA E GV A+P+F F K G++VDK VGA 
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KD
        K+
Subjt:  KD

Q39362 Thioredoxin H-type 23.6e-2650.93Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        A+ G+V+ C  +  W  Q   AKQ NKL+V++FTA+WC PCR +AP+  DLAKK  ++  F KVDVDEL +VA E GV A+P+F   K+G +VDK VGA+
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTV
        K+ L  T+
Subjt:  KDLLLNTV

Q43636 Thioredoxin H-type9.5e-2753.7Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        A+ G+V+ C TV +W +Q  K      L+VV+FTA+WC PCR +AP L +LAKK   NVTFLKVDVDEL +VA+E  V ++P+F F K G+++DK VGAK
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTV
        KD L  T+
Subjt:  KDLLLNTV

Q96419 Thioredoxin H-type8.9e-2549.54Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MA+  +V++C TV  W ++F KAK   KL+V++FTA+WC PCR + P + +LAKK   +V F KVDVD+L  VA E  V A+PSF   K GQ V++ VGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTV
        +KD LL+ +
Subjt:  KKDLLLNTV

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein1.0e-2854.9Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        A+ G+V+ C T   W  Q  KAK+ NKL+V++FTA+WC PCR +AP+ +DLAKK  ++  F KVDVDEL SVA E GV A+P+F F K G++VDK VGA 
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KD
        K+
Subjt:  KD

AT1G45145.1 thioredoxin H-type 51.6e-2447.57Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MA  G+V++C T+  W ++   A +  KL+V++FTA+WC PCR +AP+  ++AKK   NV F K+DVDEL +VA E  V A+P+F F K G ++D+ VGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKD
         KD
Subjt:  KKD

AT3G51030.1 thioredoxin H-type 11.2e-2751.85Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        ++ G+V++C TV +W +Q  KA +   L+VV+FTA+WC PCR +AP   DLAKK   NV FLKVD DEL SVA++  + A+P+F F K G+++DK VGAK
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTV
        KD L +T+
Subjt:  KDLLLNTV

AT5G39950.1 thioredoxin 28.8e-2041.44Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        ++  +V+   +   W+  F + K+ NKLLVV+F+A+WC PCR + P +  +A K  N+V F+K+DVDEL  VA E  V A+P+F   K G+ +++ +GAK
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTVEFL
        KD L   V  L
Subjt:  KDLLLNTVEFL

AT5G42980.1 thioredoxin 32.7e-2447.27Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MA  G+V++C TV  W ++   A +  KL+V++FTATWC PCR +AP+  DLAKK   +V F KVDVDEL +VA E  V A+P+F F K G++ +  VGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVE
         K+ ++  +E
Subjt:  KKDLLLNTVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACATGGGGAAAGTGGTTTCTTGCCCTACAGTTGGCTCATGGAAGCAACAGTTCCTCAAAGCCAAACAACACAACAAACTGCTGGTTGTCAATTTCACTGCAAC
ATGGTGCCGCCCGTGTCGTGCCATGGCTCCACTGCTCGACGATTTAGCAAAGAAATCGTGCAATAACGTAACGTTCTTGAAAGTCGACGTTGATGAACTCATGAGTGTGG
CCAATGAGTTAGGAGTGGGCGCCCTTCCATCGTTTCAATTCTTCAAGAACGGACAGTTGGTGGACAAGTTCGTGGGCGCAAAGAAAGATCTATTGCTCAACACTGTAGAG
TTTTTGTATGTCTCCAGCTTCGGTGCGCTTTGTTTAATTCCTGTAGTTGTTTCGCATATGTTCTCAGCCGTAGAGCCCTTCTTTATCCTGAATGAATCAACCCCTTCGGC
CACAGCTCAATTTCTTTATTATACTTAA
mRNA sequenceShow/hide mRNA sequence
GAGCTGCGTGGTCCTGAAATTCTCCAGTCCCACATCGCTATTTCTTAATATCCCCTCCTCTTCGACTCCTATAAATTCACCCGCTCAGCTCTCAACTCTCCATTCAGTTT
AATACACAGTTCCCATTTCTTCTTTCTTTTCCTTTTCCTTTTGTTCTGTAAGCGACTTCAATGGCGGACATGGGGAAAGTGGTTTCTTGCCCTACAGTTGGCTCATGGAA
GCAACAGTTCCTCAAAGCCAAACAACACAACAAACTGCTGGTTGTCAATTTCACTGCAACATGGTGCCGCCCGTGTCGTGCCATGGCTCCACTGCTCGACGATTTAGCAA
AGAAATCGTGCAATAACGTAACGTTCTTGAAAGTCGACGTTGATGAACTCATGAGTGTGGCCAATGAGTTAGGAGTGGGCGCCCTTCCATCGTTTCAATTCTTCAAGAAC
GGACAGTTGGTGGACAAGTTCGTGGGCGCAAAGAAAGATCTATTGCTCAACACTGTAGAGTTTTTGTATGTCTCCAGCTTCGGTGCGCTTTGTTTAATTCCTGTAGTTGT
TTCGCATATGTTCTCAGCCGTAGAGCCCTTCTTTATCCTGAATGAATCAACCCCTTCGGCCACAGCTCAATTTCTTTATTATACTTAA
Protein sequenceShow/hide protein sequence
MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDLLLNTVE
FLYVSSFGALCLIPVVVSHMFSAVEPFFILNESTPSATAQFLYYT