; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G001810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G001810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCmo_Chr04:920825..922823
RNA-Seq ExpressionCmoCh04G001810
SyntenyCmoCh04G001810
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600024.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-15099.26Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLT STTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQ ENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

XP_022139301.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]7.4e-13388.19Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  T S T ERRIV KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG 
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN KMV+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

XP_022942519.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata]4.2e-152100Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

XP_022996325.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita maxima]1.1e-14998.52Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLT STTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMI+LYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGK VYKRYGCKWKYIHFK ERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

XP_023541595.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo]4.6e-15199.26Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLT STTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGK+VYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

TrEMBL top hitse value%identityAlignment
A0A1S3CP50 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.3e-13288.19Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML   GSSTGFDALVPK  CIY +NK AFR ASV CVH QAAQ  T  TT ERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKR+FSRMISLY+HHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGV+PDEDTVRR+  AF+KLGQEEN KMVYKRY C+WKYIHFKGERVRVR+DGWDEDD+
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

A0A5A7UD21 Pentatricopeptide repeat-containing protein2.3e-13288.19Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML   GSSTGFDALVPK  CIY +NK AFR ASV CVH QAAQ  T  TT ERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKR+FSRMISLY+HHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGV+PDEDTVRR+  AF+KLGQEEN KMVYKRY C+WKYIHFKGERVRVR+DGWDEDD+
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

A0A6J1CC95 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X13.6e-13388.19Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  T S T ERRIV KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG 
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN KMV+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

A0A6J1FWG3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.0e-152100Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

A0A6J1K6G2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic5.5e-15098.52Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLT STTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMI+LYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGK VYKRYGCKWKYIHFK ERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.8e-9077.67Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L QEEN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

Q8LG95 Pentatricopeptide repeat-containing protein At4g211902.3e-4445.18Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRY-GCKWKYIHFKGERVRVR
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGV+P+   V  V   F KL  ++  + + K+Y   +W++ + KG RV+V+
Subjt:  AESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRY-GCKWKYIHFKGERVRVR

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein2.0e-9177.67Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L QEEN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein2.0e-9177.67Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L QEEN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein2.0e-9177.67Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L QEEN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein2.0e-9177.67Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L QEEN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-4545.18Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRY-GCKWKYIHFKGERVRVR
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGV+P+   V  V   F KL  ++  + + K+Y   +W++ + KG RV+V+
Subjt:  AESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRY-GCKWKYIHFKGERVRVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCTTACCGTGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGAAAGTTTGCATTTACAATTACAACAAATTGGCATTTAGAGCTGCCAGTGTCAAGTGTGT
CCACAAGCAAGCTGCGCAGTCGCTTACAGGTTCCACCACAGCTGAGAGACGTATTGTTAAGAAGAAGGTTGGGAAGGAGGCCCACCATTTATGGAAGAAAAGAGATTCTG
CTGGCTCTGGCCAAAAAGCTCTGAATCTTGTTAGAATTGTCTCCCAATGCCCCAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACGGAG
TTTCCATTGATTGCAGCTTCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGCTAAGCAAGGGTCAAGGTGCCAC
AATGGGTACCTATGACACTCTTCTTCTGGCATTTGATATGGACAAGAGGGTGGATGAAGCCGAATCTTTATGGAACATGATTTTGCATGCACATACTCGTTCCATCTCTA
AGCGACTGTTTTCTAGGATGATCTCTTTATATGACCATCATGACTTGCAAGATAAGATTATTGAGATATTTGCAGACATGGAGGAGTTGGGAGTAAGGCCAGATGAAGAC
ACAGTTAGAAGAGTAGCCCACGCCTTTCGAAAACTAGGTCAAGAAGAAAACGGGAAAATGGTGTATAAAAGATATGGCTGCAAATGGAAATACATACATTTCAAGGGTGA
GAGGGTTAGAGTGAGAAGAGATGGATGGGATGAAGATGATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGCTTACCGTGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGAAAGTTTGCATTTACAATTACAACAAATTGGCATTTAGAGCTGCCAGTGTCAAGTGTGT
CCACAAGCAAGCTGCGCAGTCGCTTACAGGTTCCACCACAGCTGAGAGACGTATTGTTAAGAAGAAGGTTGGGAAGGAGGCCCACCATTTATGGAAGAAAAGAGATTCTG
CTGGCTCTGGCCAAAAAGCTCTGAATCTTGTTAGAATTGTCTCCCAATGCCCCAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACGGAG
TTTCCATTGATTGCAGCTTCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGCTAAGCAAGGGTCAAGGTGCCAC
AATGGGTACCTATGACACTCTTCTTCTGGCATTTGATATGGACAAGAGGGTGGATGAAGCCGAATCTTTATGGAACATGATTTTGCATGCACATACTCGTTCCATCTCTA
AGCGACTGTTTTCTAGGATGATCTCTTTATATGACCATCATGACTTGCAAGATAAGATTATTGAGATATTTGCAGACATGGAGGAGTTGGGAGTAAGGCCAGATGAAGAC
ACAGTTAGAAGAGTAGCCCACGCCTTTCGAAAACTAGGTCAAGAAGAAAACGGGAAAATGGTGTATAAAAGATATGGCTGCAAATGGAAATACATACATTTCAAGGGTGA
GAGGGTTAGAGTGAGAAGAGATGGATGGGATGAAGATGATAAATGA
Protein sequenceShow/hide protein sequence
MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE
FPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDED
TVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK