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CmoCh04G001900 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G001900
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein DA1-related 2-like isoform X3
Genome locationCmo_Chr04:953762..954177
RNA-Seq ExpressionCmoCh04G001900
SyntenyCmoCh04G001900
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600029.1 Protein DA1-related 2, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2696.67Show/hide
Query:  MDLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
        MDLSHPCI+EKKSGWMKW SKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
Subjt:  MDLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST

XP_022995423.1 protein DA1-related 2-like isoform X1 [Cucurbita maxima]6.4e-2196.15Show/hide
Query:  SEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
        ++KKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
Subjt:  SEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST

XP_022995431.1 protein DA1-related 2-like isoform X2 [Cucurbita maxima]1.2e-2267.82Show/hide
Query:  MDLSHPCIS---------------------------EKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
        MDLSHPCIS                           +KKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
Subjt:  MDLSHPCIS---------------------------EKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST

XP_022995438.1 protein DA1-related 2-like isoform X3 [Cucurbita maxima]1.6e-27100Show/hide
Query:  MDLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
        MDLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
Subjt:  MDLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST

XP_023546685.1 protein DA1-related 2-like isoform X1 [Cucurbita pepo subsp. pepo]5.4e-2078.46Show/hide
Query:  DLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSG------SGGSPPQQLLGDQENIVWRAPARST
        +LSHPCISEKKSGWMKWLS+I R GPNRGGGGSG      SGG  PQQL+GDQENI WRAPARST
Subjt:  DLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSG------SGGSPPQQLLGDQENIVWRAPARST

TrEMBL top hitse value%identityAlignment
A0A6J1FPK0 protein DA1-related 2-like1.1e-1876.92Show/hide
Query:  DLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSG------SGGSPPQQLLGDQENIVWRAPARST
        +LSHPCISEKKSGWMKWLS+I R GPNRGGGGSG      SGG  PQQL+GDQENI  RAPARST
Subjt:  DLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSG------SGGSPPQQLLGDQENIVWRAPARST

A0A6J1K1W6 protein DA1-related 2-like isoform X25.7e-2367.82Show/hide
Query:  MDLSHPCIS---------------------------EKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
        MDLSHPCIS                           +KKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
Subjt:  MDLSHPCIS---------------------------EKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST

A0A6J1K439 protein DA1-related 2-like isoform X18.5e-1976.92Show/hide
Query:  DLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSP------PQQLLGDQENIVWRAPARST
        +LSHPCISEKKSGWMKWLS+I R GPNRGGGGSGSG S       PQQL+GDQENI  RAPARST
Subjt:  DLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSP------PQQLLGDQENIVWRAPARST

A0A6J1K7W2 protein DA1-related 2-like isoform X13.1e-2196.15Show/hide
Query:  SEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
        ++KKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
Subjt:  SEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST

A0A6J1K7X9 protein DA1-related 2-like isoform X37.7e-28100Show/hide
Query:  MDLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
        MDLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST
Subjt:  MDLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTATCTCATCCTTGCATTTCCGAGAAAAAATCTGGGTGGATGAAATGGTTGAGCAAAATTGTCCGGCCAGGACCCAACAGGGGAGGCGGCGGCAGTGGCAGTGG
CGGCAGCCCTCCACAGCAGCTTCTTGGTGATCAGGAGAACATAGTCTGGCGAGCTCCGGCTAGATCAACGGTCAACTTCTGTTTTTCCTTCCCCCACCTTCTATTGAATT
TGATCTTCTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCTATCTCATCCTTGCATTTCCGAGAAAAAATCTGGGTGGATGAAATGGTTGAGCAAAATTGTCCGGCCAGGACCCAACAGGGGAGGCGGCGGCAGTGGCAGTGG
CGGCAGCCCTCCACAGCAGCTTCTTGGTGATCAGGAGAACATAGTCTGGCGAGCTCCGGCTAGATCAACGGTCAACTTCTGTTTTTCCTTCCCCCACCTTCTATTGAATT
TGATCTTCTTTGATTAG
Protein sequenceShow/hide protein sequence
MDLSHPCISEKKSGWMKWLSKIVRPGPNRGGGGSGSGGSPPQQLLGDQENIVWRAPARSTVNFCFSFPHLLLNLIFFD