CuGenDBv2

Gene ID	CmoCh04G001950
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	ultraviolet-B receptor UVR8-like isoform X1
Genome location	Cmo_Chr04:976087..976800
RNA-Seq Expression	CmoCh04G001950
Synteny	CmoCh04G001950
Gene Ontology terms	NA
InterPro domains	IPR000408 - Regulator of chromosome condensation, RCC1 IPR009091 - Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7030701.1 Ultraviolet-B receptor UVR8 [Cucurbita argyrosperma subsp. argyrosperma]

5.7e-51

69.18

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Query:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVTGFVICWSAANIRLGTVWT
        +SDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT      + A +  G    
Subjt:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVTGFVICWSAANIRLGTVWT

Query:  VLSSRRLHSIPSLFIVRISFLLHDHAYFISGKTICGHLSCAGCSSPSLFHREVRYYNLV
                                  + + G+TICGHLSCAGCSSPS FHREVRYYNLV
Subjt:  VLSSRRLHSIPSLFIVRISFLLHDHAYFISGKTICGHLSCAGCSSPSLFHREVRYYNLV

XP_022942724.1 ultraviolet-B receptor UVR8-like isoform X1 [Cucurbita moschata]

4.6e-40

94.32

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Query:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        H     VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
Subjt:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

XP_022995533.1 ultraviolet-B receptor UVR8-like isoform X1 [Cucurbita maxima]

1.3e-39

93.18

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Query:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        H     VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDR MALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
Subjt:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

XP_031741983.1 ultraviolet-B receptor UVR8 isoform X1 [Cucumis sativus]

3.5e-40

93.26

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Query:  MHPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        M PNVF+VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES SFGKDR+ ALARGSASLEG GSRIPGSYVKGIACGGRHSAAVT
Subjt:  MHPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

XP_031741984.1 ultraviolet-B receptor UVR8 isoform X2 [Cucumis sativus]

3.5e-40

93.26

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Query:  MHPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        M PNVF+VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES SFGKDR+ ALARGSASLEG GSRIPGSYVKGIACGGRHSAAVT
Subjt:  MHPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U521 Ultraviolet-B receptor UVR8 isoform X1

5.1e-37

88.64

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Query:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        H     VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES SFGKDR+ ALARGSAS EG GSRIPGSYVKGIACGGRHSAAVT
Subjt:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

A0A6J1FS62 ultraviolet-B receptor UVR8-like isoform X1

2.2e-40

94.32

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Query:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        H     VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
Subjt:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

A0A6J1FWU0 ultraviolet-B receptor UVR8-like isoform X2

2.4e-39

98.78

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Query:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        +SDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
Subjt:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

A0A6J1JZ75 ultraviolet-B receptor UVR8-like isoform X2

7.1e-39

97.56

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Query:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        +SDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDR MALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
Subjt:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

A0A6J1K879 ultraviolet-B receptor UVR8-like isoform X1

6.4e-40

93.18

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Query:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        H     VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDR MALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
Subjt:  HPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G53830.1 Regulator of chromosome condensation (RCC1) family protein

1.4e-26

63.86

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Query:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALAR-GSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        +SD+GQ+WGWGYGGEGQLGLGSRI+MVSSPH IPC+ES   GK+R+  L + G+ +     SR PG Y+K I+CGGRHSAA+T
Subjt:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALAR-GSASLEGHGSRIPGSYVKGIACGGRHSAAVT

AT3G55580.1 Regulator of chromosome condensation (RCC1) family protein

2.0e-25

65.85

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Query:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT
        +SD+GQVWGWGYGGEGQLGLGSR+R+VSSPHPIPCIE  S+GK  +  +   S    G   R+ GSYVK IACGGRHSA +T
Subjt:  VSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVT

Sequences

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CDS sequence

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ATGCACCCTAATGTCTTCAAAGTTTCAGATATGGGACAGGTCTGGGGTTGGGGCTATGGTGGAGAAGGACAGCTAGGTTTGGGTTCCCGCATACGTATGGTTTCCTCTCC
ACATCCTATACCTTGCATCGAGTCACCTTCTTTTGGCAAAGATAGAGCCATGGCTCTTGCTCGAGGAAGTGCAAGTTTAGAGGGTCACGGTAGTAGAATTCCAGGAAGCT
ATGTGAAGGGAATTGCTTGTGGAGGACGTCATAGTGCAGCAGTTACAGGTTTTGTGATATGCTGGAGCGCTGCTAACATTCGGTTGGGGACTGTATGGACAGTACTTTCC
TCCCGCCGTCTTCATTCCATTCCATCACTTTTCATTGTGAGAATTTCCTTTTTGTTACATGATCATGCGTACTTCATTAGCGGTAAGACAATATGTGGGCATCTTTCTTG
TGCTGGTTGTTCATCGCCTAGCCTTTTCCACCGTGAAGTACGCTATTACAATTTGGTGTGCTAG

mRNA sequence

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Protein sequence

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MHPNVFKVSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESPSFGKDRAMALARGSASLEGHGSRIPGSYVKGIACGGRHSAAVTGFVICWSAANIRLGTVWTVLS
SRRLHSIPSLFIVRISFLLHDHAYFISGKTICGHLSCAGCSSPSLFHREVRYYNLVC

CmoCh04G001950 (gene) of Cucurbita moschata (Rifu) v1 genome