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CmoCh04G001990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G001990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionC2H2-type domain-containing protein
Genome locationCmo_Chr04:982910..988785
RNA-Seq ExpressionCmoCh04G001990
SyntenyCmoCh04G001990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600035.1 Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia]8.8e-24100Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
        MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
Subjt:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
XP_004151402.2 zinc finger protein 11 [Cucumis sativus]1.8e-0866.67Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
        MA+TH LWRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFR
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
XP_008461701.1 PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]1.8e-0866.67Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
        MAETH +WRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFR
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
XP_022988302.1 zinc finger protein 10-like [Cucurbita maxima]8.8e-24100Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
        MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
Subjt:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
XP_023542190.1 zinc finger protein 10-like [Cucurbita pepo subsp. pepo]8.8e-24100Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
        MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
Subjt:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
TrEMBL top hitse value%identityAlignment
A0A0A0KLQ3 C2H2-type domain-containing protein8.6e-0966.67Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
        MA+TH LWRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFR
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
A0A1S3CGM6 transcriptional regulator SUPERMAN-like8.6e-0966.67Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
        MAETH +WRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFR
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
A0A2P5CX58 Zinc finger transcription factor2.5e-0841.11Show/hide
Query:  MAETHHLWRQILNY-SNTFKPSPSWEEKAFAEDTAAA------VWPPRSYSCNFCMRQFREEKWKAKAKGFGMRFESSFDFCSHMMPMRH
        + +TH   + IL   S++   SPSWEEKAFAE+ AAA      +WPPRSYSC+FCMR+F+  +          R  +    C ++MP  H
Subjt:  MAETHHLWRQILNY-SNTFKPSPSWEEKAFAEDTAAA------VWPPRSYSCNFCMRQFREEKWKAKAKGFGMRFESSFDFCSHMMPMRH
A0A5A7UA35 Transcriptional regulator SUPERMAN-like8.6e-0966.67Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
        MAETH +WRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFR
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFR
A0A6J1JCP1 zinc finger protein 10-like4.3e-24100Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
        MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
Subjt:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFR
SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 103.0e-0668.75Show/hide
Query:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFR
        SWEE AFAED AA ++WPPRSY+C+FC R+F+
Subjt:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFR
Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 102.1e-0768.75Show/hide
Query:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFR
        SWEE AFAED AA ++WPPRSY+C+FC R+F+
Subjt:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFR
AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein1.0e-0660Show/hide
Query:  SWEEKAFAEDT----AAAVWPPRSYSCNFCMRQFR
        SWE KAF +DT    +   WPPRSY+CNFC R+FR
Subjt:  SWEEKAFAEDT----AAAVWPPRSYSCNFCMRQFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGT
CTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGTGAGGAGAAATGGAAGGCGAAGGCGAAGGGTTTTGGGATGAGATTTGAGAGCTCTTTTGATT
TCTGTTCACATATGATGCCTATGCGCCATATTTATGGAGCTGTTTTGCTTGGAAGCTCTGCAAGAGGCTTCGGCGTATTCACCCTTTTCATCTTCGATTCTTGCCTTTTA
GCTTCGGAATTCGACTTCGATTTAGAGCAAAAAAGAAAGACCCGTGTAGAAGTACTCGAGGAAGACACTAAATTATGCAGAGAACTTGAGATTGTTGCTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGT
CTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGTGAGGAGAAATGGAAGGCGAAGGCGAAGGGTTTTGGGATGAGATTTGAGAGCTCTTTTGATT
TCTGTTCACATATGATGCCTATGCGCCATATTTATGGAGCTGTTTTGCTTGGAAGCTCTGCAAGAGGCTTCGGCGTATTCACCCTTTTCATCTTCGATTCTTGCCTTTTA
GCTTCGGAATTCGACTTCGATTTAGAGCAAAAAAGAAAGACCCGTGTAGAAGTACTCGAGGAAGACACTAAATTATGCAGAGAACTTGAGATTGTTGCTTGTTGA
Protein sequenceShow/hide protein sequence
MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFREEKWKAKAKGFGMRFESSFDFCSHMMPMRHIYGAVLLGSSARGFGVFTLFIFDSCLL
ASEFDFDLEQKRKTRVEVLEEDTKLCRELEIVAC