; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G002020 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G002020
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAT-hook motif nuclear-localized protein
Genome locationCmo_Chr04:1004403..1005206
RNA-Seq ExpressionCmoCh04G002020
SyntenyCmoCh04G002020
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003680 - AT DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005175 - PPC domain
IPR014476 - AT-hook motif nuclear-localized protein 15-29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022941700.1 AT-hook motif nuclear-localized protein 15-like [Cucurbita moschata]1.1e-141100Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

XP_022956523.1 AT-hook motif nuclear-localized protein 15-like [Cucurbita moschata]1.1e-12891.76Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MA+RWWAENIPTTTDSST+NPYSTPLKQS+EA DEENNSG +ER EPGT S+TRRPRGRPPGSKNK KPPVVVTKESPDALRSHVLEIGSGSDIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVLSGNGVVANVTLRHPAAP  VITLQGRFDILSLSGAFLP+PAPPGATGLTVYLAGGQGQVVGGIVVGAL+ATGPVIVIAATFTNAT+E+
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLE+EEAAAGDKSG SQNNSTSQSMGD  QQQPSMG YNM SNLVPNGQVSSHDVFWSPPRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

XP_022993355.1 AT-hook motif nuclear-localized protein 15-like [Cucurbita maxima]3.8e-12992.13Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MA+RWWAENIPTTTDSST+NPYSTPLKQS+EA DEENNSGS+ER EPGT S+TRRPRGRPPGSKNK KPPVVVTKESPDALRSHVLEIGSGSDIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVLSGNGVVANVTLRHPAAP  VITLQGRFDILSLSGAFLP+PAPPGATGLTVYLAGGQGQVVGGIVVGAL+ATGPVIVIAATFTNAT+E+
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLE+EEAAAGDKSG SQNNSTSQSMGD  QQQPSMG YNM SNLVPNGQVSSHDVFWSPPRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

XP_022996345.1 AT-hook motif nuclear-localized protein 15-like [Cucurbita maxima]1.1e-13998.5Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYER EPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSG DIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVL GNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYE+
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

XP_023528445.1 AT-hook motif nuclear-localized protein 15-like [Cucurbita pepo subsp. pepo]9.5e-14199.25Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYER EPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYE+
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

TrEMBL top hitse value%identityAlignment
A0A1S3CF67 AT-hook motif nuclear-localized protein5.0e-12790.64Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MA+RWWAENIPTTTDSST+NPYSTPLKQSLEAADEENNSGS+ER EPGT S+TRRPRGRPPGSKNK KPPVVVTKESPDALRSHVLEIGSGSDIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVLSGNGVVANVTLRHP A G VITLQGRFDILSLSGAFLP+PAPPGATGLTVYLAGGQGQVVGGIVVGAL+ATGPVIVIAATFTNAT+E+
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLEDEE AAGDKSG SQNNSTSQSMG+QQQQ PSMG YNM  NLV NGQVSSHD+ WS PRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

A0A6J1FUG4 AT-hook motif nuclear-localized protein5.5e-142100Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

A0A6J1GX35 AT-hook motif nuclear-localized protein5.3e-12991.76Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MA+RWWAENIPTTTDSST+NPYSTPLKQS+EA DEENNSG +ER EPGT S+TRRPRGRPPGSKNK KPPVVVTKESPDALRSHVLEIGSGSDIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVLSGNGVVANVTLRHPAAP  VITLQGRFDILSLSGAFLP+PAPPGATGLTVYLAGGQGQVVGGIVVGAL+ATGPVIVIAATFTNAT+E+
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLE+EEAAAGDKSG SQNNSTSQSMGD  QQQPSMG YNM SNLVPNGQVSSHDVFWSPPRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

A0A6J1JYA9 AT-hook motif nuclear-localized protein1.8e-12992.13Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MA+RWWAENIPTTTDSST+NPYSTPLKQS+EA DEENNSGS+ER EPGT S+TRRPRGRPPGSKNK KPPVVVTKESPDALRSHVLEIGSGSDIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVLSGNGVVANVTLRHPAAP  VITLQGRFDILSLSGAFLP+PAPPGATGLTVYLAGGQGQVVGGIVVGAL+ATGPVIVIAATFTNAT+E+
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLE+EEAAAGDKSG SQNNSTSQSMGD  QQQPSMG YNM SNLVPNGQVSSHDVFWSPPRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

A0A6J1K6I2 AT-hook motif nuclear-localized protein5.1e-14098.5Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN
        MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYER EPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSG DIVESISN
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISN

Query:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ
        FAQRRQRGVSVL GNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYE+
Subjt:  FAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQ

Query:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
        LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF
Subjt:  LPLEDEEAAAGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF

SwissProt top hitse value%identityAlignment
O22130 AT-hook motif nuclear-localized protein 221.3e-5550Show/hide
Query:  ENNSGSYERVEPGTGS-----------TTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLR
        E++S   ++  PG+G             TRRPRGRP GSKNK KPP+++T++S +AL+SHV+E+ +G D++ES++ FA+RRQRG+ VLSGNG V NVT+R
Subjt:  ENNSGSYERVEPGTGS-----------TTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLR

Query:  HPAA-PG---NVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLED---EEAAAGDKSGNS
         PA+ PG   +V+ L GRF+ILSLSG+FLP PAPP A+GLT+YLAGGQGQVVGG VVG L+A+GPV+++AA+F NA YE+LPLE+   EE  AG  + N 
Subjt:  HPAA-PG---NVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLED---EEAAAGDKSGNS

Query:  QNNST------SQSMGDQQQQQ-----PSMGNYNMTSNLVPNGQVSSHDVFWSPPR
          N+T      +Q+   QQQQQ     P+     +  NL+ + Q+ + + +W  PR
Subjt:  QNNST------SQSMGDQQQQQ-----PSMGNYNMTSNLVPNGQVSSHDVFWSPPR

O49662 AT-hook motif nuclear-localized protein 242.6e-5653.56Show/hide
Query:  DEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPA---APG
        D    SG       G    TRRPRGRP GSKNK KPP+++T++S +ALR+HV+EIG G D+VES++ FA+RRQRGV V+SG G V NVT+R P    +PG
Subjt:  DEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPA---APG

Query:  NVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAAAGDKSGNSQNNSTSQSMGDQQ
        +V++L GRF+ILSLSG+FLP PAPP ATGL+VYLAGGQGQVVGG VVG L+  GPV+V+AA+F+NA YE+LPLE++E       G    +  S  M  QQ
Subjt:  NVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAAAGDKSGNSQNNSTSQSMGDQQ

Query:  ---QQQPSMGNYNMTSNLVPNGQV-SSHD-VFWSPPRAP
           QQQ   G+  +  NL+ + Q+   HD  +WS  R P
Subjt:  ---QQQPSMGNYNMTSNLVPNGQV-SSHD-VFWSPPRAP

Q8GWQ2 AT-hook motif nuclear-localized protein 207.3e-5954.81Show/hide
Query:  AADEENNSGSYERVEPGTGS---TTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPAA
        A ++  ++   E  +P  G+     RRPRGRPPGSKNK K P+ VT++SP+ALRSHVLEI  GSD+ ++I++F++RRQRGV VLSG G VANVTLR  AA
Subjt:  AADEENNSGSYERVEPGTGS---TTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPAA

Query:  PGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAAAGDKSGNSQNNSTSQSMGD
        PG V++LQGRF+ILSL+GAFLP P+PPG+TGLTVYLAG QGQVVGG VVG L+A G V+VIAATF+NATYE+LP+E+EE   G +  +   +S  +   +
Subjt:  PGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAAAGDKSGNSQNNSTSQSMGD

Query:  QQQQQPSMG-NYNMTSNLVPN--GQVSSHDVFWSPPRAP
                G  YNM  +L+PN  GQ+      W   R P
Subjt:  QQQQQPSMG-NYNMTSNLVPN--GQVSSHDVFWSPPRAP

Q9M2S3 AT-hook motif nuclear-localized protein 152.8e-6655.2Show/hide
Query:  NIPTTTDSS-------TTNPYSTPLKQSLEAADEENNSGSYERVEP--GTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESIS
        N PT T S        TTN   +P  Q+ ++ +E+N+      VEP  G+GST RRPRGRPPGSKNK K PVVVTKESP++L+SHVLEI +G+D+ ES++
Subjt:  NIPTTTDSS-------TTNPYSTPLKQSLEAADEENNSGSYERVEP--GTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESIS

Query:  NFAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLP-SPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATY
         FA+RR RGVSVLSG+G+V NVTLR PAA G V++L+G+F+ILS+ GAFLP S +P  A GLT+YLAG QGQVVGG V G LIA+GPVIVIAATF NATY
Subjt:  NFAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLP-SPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATY

Query:  EQLPLEDEEAAA-------GDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNG-QVSSHDVFWS--PPRAPPPF
        E+LP+E+E+          G K     +++ S + G++   QP M  YNM  N +PNG Q++ HDV+W   PPRAPP +
Subjt:  EQLPLEDEEAAA-------GDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNG-QVSSHDVFWS--PPRAPPPF

Q9SR17 AT-hook motif nuclear-localized protein 193.0e-6048.26Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQ-----SLEAA---------------------DEENNSG-SYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVV
        MA+ WW   +   +   TT P S+ LK+     S+  A                     D +N SG  +E  E    + TRRPRGRP GSKNK KPP+ V
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQ-----SLEAA---------------------DEENNSG-SYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVV

Query:  TKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHP------AAPGN--VITLQGRFDILSLSGAFLPSPAPPGATGLTVYLA
        T++SP+AL+SHV+EI SG+D++E+++ FA+RRQRG+ +LSGNG VANVTLR P      AAPG   V+ LQGRF+ILSL+G+FLP PAPPG+TGLT+YLA
Subjt:  TKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHP------AAPGN--VITLQGRFDILSLSGAFLPSPAPPGATGLTVYLA

Query:  GGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAA------------AGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPN-----
        GGQGQVVGG VVG L+A GPV++IAATF+NATYE+LPLE+EEAA             G   G     S+    GD  Q  P    YNM  NLV N     
Subjt:  GGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAA------------AGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPN-----

Query:  -GQVSSHDVF-WSPPRA
         GQ+S  + + W+  R+
Subjt:  -GQVSSHDVF-WSPPRA

Arabidopsis top hitse value%identityAlignment
AT2G45430.1 AT-hook motif nuclear-localized protein 229.1e-5750Show/hide
Query:  ENNSGSYERVEPGTGS-----------TTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLR
        E++S   ++  PG+G             TRRPRGRP GSKNK KPP+++T++S +AL+SHV+E+ +G D++ES++ FA+RRQRG+ VLSGNG V NVT+R
Subjt:  ENNSGSYERVEPGTGS-----------TTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLR

Query:  HPAA-PG---NVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLED---EEAAAGDKSGNS
         PA+ PG   +V+ L GRF+ILSLSG+FLP PAPP A+GLT+YLAGGQGQVVGG VVG L+A+GPV+++AA+F NA YE+LPLE+   EE  AG  + N 
Subjt:  HPAA-PG---NVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLED---EEAAAGDKSGNS

Query:  QNNST------SQSMGDQQQQQ-----PSMGNYNMTSNLVPNGQVSSHDVFWSPPR
          N+T      +Q+   QQQQQ     P+     +  NL+ + Q+ + + +W  PR
Subjt:  QNNST------SQSMGDQQQQQ-----PSMGNYNMTSNLVPNGQVSSHDVFWSPPR

AT3G04570.1 AT-hook motif nuclear-localized protein 192.1e-6148.26Show/hide
Query:  MASRWWAENIPTTTDSSTTNPYSTPLKQ-----SLEAA---------------------DEENNSG-SYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVV
        MA+ WW   +   +   TT P S+ LK+     S+  A                     D +N SG  +E  E    + TRRPRGRP GSKNK KPP+ V
Subjt:  MASRWWAENIPTTTDSSTTNPYSTPLKQ-----SLEAA---------------------DEENNSG-SYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVV

Query:  TKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHP------AAPGN--VITLQGRFDILSLSGAFLPSPAPPGATGLTVYLA
        T++SP+AL+SHV+EI SG+D++E+++ FA+RRQRG+ +LSGNG VANVTLR P      AAPG   V+ LQGRF+ILSL+G+FLP PAPPG+TGLT+YLA
Subjt:  TKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHP------AAPGN--VITLQGRFDILSLSGAFLPSPAPPGATGLTVYLA

Query:  GGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAA------------AGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPN-----
        GGQGQVVGG VVG L+A GPV++IAATF+NATYE+LPLE+EEAA             G   G     S+    GD  Q  P    YNM  NLV N     
Subjt:  GGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAA------------AGDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPN-----

Query:  -GQVSSHDVF-WSPPRA
         GQ+S  + + W+  R+
Subjt:  -GQVSSHDVF-WSPPRA

AT3G55560.1 AT-hook protein of GA feedback 22.0e-6755.2Show/hide
Query:  NIPTTTDSS-------TTNPYSTPLKQSLEAADEENNSGSYERVEP--GTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESIS
        N PT T S        TTN   +P  Q+ ++ +E+N+      VEP  G+GST RRPRGRPPGSKNK K PVVVTKESP++L+SHVLEI +G+D+ ES++
Subjt:  NIPTTTDSS-------TTNPYSTPLKQSLEAADEENNSGSYERVEP--GTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESIS

Query:  NFAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLP-SPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATY
         FA+RR RGVSVLSG+G+V NVTLR PAA G V++L+G+F+ILS+ GAFLP S +P  A GLT+YLAG QGQVVGG V G LIA+GPVIVIAATF NATY
Subjt:  NFAQRRQRGVSVLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLP-SPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATY

Query:  EQLPLEDEEAAA-------GDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNG-QVSSHDVFWS--PPRAPPPF
        E+LP+E+E+          G K     +++ S + G++   QP M  YNM  N +PNG Q++ HDV+W   PPRAPP +
Subjt:  EQLPLEDEEAAA-------GDKSGNSQNNSTSQSMGDQQQQQPSMGNYNMTSNLVPNG-QVSSHDVFWS--PPRAPPPF

AT4G14465.1 AT-hook motif nuclear-localized protein 205.2e-6054.81Show/hide
Query:  AADEENNSGSYERVEPGTGS---TTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPAA
        A ++  ++   E  +P  G+     RRPRGRPPGSKNK K P+ VT++SP+ALRSHVLEI  GSD+ ++I++F++RRQRGV VLSG G VANVTLR  AA
Subjt:  AADEENNSGSYERVEPGTGS---TTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPAA

Query:  PGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAAAGDKSGNSQNNSTSQSMGD
        PG V++LQGRF+ILSL+GAFLP P+PPG+TGLTVYLAG QGQVVGG VVG L+A G V+VIAATF+NATYE+LP+E+EE   G +  +   +S  +   +
Subjt:  PGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAAAGDKSGNSQNNSTSQSMGD

Query:  QQQQQPSMG-NYNMTSNLVPN--GQVSSHDVFWSPPRAP
                G  YNM  +L+PN  GQ+      W   R P
Subjt:  QQQQQPSMG-NYNMTSNLVPN--GQVSSHDVFWSPPRAP

AT4G22810.1 Predicted AT-hook DNA-binding family protein1.8e-5753.56Show/hide
Query:  DEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPA---APG
        D    SG       G    TRRPRGRP GSKNK KPP+++T++S +ALR+HV+EIG G D+VES++ FA+RRQRGV V+SG G V NVT+R P    +PG
Subjt:  DEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPA---APG

Query:  NVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAAAGDKSGNSQNNSTSQSMGDQQ
        +V++L GRF+ILSLSG+FLP PAPP ATGL+VYLAGGQGQVVGG VVG L+  GPV+V+AA+F+NA YE+LPLE++E       G    +  S  M  QQ
Subjt:  NVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAAAGDKSGNSQNNSTSQSMGDQQ

Query:  ---QQQPSMGNYNMTSNLVPNGQV-SSHD-VFWSPPRAP
           QQQ   G+  +  NL+ + Q+   HD  +WS  R P
Subjt:  ---QQQPSMGNYNMTSNLVPNGQV-SSHD-VFWSPPRAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTCGATGGTGGGCTGAAAATATACCCACCACCACAGATAGCAGCACCACCAACCCTTATTCGACTCCATTAAAGCAAAGCTTAGAAGCTGCGGATGAAGAAAA
CAACTCCGGCAGCTATGAGAGAGTTGAACCAGGCACCGGCTCCACCACGCGCCGCCCACGTGGTCGGCCGCCGGGATCCAAAAACAAGATGAAGCCTCCGGTGGTAGTCA
CCAAGGAGAGCCCCGATGCTCTCCGGAGCCACGTTTTAGAAATCGGCAGCGGCAGCGATATCGTCGAAAGCATCTCGAACTTCGCTCAACGCCGCCAGCGAGGGGTTTCT
GTCCTCAGTGGAAATGGGGTTGTCGCCAATGTCACTCTAAGGCATCCGGCCGCCCCTGGCAACGTTATTACTCTACAGGGACGGTTTGATATATTGTCGCTCTCCGGTGC
CTTTTTGCCTTCCCCTGCTCCACCAGGGGCTACCGGACTAACAGTCTACTTGGCTGGTGGGCAGGGGCAGGTCGTTGGTGGCATTGTCGTCGGTGCTCTCATCGCAACCG
GTCCAGTTATTGTCATCGCTGCTACCTTCACCAATGCCACATACGAGCAGCTACCGCTTGAGGATGAGGAGGCAGCTGCCGGAGACAAGTCCGGAAATAGCCAAAACAAT
TCAACTTCTCAGAGCATGGGGGATCAGCAACAGCAGCAGCCTTCAATGGGAAATTACAATATGACTTCAAATTTGGTGCCAAATGGTCAGGTTTCTTCGCATGATGTGTT
TTGGAGTCCTCCTCGAGCCCCACCTCCATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTCGATGGTGGGCTGAAAATATACCCACCACCACAGATAGCAGCACCACCAACCCTTATTCGACTCCATTAAAGCAAAGCTTAGAAGCTGCGGATGAAGAAAA
CAACTCCGGCAGCTATGAGAGAGTTGAACCAGGCACCGGCTCCACCACGCGCCGCCCACGTGGTCGGCCGCCGGGATCCAAAAACAAGATGAAGCCTCCGGTGGTAGTCA
CCAAGGAGAGCCCCGATGCTCTCCGGAGCCACGTTTTAGAAATCGGCAGCGGCAGCGATATCGTCGAAAGCATCTCGAACTTCGCTCAACGCCGCCAGCGAGGGGTTTCT
GTCCTCAGTGGAAATGGGGTTGTCGCCAATGTCACTCTAAGGCATCCGGCCGCCCCTGGCAACGTTATTACTCTACAGGGACGGTTTGATATATTGTCGCTCTCCGGTGC
CTTTTTGCCTTCCCCTGCTCCACCAGGGGCTACCGGACTAACAGTCTACTTGGCTGGTGGGCAGGGGCAGGTCGTTGGTGGCATTGTCGTCGGTGCTCTCATCGCAACCG
GTCCAGTTATTGTCATCGCTGCTACCTTCACCAATGCCACATACGAGCAGCTACCGCTTGAGGATGAGGAGGCAGCTGCCGGAGACAAGTCCGGAAATAGCCAAAACAAT
TCAACTTCTCAGAGCATGGGGGATCAGCAACAGCAGCAGCCTTCAATGGGAAATTACAATATGACTTCAAATTTGGTGCCAAATGGTCAGGTTTCTTCGCATGATGTGTT
TTGGAGTCCTCCTCGAGCCCCACCTCCATTCTAA
Protein sequenceShow/hide protein sequence
MASRWWAENIPTTTDSSTTNPYSTPLKQSLEAADEENNSGSYERVEPGTGSTTRRPRGRPPGSKNKMKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVS
VLSGNGVVANVTLRHPAAPGNVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVVGGIVVGALIATGPVIVIAATFTNATYEQLPLEDEEAAAGDKSGNSQNN
STSQSMGDQQQQQPSMGNYNMTSNLVPNGQVSSHDVFWSPPRAPPPF