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CmoCh04G002410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G002410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPlant protein 1589 of unknown function
Genome locationCmo_Chr04:1208181..1208878
RNA-Seq ExpressionCmoCh04G002410
SyntenyCmoCh04G002410
Gene Ontology termsGO:0032502 - developmental process (biological process)
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600072.1 hypothetical protein SDJN03_05305, partial [Cucurbita argyrosperma subsp. sororia]6.7e-4196.84Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITS--TVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN
        MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITS  TVWKELEKENREFFEAYSESRTIDDRILAEEET+RLIQRMMSKQDTDN
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITS--TVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN

XP_022139201.1 uncharacterized protein LOC111010170 [Momordica charantia]3.0e-3381.52Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD
        MADSSAAYIHMVQ LIE CLIF MNK+ECMEA+SKHANI+P+ITSTVWKELEKENREFFEAY ESR  +DRILAEEETR+LI+RM+SK   D
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD

XP_022943203.1 uncharacterized protein LOC111448003 [Cucurbita moschata]9.3e-43100Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN
        MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN

XP_022986049.1 uncharacterized protein LOC111483901 [Cucurbita maxima]3.9e-4196.77Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN
        MADS AAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQR+MSKQDTD+
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN

XP_023547240.1 uncharacterized protein LOC111806113 [Cucurbita pepo subsp. pepo]1.0e-4197.85Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN
        MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRIL EEETRRLIQRMMSKQDTD+
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN

TrEMBL top hitse value%identityAlignment
A0A0A0KQ71 Uncharacterized protein3.2e-3381.52Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD
        MADSSAAYIHMVQ LIE CLIF MNK+EC+EA+SKHANI+P+ITSTVWKELEKENREFFEAYSE +  +DRILAEEETR+LIQRMMSK   D
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD

A0A5A7V1X1 Uncharacterized protein2.1e-3280.43Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD
        MADSSAAYIHMVQ LIE CLIF MNK+EC+EA+SKHANI+PVITSTVWKELEKENREFFEAYSE +  +DRILAEEETR+LIQRMM  + +D
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD

A0A6J1CBZ2 uncharacterized protein LOC1110101702.5e-3381.52Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD
        MADSSAAYIHMVQ LIE CLIF MNK+ECMEA+SKHANI+P+ITSTVWKELEKENREFFEAY ESR  +DRILAEEETR+LI+RM+SK   D
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD

A0A6J1FWJ0 uncharacterized protein LOC1114480034.5e-43100Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN
        MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN

A0A6J1JF00 uncharacterized protein LOC1114839011.9e-4196.77Show/hide
Query:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN
        MADS AAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQR+MSKQDTD+
Subjt:  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.2 Plant protein 1589 of unknown function2.8e-1350Show/hide
Query:  AYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAY
        +YI MVQ +IE C++ RM ++EC++A+  HA+I P++T TVW+ L++EN++FFE Y
Subjt:  AYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAY

AT1G10657.3 Plant protein 1589 of unknown function2.8e-1350Show/hide
Query:  AYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAY
        +YI MVQ +IE C++ RM ++EC++A+  HA+I P++T TVW+ L++EN++FFE Y
Subjt:  AYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAY

AT3G28990.1 Plant protein 1589 of unknown function2.3e-2360.71Show/hide
Query:  SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMS
        S A YIH+VQ +IE CL F M+KEECMEA+S++ANINP+ITSTVWKEL KEN++FFE Y E + +    ++EEET +LIQ ++S
Subjt:  SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMS

AT3G55240.1 Plant protein 1589 of unknown function7.6e-2762.77Show/hide
Query:  MAD-SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN
        MAD SSA+YIHMVQ +IE CLIF M+KEEC+EA+SKHANI PVITSTVWKELEKEN+EFF+AY E ++  ++ ++EEET ++IQ+++S    ++
Subjt:  MAD-SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN

AT5G02580.1 Plant protein 1589 of unknown function1.9e-2258.82Show/hide
Query:  SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSK
        S A+YIH+V  LIE C++F M KEECM+A+ KHANI P+ITSTVWKEL KEN+EFFEAY   R   + I  E+ET R I+ ++S+
Subjt:  SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTGCAACGCTTGATTGAAATGTGTTTGATCTTCCGTATGAATAAAGAAGAGTGCATGGAAGCTGTTTCTAAACACGC
CAATATCAACCCTGTAATCACCTCTACTGTGTGGAAGGAATTAGAGAAAGAAAATAGAGAGTTCTTTGAAGCTTATTCGGAGTCTCGAACCATAGACGATAGAATATTAG
CTGAAGAAGAGACAAGACGGTTGATCCAAAGGATGATGTCCAAACAAGATACCGATAACTAG
mRNA sequenceShow/hide mRNA sequence
CTATTTATACACAAATTTTCTTAAAACAATTGATCCCATAAGCTCTTCACAACAAATATAATGGCTGATTCTTCTGCTGCTTACATTCATATGGTGCAACGCTTGATTGA
AATGTGTTTGATCTTCCGTATGAATAAAGAAGAGTGCATGGAAGCTGTTTCTAAACACGCCAATATCAACCCTGTAATCACCTCTACTGTGTGGAAGGAATTAGAGAAAG
AAAATAGAGAGTTCTTTGAAGCTTATTCGGAGTCTCGAACCATAGACGATAGAATATTAGCTGAAGAAGAGACAAGACGGTTGATCCAAAGGATGATGTCCAAACAAGAT
ACCGATAACTAGCAAATTCTATATGCGTGCATGCACCGATTACCTAGATAGCATGAGACGAGTTACATTGTTCATATCCAATTGAAATATGTTATGTGGCCATCTTGTCA
AAAAATAAGGGTCATTATGTAGTTTACTCGTACTCGATATGATATATATTTACAATGAATTATTTTTTATTTTTTTG
Protein sequenceShow/hide protein sequence
MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRMMSKQDTDN