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CmoCh04G002740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G002740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLow temperature and salt responsive protein family
Genome locationCmo_Chr04:1387150..1388539
RNA-Seq ExpressionCmoCh04G002740
SyntenyCmoCh04G002740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030774.1 Hydrophobic protein RCI2A, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3781.82Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLSCDIIIDMINRIYDKIYGESETLS-LYANN
        MGSETFVEIILAILLPPLGVFLRYGCG                  VEFWICLLLTILGYIPGIIYAIYVLSCDIIIDMINRIYDKIYGESETLS LYANN
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLSCDIIIDMINRIYDKIYGESETLS-LYANN

Query:  KTCWQWAGIF
        KTC QWAGIF
Subjt:  KTCWQWAGIF

OAY63743.1 Low temperature-induced protein [Ananas comosus]9.1e-1671.43Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETF+E+ILAILLPP+GVFLRYGCGV  +F     + ++ +  VEFWI LLLTILGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

RLN28887.1 hypothetical protein C2845_PM05G11010 [Panicum miliaceum]9.1e-1672.86Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETF+EI+LAILLPPLGVFLRYG GV     S  S+       VEFWICLLLTILGYIPGIIYA+YVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

RXI09091.1 hypothetical protein DVH24_023235 [Malus domestica]9.1e-1672.86Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETF+E+ILAI+LPP+GVFLRYGC V S  F+P+S        VEFWICLLLTILGYIPGIIYA+YVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

XP_022941664.1 low temperature-induced protein lt101.2 [Cucurbita moschata]2.0e-1574.29Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETFVEIILAILLPPLGVFLRYGCG                  VEFWICLLLTILGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

TrEMBL top hitse value%identityAlignment
A0A199UU07 Low temperature-induced protein4.4e-1671.43Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETF+E+ILAILLPP+GVFLRYGCGV  +F     + ++ +  VEFWI LLLTILGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

A0A3L6SX62 Uncharacterized protein4.4e-1672.86Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETF+EI+LAILLPPLGVFLRYG GV     S  S+       VEFWICLLLTILGYIPGIIYA+YVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

A0A498KPS6 Uncharacterized protein4.4e-1672.86Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETF+E+ILAI+LPP+GVFLRYGC V S  F+P+S        VEFWICLLLTILGYIPGIIYA+YVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

A0A6J1FUC5 low temperature-induced protein lt101.29.8e-1674.29Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETFVEIILAILLPPLGVFLRYGCG                  VEFWICLLLTILGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

A0A6J1KKG3 low temperature-induced protein lt101.29.8e-1674.29Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETFVEIILAILLPPLGVFLRYGCG                  VEFWICLLLTILGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

SwissProt top hitse value%identityAlignment
P68178 Salt stress-induced hydrophobic peptide ESI31.5e-1361.43Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGS T +E+ILAI+LPP+GVFLRY  G                  VEFWICLLLTILGYIPGIIYA+YVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

P68179 Low temperature-induced protein lt101.11.5e-1361.43Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGS T +E+ILAI+LPP+GVFLRY  G                  VEFWICLLLTILGYIPGIIYA+YVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

Q9ARD5 Low temperature-induced protein lt101.25.2e-1460Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        M S TF+E+ILAI+LPP+GVFLRYG                   +VEFWICLLLT+LGYIPGIIYA+YVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

Q9ZNQ7 Hydrophobic protein RCI2A3.6e-1561.97Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS
        M + TFV+II+AILLPPLGVFLR+GCG                  VEFWICL+LT+LGYIPGIIYAIYVL+
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS

Q9ZNS6 Hydrophobic protein RCI2B4.4e-1352.11Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS
        M + TFVEIILAI+LPPLGVFL++GC                   VEFWICL+LT+ GY+PGI+YA+Y+++
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family9.4e-1149.3Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS
        MGS  F+E++ AI +PP+GVFLRYG G                  +EFW+CLLLT+  +IPG+IYAIYVL+
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS

AT2G38905.1 Low temperature and salt responsive protein family9.4e-1971.43Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        MGSETF+EIILAILLPP+GVFLRYGCG                  VEFWICLLLTILGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL

AT3G05880.1 Low temperature and salt responsive protein family2.6e-1661.97Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS
        M + TFV+II+AILLPPLGVFLR+GCG                  VEFWICL+LT+LGYIPGIIYAIYVL+
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS

AT3G05890.1 Low temperature and salt responsive protein family3.1e-1452.11Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS
        M + TFVEIILAI+LPPLGVFL++GC                   VEFWICL+LT+ GY+PGI+YA+Y+++
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLS

AT4G30650.1 Low temperature and salt responsive protein family2.1e-1055.22Show/hide
Query:  ETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL
        E F EI++AILLPPLGV L+ GC                  +VEF ICL+LTILGYIPGIIYA+YV+
Subjt:  ETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTGAAACTTTTGTAGAAATCATATTAGCAATTCTTCTTCCACCACTTGGAGTTTTCCTTCGCTATGGCTGTGGGGTGATGTCTCAATTCTTCTCTCCAAATTC
TGTTTTCATTTTACAACATTTCTCTGTAGAGTTTTGGATTTGTTTGTTGCTGACCATATTGGGATATATCCCTGGAATTATATATGCAATATATGTGCTGAGCTGCGATA
TTATCATAGATATGATAAATAGAATCTACGATAAAATCTATGGAGAGTCGGAGACACTTTCCTTGTATGCTAACAATAAAACTTGTTGGCAATGGGCCGGAATTTTTGTT
TTTAGCAAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTGAAACTTTTGTAGAAATCATATTAGCAATTCTTCTTCCACCACTTGGAGTTTTCCTTCGCTATGGCTGTGGGGTGATGTCTCAATTCTTCTCTCCAAATTC
TGTTTTCATTTTACAACATTTCTCTGTAGAGTTTTGGATTTGTTTGTTGCTGACCATATTGGGATATATCCCTGGAATTATATATGCAATATATGTGCTGAGCTGCGATA
TTATCATAGATATGATAAATAGAATCTACGATAAAATCTATGGAGAGTCGGAGACACTTTCCTTGTATGCTAACAATAAAACTTGTTGGCAATGGGCCGGAATTTTTGTT
TTTAGCAAAAACTGA
Protein sequenceShow/hide protein sequence
MGSETFVEIILAILLPPLGVFLRYGCGVMSQFFSPNSVFILQHFSVEFWICLLLTILGYIPGIIYAIYVLSCDIIIDMINRIYDKIYGESETLSLYANNKTCWQWAGIFV
FSKN