; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G003100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G003100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1
Genome locationCmo_Chr04:1541830..1544265
RNA-Seq ExpressionCmoCh04G003100
SyntenyCmoCh04G003100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600134.1 hypothetical protein SDJN03_05367, partial [Cucurbita argyrosperma subsp. sororia]3.3e-4453.85Show/hide
Query:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSEKLAKDRETIVEVENVVIRSLGDLNFGC
        MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV                              
Subjt:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSEKLAKDRETIVEVENVVIRSLGDLNFGC

Query:  PCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQYSVNSIDIFVAIHMTYFSQY
                                                                        ADDEGK VCFITKILQYSVNSIDIFVAIHMTYFSQY
Subjt:  PCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQYSVNSIDIFVAIHMTYFSQY

Query:  MNHSGAVL
        MNHSGAV+
Subjt:  MNHSGAVL

KAG7030800.1 hypothetical protein SDJN02_04837, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-14179.48Show/hide
Query:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSEKLAKDR-ETIVEVENVVIRSLGDLNFG
        MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVS  L        ++ EN+   ++      
Subjt:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSEKLAKDR-ETIVEVENVVIRSLGDLNFG

Query:  CP------------CFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQYSVNSID
         P            C     + + L IFGEYCMWSTEVLGHYWWSLSPKMVIAL+EGKLPGAPFASRTSILSAQNHLADDEGK VCFITKILQYSVNSID
Subjt:  CP------------CFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQYSVNSID

Query:  IFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAVAFAA---------------------VICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQ
        IFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAVAFAA                     VICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQ
Subjt:  IFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAVAFAA---------------------VICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQ

Query:  LLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP
        LLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP
Subjt:  LLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP

XP_008446243.1 PREDICTED: uncharacterized protein LOC103489034 isoform X1 [Cucumis melo]1.2e-2046.55Show/hide
Query:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSL
        YGCALV    VSPAKI+ FNGL +PTF  FPS V   VNC LT SV YR+ PI A YV  +PI EF  V        +S+KLAKDRET            
Subjt:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSL

Query:  GDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD
            FG     + ++  +  IFGEY        G         M IALNE KLPGAP A+RTS+L AQN+L +D
Subjt:  GDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD

XP_022151033.1 protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia]2.3e-2145.76Show/hide
Query:  LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRS
        L+GCAL+L S   PAKI+CFNGLLHPTF PFPS V  FVNC  T S  YR+ P+  ++V  DPI EF           +S+KLA+DR T           
Subjt:  LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRS

Query:  LGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSP--KMVIALNEGKLPGAPFASRTSILSAQNHLADD
          DL+F               IFGEY     E  G     + P   M IALNE KLPGA  A+RTS+L AQNHL  D
Subjt:  LGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSP--KMVIALNEGKLPGAPFASRTSILSAQNHLADD

XP_023553226.1 uncharacterized protein LOC111810699 [Cucurbita pepo subsp. pepo]8.5e-4855.56Show/hide
Query:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRS
        MGRVLYG A+VLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDP+AEFVV+        VSEKLAKDRETIVE        
Subjt:  MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRS

Query:  LGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQYSVNSIDIFVAI
                                                                                ADDEGK VCFITKILQYSVN IDIFVAI
Subjt:  LGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQYSVNSIDIFVAI

Query:  HMTYFSQYMNHSGAVL
         MTYFSQYMNHSGAV+
Subjt:  HMTYFSQYMNHSGAVL

TrEMBL top hitse value%identityAlignment
A0A1S3BEK8 uncharacterized protein LOC103489034 isoform X15.6e-2146.55Show/hide
Query:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSL
        YGCALV    VSPAKI+ FNGL +PTF  FPS V   VNC LT SV YR+ PI A YV  +PI EF  V        +S+KLAKDRET            
Subjt:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSL

Query:  GDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD
            FG     + ++  +  IFGEY        G         M IALNE KLPGAP A+RTS+L AQN+L +D
Subjt:  GDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD

A0A5A7SZ04 Uncharacterized protein5.6e-2146.55Show/hide
Query:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSL
        YGCALV    VSPAKI+ FNGL +PTF  FPS V   VNC LT SV YR+ PI A YV  +PI EF  V        +S+KLAKDRET            
Subjt:  YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSL

Query:  GDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD
            FG     + ++  +  IFGEY        G         M IALNE KLPGAP A+RTS+L AQN+L +D
Subjt:  GDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD

A0A6J1DB25 protein PLASTID REDOX INSENSITIVE 2-like1.1e-2145.76Show/hide
Query:  LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRS
        L+GCAL+L S   PAKI+CFNGLLHPTF PFPS V  FVNC  T S  YR+ P+  ++V  DPI EF           +S+KLA+DR T           
Subjt:  LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRS

Query:  LGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSP--KMVIALNEGKLPGAPFASRTSILSAQNHLADD
          DL+F               IFGEY     E  G     + P   M IALNE KLPGA  A+RTS+L AQNHL  D
Subjt:  LGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSP--KMVIALNEGKLPGAPFASRTSILSAQNHLADD

A0A6J1GYK9 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X13.8e-1741.81Show/hide
Query:  YGCALV---LVSPAKISCFNGLLHPTFCPFPSRVT--FVNCNLTLSVGYRSNPIVAEYVCL--DPIAEFVVV--------VSEKLAKDRETIVEVENVVI
        Y C LV    VSPAK +CFNGL +PTF P  S +   FVNC LT S+ YR+ P  A   C+  DPI EF  V        +S+KLAKDRET     + V+
Subjt:  YGCALV---LVSPAKISCFNGLLHPTFCPFPSRVT--FVNCNLTLSVGYRSNPIVAEYVCL--DPIAEFVVV--------VSEKLAKDRETIVEVENVVI

Query:  RSLGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD
                               IF EY        G         M IALNE KLPGAP A+RTS+L AQN+L  D
Subjt:  RSLGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD

A0A6J1JDH3 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X12.2e-1742.53Show/hide
Query:  YGCALV---LVSPAKISCFNGLLHPTFCPFPS-RVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSL
        Y C LV    VSPAK +CFNGL +PTF P  S    FVNC LT S+ YR+ P  A  V  DPI EF  V        +S+KLAKDRET     + V+   
Subjt:  YGCALV---LVSPAKISCFNGLLHPTFCPFPS-RVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSL

Query:  GDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD
                            IF EY        G         M IALNE KLPGAP A+RTS+L AQN+L  D
Subjt:  GDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAAC
CTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTGTCGGAGA
AGCTAGCGAAGGATCGTGAGACGATTGTGGAGGTTGAAAATGTTGTGATTCGTTCGTTGGGTGATTTGAATTTTGGATGCCCTTGTTTTGGGTTGAAGAATATGTCTGAG
CAGCTACCTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCAATGAGGGGAAACTACC
AGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAGCTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCA
ATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAA
GCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCT
TCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTG
AACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAAC
CTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTGTCGGAGA
AGCTAGCGAAGGATCGTGAGACGATTGTGGAGGTTGAAAATGTTGTGATTCGTTCGTTGGGTGATTTGAATTTTGGATGCCCTTGTTTTGGGTTGAAGAATATGTCTGAG
CAGCTACCTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCAATGAGGGGAAACTACC
AGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAGCTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCA
ATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAA
GCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCT
TCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTG
AACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGAGTAGTGACAAGCCGATAGGCATGGCCAAGAGCAAGAGTGTCATTTGGCCGG
AGAAGCTTGACACGGGTAAACCGCACCGTTTTAGGCTCCCGATTATCTTCCTCAGATTGAGGCAAGGGAATTATAAGAGAAACATAGTGACCCGGATTAGTCCTCATGAC
TTCACTCGCCACCACCGGCCAATACAGCCTCTCAATCCGGCCAGTTGGATGCTGTATAACCAGAGCCGCCGCATCAACCGCCTGGCAATTCCCCATCTGAATGAATTCTG
CAACTGATAGATAGATCGAAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGGAAATAAGTCTCTTTCTATACAGCTTCTGTGCTCGCCAAATGGGTCTACTTAGAAGTG
CATGCCGTCCATTCATATATCTCACACTTTCCAACTAACTCAATGCAACGTGGGTCAAATTTATATCGAAAATTGACAATGTAACCCACGGAGATTAGAGCATTAAAAAA
AAAATTACCTTTTTATACGTTCGATGATAAAAACTTAAAACTTTGTGATTTTGGCTTTTATTATTTTTCAATTAAAAC
Protein sequenceShow/hide protein sequence
MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSE
QLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQYSVNSIDIFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQ
AFGLAAVAFAAVICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQLLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP