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CmoCh04G003320 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G003320
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25
Genome locationCmo_Chr04:1622553..1623596
RNA-Seq ExpressionCmoCh04G003320
SyntenyCmoCh04G003320
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030819.1 hypothetical protein SDJN02_04856, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-4497.85Show/hide
Query:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMKQAKELNFMSKVKVPKGPDPIHNRRMGVKGRPPA
        MR EGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMKQAKELNFMSKVKVPKGPDPIHNRR GVKGRPPA
Subjt:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMKQAKELNFMSKVKVPKGPDPIHNRRMGVKGRPPA

XP_011655655.1 uncharacterized protein LOC105435565 [Cucumis sativus]2.1e-1855.56Show/hide
Query:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARS---EFEGSH-MKQAKEL------------NFMSKVKVPKGPDPIHNRR
        M+S  SCC FSY KVLLGAV VG+FVWLL+VG   S      +T SW AA     + EG H MK+A++             NFMSKV+VPKGPDPIHNRR
Subjt:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARS---EFEGSH-MKQAKEL------------NFMSKVKVPKGPDPIHNRR

Query:  MGVKGRPP
        +GVKG PP
Subjt:  MGVKGRPP

XP_022151235.1 uncharacterized protein LOC111019209 [Momordica charantia]8.5e-2054.37Show/hide
Query:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMKQAK----------ELNFMSKVKVPKGPDPIHNRRMGVKGR
        MRSEG+ C FSY K LL A+ VG+F+W+L+VG+P+S ER   +TT+   A     GSH+KQ K          +LNFMSKV+VPKGPDPIHNRR+G+ G 
Subjt:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMKQAK----------ELNFMSKVKVPKGPDPIHNRRMGVKGR

Query:  PPA
        PP+
Subjt:  PPA

XP_023884840.1 CLAVATA3/ESR (CLE)-related protein 25-like [Quercus suber]1.5e-0846.99Show/hide
Query:  FKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHM---KQAKELNFMSKVKVPKGPDPIHNRRMGVKGRPP
        FK++LGA+A+  F++LL+VG  +SG   M  T S  +  + F+G          +LN+MSK +VP GPDPIHNRR G  GRPP
Subjt:  FKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHM---KQAKELNFMSKVKVPKGPDPIHNRRMGVKGRPP

XP_038891924.1 uncharacterized protein LOC120081268 [Benincasa hispida]1.5e-2165.05Show/hide
Query:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSH-MKQAKEL----------NFMSKVKVPKGPDPIHNRRMGVKG
        MRS  SC  FSY KVLLGAV VG+FVWLLIVG    G      T+  PAA SE EGSH MKQA+EL          NFMSKVKVPKGPDPIHNRR+GVKG
Subjt:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSH-MKQAKEL----------NFMSKVKVPKGPDPIHNRRMGVKG

Query:  RPP
         PP
Subjt:  RPP

TrEMBL top hitse value%identityAlignment
A0A0A0KQF7 Uncharacterized protein1.0e-1855.56Show/hide
Query:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARS---EFEGSH-MKQAKEL------------NFMSKVKVPKGPDPIHNRR
        M+S  SCC FSY KVLLGAV VG+FVWLL+VG   S      +T SW AA     + EG H MK+A++             NFMSKV+VPKGPDPIHNRR
Subjt:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARS---EFEGSH-MKQAKEL------------NFMSKVKVPKGPDPIHNRR

Query:  MGVKGRPP
        +GVKG PP
Subjt:  MGVKGRPP

A0A2P2NNP3 Uncharacterized protein2.5e-0947.37Show/hide
Query:  SEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMK--QAKELNF---MSKVKVPKGPDPIHNRRMGVKGRPP
        S GS     +FKVL+GA+A+  FVW+L+VG  +SG      TTS    + E      K     EL+F   MSK KVP GPDPIHNRR G   RPP
Subjt:  SEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMK--QAKELNF---MSKVKVPKGPDPIHNRRMGVKGRPP

A0A6J1DAM7 uncharacterized protein LOC1110192094.1e-2054.37Show/hide
Query:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMKQAK----------ELNFMSKVKVPKGPDPIHNRRMGVKGR
        MRSEG+ C FSY K LL A+ VG+F+W+L+VG+P+S ER   +TT+   A     GSH+KQ K          +LNFMSKV+VPKGPDPIHNRR+G+ G 
Subjt:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMKQAK----------ELNFMSKVKVPKGPDPIHNRRMGVKGR

Query:  PPA
        PP+
Subjt:  PPA

A0A6M2EKK5 Uncharacterized protein2.1e-0843.93Show/hide
Query:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTT---SWPAARSEFEGSHMKQA-----------KELNF-MSKVKVPKGPDPIHNRRM
        M   GS CS S FKVLLG +A  +FV LL+VG  +SG  S   T+   S  A +++ +  H K              +LN+ MSK +VP GPDPIHNRR 
Subjt:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTT---SWPAARSEFEGSHMKQA-----------KELNF-MSKVKVPKGPDPIHNRRM

Query:  GVKGRPP
        G   RPP
Subjt:  GVKGRPP

B9HU81 Uncharacterized protein2.8e-0843.93Show/hide
Query:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTT---SWPAARSEFEGSHMKQA-----------KELNF-MSKVKVPKGPDPIHNRRM
        M   GS CS S FKVLLG +A  +FV LL+VG  +SG  S   T+   S  A +++ +  H K              +LN+ MSK +VP GPDPIHNRR 
Subjt:  MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTT---SWPAARSEFEGSHMKQA-----------KELNF-MSKVKVPKGPDPIHNRRM

Query:  GVKGRPP
        G   RPP
Subjt:  GVKGRPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGTGAAGGTAGTTGTTGCTCATTTTCTTACTTCAAGGTCTTGCTTGGAGCTGTGGCTGTTGGGATGTTTGTATGGCTTTTAATCGTTGGCATGCCCGACAGCGG
AGAACGGTCGATGGCGAAAACAACAAGCTGGCCGGCAGCTAGGTCTGAGTTTGAGGGAAGCCATATGAAGCAAGCCAAGGAGCTTAACTTCATGAGCAAAGTTAAAGTCC
CTAAAGGACCCGACCCAATTCATAACAGGCGAATGGGAGTAAAAGGACGGCCACCCGCCTGA
mRNA sequenceShow/hide mRNA sequence
TGTGTGTCAATAATAAACAAACAGGCAAGGCAGGGTTTGAGAAAAGTGCAACAGAATCCACCAACCCTATAAAGAAAAAAAAGACAACTCCCTAATTAAACATGCACTCC
CCTTTTCTAAACAAACTCCTCTCCTTCTCCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTCTTCTTCTTCTCATTGCTTGACGCTACTTAAGATAACATACTTCGACCT
ATCGCCGTTGTCATCTTTACCTCTCGAGTCGTAAAGTTAACTAATCTCTCTCGACGTACATAGACAGAAGTATATATATATATATATATATTTATGAGAAGTGAAGGTAG
TTGTTGCTCATTTTCTTACTTCAAGGTCTTGCTTGGAGCTGTGGCTGTTGGGATGTTTGTATGGCTTTTAATCGTTGGCATGCCCGACAGCGGAGAACGGTCGATGGCGA
AAACAACAAGCTGGCCGGCAGCTAGGTCTGAGTTTGAGGGAAGCCATATGAAGCAAGCCAAGGAGCTTAACTTCATGAGCAAAGTTAAAGTCCCTAAAGGACCCGACCCA
ATTCATAACAGGCGAATGGGAGTAAAAGGACGGCCACCCGCCTGACCTTAGGCTTAGGCTTAGGCTTCCTCCAGTTTGAGAGGAACTCATGCCTCTTGGTTCTTCTCAAC
GTTACCCTTCAAACAACATGCCTCTTATTTGTATTCTAATTTCAATAATCCAAAATAAAAAACATCTGGATTGTACATATCTCCCTCTCTCTATGTGTATATATATGGGC
TTGGGCTATTTATTTGTATTCTAATTTTGGTATAGCTTTTAGAAAAGAGAAAAAGGAAAGGAAATAGTTGTTCAAATGAA
Protein sequenceShow/hide protein sequence
MRSEGSCCSFSYFKVLLGAVAVGMFVWLLIVGMPDSGERSMAKTTSWPAARSEFEGSHMKQAKELNFMSKVKVPKGPDPIHNRRMGVKGRPPA