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CmoCh04G003580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G003580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:1746267..1747068
RNA-Seq ExpressionCmoCh04G003580
SyntenyCmoCh04G003580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067663.1 hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa]2.9e-0455.88Show/hide
Query:  ISFVLKLLVCFALLLIAS-PISAMDN-----TPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGY
        IS +LKLL    LL IAS  +SA +N      P IRKMG+EYK   KAVVV K  R  S D PWGGGY
Subjt:  ISFVLKLLVCFALLLIAS-PISAMDN-----TPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGY

KAG6600177.1 hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia]3.4e-29100Show/hide
Query:  MVSLKMISFVLKLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP
        MVSLKMISFVLKLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP
Subjt:  MVSLKMISFVLKLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2382.67Show/hide
Query:  MVSLKMISFV----LKLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP
        ++SL+++ F     + LLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP
Subjt:  MVSLKMISFV----LKLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP

XP_022141390.1 uncharacterized protein LOC111011803 [Momordica charantia]3.1e-0658.67Show/hide
Query:  MVSLKMISFVLKLLVCFALLLIASPISA----MDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP
        M SL+ ISFVLKL   FALLLIAS +SA    +   PRIRK+GMEY+ VGKAV+ AK     S D PW GGY+ P
Subjt:  MVSLKMISFVLKLLVCFALLLIASPISA----MDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP

TrEMBL top hitse value%identityAlignment
A0A5D3DJ60 Uncharacterized protein1.4e-0455.88Show/hide
Query:  ISFVLKLLVCFALLLIAS-PISAMDN-----TPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGY
        IS +LKLL    LL IAS  +SA +N      P IRKMG+EYK   KAVVV K  R  S D PWGGGY
Subjt:  ISFVLKLLVCFALLLIAS-PISAMDN-----TPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGY

A0A6J1CHY3 uncharacterized protein LOC1110118031.5e-0658.67Show/hide
Query:  MVSLKMISFVLKLLVCFALLLIASPISA----MDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP
        M SL+ ISFVLKL   FALLLIAS +SA    +   PRIRK+GMEY+ VGKAV+ AK     S D PW GGY+ P
Subjt:  MVSLKMISFVLKLLVCFALLLIASPISA----MDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCCCTGAAGATGATTTCCTTTGTGTTGAAGCTCCTAGTTTGCTTTGCATTGCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAA
GATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGAGACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCCCTGAAGATGATTTCCTTTGTGTTGAAGCTCCTAGTTTGCTTTGCATTGCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAA
GATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGAGACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG
Protein sequenceShow/hide protein sequence
MVSLKMISFVLKLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP