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CmoCh04G003590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G003590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:1748047..1748425
RNA-Seq ExpressionCmoCh04G003590
SyntenyCmoCh04G003590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]6.2e-1661.73Show/hide
Query:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN---VGRRLIARQLDTSWGGNYSPPPPRRPPPRP
        MASP+A V WK+V F   LL+A +VSAREL G N+V RT  EM    N    G RLIARQLDT+W G+YSPPPPR PPP P
Subjt:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN---VGRRLIARQLDTSWGGNYSPPPPRRPPPRP
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]4.8e-4598.04Show/hide
Query:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRR-PPPRPPCRYTPRPSLPRSRPGSRPLP
        MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRR PPP PPCRYTPRPSLPRSRPGSRPLP
Subjt:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRR-PPPRPPCRYTPRPSLPRSRPGSRPLP

Query:  PR
        PR
Subjt:  PR
KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-1762.96Show/hide
Query:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN---VGRRLIARQLDTSWGGNYSPPPPRRPPPRP
        MASP+A V WK+V F   LL+A +VSAREL G N+V RT  EM    N   VG RLIARQLDT+W G+YSPPPPR PPP P
Subjt:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN---VGRRLIARQLDTSWGGNYSPPPPRRPPPRP
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-4598.02Show/hide
Query:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRRPPPRPPCRYTPRPSLPRSRPGSRPLPP
        MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRR PP PPCRYTPRPSLPRSRPGSRPLPP
Subjt:  MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRRPPPRPPCRYTPRPSLPRSRPGSRPLPP

Query:  R
        R
Subjt:  R
KGN57261.1 hypothetical protein Csa_010292 [Cucumis sativus]3.5e-1159.52Show/hide
Query:  VVFFALLLLAFNVSARELVGTNIVARTVHEM-TIETN--VGRRLIARQLDTSWGGNYSPPPPRRPPPRPPCRYTPRPSLPRSRP
        +VFF+LLLLAFN S      T ++AR   EM  +ETN  +GR+L ARQLDTSW GNYSPPPP RPPP PP R  PRP     RP
Subjt:  VVFFALLLLAFNVSARELVGTNIVARTVHEM-TIETN--VGRRLIARQLDTSWGGNYSPPPPRRPPPRPPCRYTPRPSLPRSRP
TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein1.1e-0758.44Show/hide
Query:  AFVPWKEV-VFFALLLLAFNVSARELVGTNIVARTVHE--MTIETN--VGRRLIARQLDTSWGGNYSPPPPRRPPPR
        A V WK+V +FF LLLLA+N+SAREL     VART  E  +T E N  + RRL  RQLDTSW GNY PPP    PPR
Subjt:  AFVPWKEV-VFFALLLLAFNVSARELVGTNIVARTVHE--MTIETN--VGRRLIARQLDTSWGGNYSPPPPRRPPPR
A0A0A0LB11 Uncharacterized protein1.7e-1159.52Show/hide
Query:  VVFFALLLLAFNVSARELVGTNIVARTVHEM-TIETN--VGRRLIARQLDTSWGGNYSPPPPRRPPPRPPCRYTPRPSLPRSRP
        +VFF+LLLLAFN S      T ++AR   EM  +ETN  +GR+L ARQLDTSW GNYSPPPP RPPP PP R  PRP     RP
Subjt:  VVFFALLLLAFNVSARELVGTNIVARTVHEM-TIETN--VGRRLIARQLDTSWGGNYSPPPPRRPPPRPPCRYTPRPSLPRSRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCCAAGCGCCTTTGTTCCTTGGAAGGAGGTAGTCTTCTTCGCTTTGCTTCTTCTGGCTTTCAACGTTTCCGCTAGGGAACTTGTTGGAACCAACATTGTGGC
TCGCACTGTCCATGAGATGACAATAGAGACGAATGTGGGCAGGAGATTGATTGCAAGACAGTTGGATACCTCTTGGGGAGGAAATTATTCTCCTCCTCCCCCTCGTCGTC
CTCCTCCTCGGCCTCCTTGTCGTTATACTCCTCGTCCTTCTCTTCCTCGTTCTCGTCCCGGTTCCCGTCCTCTTCCTCCACGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCCAAGCGCCTTTGTTCCTTGGAAGGAGGTAGTCTTCTTCGCTTTGCTTCTTCTGGCTTTCAACGTTTCCGCTAGGGAACTTGTTGGAACCAACATTGTGGC
TCGCACTGTCCATGAGATGACAATAGAGACGAATGTGGGCAGGAGATTGATTGCAAGACAGTTGGATACCTCTTGGGGAGGAAATTATTCTCCTCCTCCCCCTCGTCGTC
CTCCTCCTCGGCCTCCTTGTCGTTATACTCCTCGTCCTTCTCTTCCTCGTTCTCGTCCCGGTTCCCGTCCTCTTCCTCCACGCTGA
Protein sequenceShow/hide protein sequence
MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRRPPPRPPCRYTPRPSLPRSRPGSRPLPPR