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CmoCh04G003630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G003630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:1760637..1761136
RNA-Seq ExpressionCmoCh04G003630
SyntenyCmoCh04G003630
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]1.6e-35100Show/hide
Query:  MASTNVSVSWRAVFFIAMLLMASNVSSRKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY
        MASTNVSVSWRAVFFIAMLLMASNVSSRKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY
Subjt:  MASTNVSVSWRAVFFIAMLLMASNVSSRKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]9.9e-1755.95Show/hide
Query:  MASTNVSVSWRAVFFIAMLLMAS----NVSSRKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY
        MAS  VS+    VFFI MLL++S    NVS+RK LD N P++D FN+++ ASS FY+++GEL++RFE  +K+ TDND+PRGGNY
Subjt:  MASTNVSVSWRAVFFIAMLLMAS----NVSSRKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]4.1e-1555.29Show/hide
Query:  MASTNVSVSWRAVFFIAMLLMAS----NVSSRKLLDANIP-VEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY
        MAS  VS+    +FFI ML ++S    N S+RK LD N P ++D F++++GASS FY+LEGEL+KRFE  +K+ TDND+PRGGNY
Subjt:  MASTNVSVSWRAVFFIAMLLMAS----NVSSRKLLDANIP-VEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY

XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]1.1e-1056.6Show/hide
Query:  RKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY
        +K LD N P++D FN+++ ASS FY+++GEL++RFE  +K+ TDND+PRGGNY
Subjt:  RKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein2.0e-1555.29Show/hide
Query:  MASTNVSVSWRAVFFIAMLLMAS----NVSSRKLLDANIP-VEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY
        MAS  VS+    +FFI ML ++S    N S+RK LD N P ++D F++++GASS FY+LEGEL+KRFE  +K+ TDND+PRGGNY
Subjt:  MASTNVSVSWRAVFFIAMLLMAS----NVSSRKLLDANIP-VEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY

A0A0A0KW84 Uncharacterized protein4.8e-1755.95Show/hide
Query:  MASTNVSVSWRAVFFIAMLLMAS----NVSSRKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY
        MAS  VS+    VFFI MLL++S    NVS+RK LD N P++D FN+++ ASS FY+++GEL++RFE  +K+ TDND+PRGGNY
Subjt:  MASTNVSVSWRAVFFIAMLLMAS----NVSSRKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACGAATGTTTCAGTGAGTTGGAGAGCTGTGTTCTTCATTGCTATGCTTTTAATGGCTTCTAATGTTTCTTCCAGGAAACTTCTTGATGCTAATATCCCTGT
TGAGGATGGCTTCAACGTTGAAATTGGCGCATCTTCCTTCTTCTATGAGTTGGAGGGCGAGCTCGAAAAGAGATTCGAGAGTTTCATAAAATCACACACTGACAATGATG
TTCCTCGAGGTGGAAACTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACGAATGTTTCAGTGAGTTGGAGAGCTGTGTTCTTCATTGCTATGCTTTTAATGGCTTCTAATGTTTCTTCCAGGAAACTTCTTGATGCTAATATCCCTGT
TGAGGATGGCTTCAACGTTGAAATTGGCGCATCTTCCTTCTTCTATGAGTTGGAGGGCGAGCTCGAAAAGAGATTCGAGAGTTTCATAAAATCACACACTGACAATGATG
TTCCTCGAGGTGGAAACTACTAGTTGGATGTGAAATAAGTTTCATGTTCCTTCAATCTTCATTAAGAATCCTTTTGTGCATAATAAAGAGATTAAAGGAACAA
Protein sequenceShow/hide protein sequence
MASTNVSVSWRAVFFIAMLLMASNVSSRKLLDANIPVEDGFNVEIGASSFFYELEGELEKRFESFIKSHTDNDVPRGGNY