; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G004180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G004180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description30S ribosomal protein S11
Genome locationCmo_Chr04:2074939..2077141
RNA-Seq ExpressionCmoCh04G004180
SyntenyCmoCh04G004180
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0048027 - mRNA 5'-UTR binding (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR001971 - Ribosomal protein S11
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600233.1 putative ribosomal protein S11, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]7.6e-13699.59Show/hide
Query:  MSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGIL
        MSSLHFSHGSEISGSVQLDRQDSGCV+LPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGIL
Subjt:  MSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGIL

Query:  EEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKK
        EEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKK
Subjt:  EEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKK

Query:  KKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        KKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

KAG7030891.1 putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-15899.3Show/hide
Query:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
        MRRLPFPHLSSLFRSSSLSHGSSFSS RLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCV+LPRGDSVNVGREIVGRAWKALGAQGPCWGLA
Subjt:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA

Query:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
        RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
Subjt:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL

Query:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022942058.1 probable ribosomal protein S11, mitochondrial [Cucurbita moschata]2.9e-159100Show/hide
Query:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
        MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
Subjt:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA

Query:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
        RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
Subjt:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL

Query:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022999735.1 probable ribosomal protein S11, mitochondrial [Cucurbita maxima]7.5e-15295.1Show/hide
Query:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
        MRRLP PHLSSLFRSSSLSHGSSFSSSR+SISPFFGTD RSPM SLH SHGS++SGSVQLDRQDSGCV+LPRGDSVNVGREIVGRAWKALGAQGPCWGLA
Subjt:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA

Query:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
        RSSENVSVPYSSSSRCYVHYDG PNADTGRNFKSMNFVRGILEEDGM+FMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEEL
Subjt:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL

Query:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYAAEATAEYVGRES+KLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_023526167.1 probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]6.2e-15497.55Show/hide
Query:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
        MRRLP PHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFS GSEISGSVQ+DRQDSGCV+LPRGDSVNVGREIVGRA K LGAQGPCWGLA
Subjt:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA

Query:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
        RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEED MDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
Subjt:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL

Query:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

TrEMBL top hitse value%identityAlignment
A0A0A0KVQ8 Uncharacterized protein6.1e-10773.52Show/hide
Query:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
        M +L   HLSSLFRSSSLS   SFS SRLSISPF G+DA S MSSL   H S+++GS+Q   Q SGC+     DS NVGREIVGR WK++G QGP  GLA
Subjt:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA

Query:  RSSENVSVPYSSSSRCYVHYDGRPN-ADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEE
        R SE VS+PYS SSRCY  YD RPN  DTGRN K MNFVRGILEE+   F G+ QF RP NMEHNADIVH+KLMRNN+F+TVTDNKGNTKLKAS+GRLE 
Subjt:  RSSENVSVPYSSSSRCYVHYDGRPN-ADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEE

Query:  LKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
          GG KLSRY+A++ AEYVGRES+KLGLKSVVMRVKGFT+FKKKKQAILSWRDGFTDS+ DQNPIVY+EDTTRRAHNGCRLPK+RRV
Subjt:  LKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A5A7TPI6 Putative ribosomal protein S112.0e-10271.88Show/hide
Query:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
        M +L   HLS LFRSSSLS   SFS SRLSISPF G+DA S  SS   SH   ++GS+Q     SG          +VGREIVGR WKA+G QGP WGLA
Subjt:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA

Query:  RSSENVSVPYSSSSRCYVHYDGRPN-ADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEE
        RS+E+VSVPYS SSRCY  YD RPN  DTGRN K++NFVRGILEED   F    Q+ RP NMEHNADIVH+KLMRNN F+TVTDNKGNTKLKAS+GRLEE
Subjt:  RSSENVSVPYSSSSRCYVHYDGRPN-ADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEE

Query:  LK-GGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        LK GG KLSRY+ ++ AEYVGRES+KLGLKSVVMRVKGFT+FKKKKQAILSWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPK+RRV
Subjt:  LK-GGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1CJJ5 probable ribosomal protein S11, mitochondrial1.4e-12281.53Show/hide
Query:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREI-VGRAWKALGAQGPCWGL
        MRRL   HLSSLFRSSSLSHGSS S  R SIS F G+DARSPM+SLH  H S+++GSVQLD Q SGC++LP+GDS++VGR+I VGRAWKALG  G     
Subjt:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREI-VGRAWKALGAQGPCWGL

Query:  ARSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEE
         RS ENVSVPY+ +S+CYVHYD R NADTGRNFKSMNFVRGILEEDG DFM  S FPRPPNME NADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEE
Subjt:  ARSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEE

Query:  LKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1FTT5 probable ribosomal protein S11, mitochondrial1.4e-159100Show/hide
Query:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
        MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
Subjt:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA

Query:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
        RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
Subjt:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL

Query:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1KGF8 probable ribosomal protein S11, mitochondrial3.7e-15295.1Show/hide
Query:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA
        MRRLP PHLSSLFRSSSLSHGSSFSSSR+SISPFFGTD RSPM SLH SHGS++SGSVQLDRQDSGCV+LPRGDSVNVGREIVGRAWKALGAQGPCWGLA
Subjt:  MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLA

Query:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL
        RSSENVSVPYSSSSRCYVHYDG PNADTGRNFKSMNFVRGILEEDGM+FMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEEL
Subjt:  RSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEEL

Query:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYAAEATAEYVGRES+KLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

SwissProt top hitse value%identityAlignment
A8ETK4 30S ribosomal protein S116.7e-1035Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVY
        IVH+    NNT +TVTDN GN    +S+G L   KG  K + +AA+A  E    ++ + G+K+V ++++G    +      +   DG          + +
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        ++D T  AHNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

P26870 Ribosomal protein S11, mitochondrial4.2e-1240.16Show/hide
Query:  NMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKR
        NM+    I +++    NT IT+TD  GNTK  +SSG +   KG  + + YAA+ATAE   R + +LG K V +R+KG  Y K+     L         K 
Subjt:  NMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKR

Query:  DQNPIVYIEDTTRRAHNGCRLPKQRRV
            I  I D T   HNGCR PK+RRV
Subjt:  DQNPIVYIEDTTRRAHNGCRLPKQRRV

P46746 Ribosomal protein S11, mitochondrial3.5e-1134.92Show/hide
Query:  MEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRD
        +E  + IVH++   NNT IT+TD +GNT+   S+G L   K   K + YA+ A AE +  ++   G +++++++KG  Y KK               ++ 
Subjt:  MEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRD

Query:  QNPIVYIEDTTRRAHNGCRLPKQRRV
           I  I++ T  AHNGCR PK+RRV
Subjt:  QNPIVYIEDTTRRAHNGCRLPKQRRV

Q0BYD7 30S ribosomal protein S117.9e-1140Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVY
        IVHV    NNT +T+TD +GNT   +SSG +   KG  K + YAA+  AE   +++K+ GL++V +RV+G    ++     L    G T        +  
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        I DTT   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

Q8VZT8 Probable ribosomal protein S11, mitochondrial2.7e-5157.93Show/hide
Query:  RPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRES
        + N+ +G     ++FVR ++E++G    G     + PN+E NADI+H+K++RNNTF+TVTD+KGN K KA+SG L +LKGG K++ Y A+ATAE +GR +
Subjt:  RPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRES

Query:  KKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        K +GLKSVV++V GFT+F KKK+AI+++RDGFT+S+ DQNPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  KKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV

Arabidopsis top hitse value%identityAlignment
AT1G31817.1 Ribosomal L18p/L5e family protein1.9e-5257.93Show/hide
Query:  RPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRES
        + N+ +G     ++FVR ++E++G    G     + PN+E NADI+H+K++RNNTF+TVTD+KGN K KA+SG L +LKGG K++ Y A+ATAE +GR +
Subjt:  RPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRES

Query:  KKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV
        K +GLKSVV++V GFT+F KKK+AI+++RDGFT+S+ DQNPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  KKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAGACTTCCCTTCCCTCACCTCTCGTCTCTCTTCCGTTCGTCCTCTCTCTCTCATGGCTCTTCGTTCTCCTCTTCTCGCCTCTCCATTTCTCCATTTTTTGGCAC
TGATGCTCGTTCTCCCATGTCCTCTCTCCACTTTTCTCACGGATCGGAGATCTCTGGATCCGTTCAACTAGACAGGCAGGATTCAGGCTGTGTGAACCTTCCACGTGGTG
ATTCTGTGAATGTTGGACGGGAGATTGTAGGACGTGCTTGGAAAGCCTTGGGAGCTCAAGGGCCTTGTTGGGGTTTGGCGCGTTCGAGTGAAAATGTCTCTGTTCCTTAT
TCTTCTAGCTCTAGATGTTATGTACACTACGATGGTCGGCCGAATGCTGATACAGGAAGGAACTTTAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGAAT
GGATTTTATGGGTAGTTCTCAGTTTCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATA
ACAAAGGAAACACAAAGCTTAAGGCCTCTTCTGGCCGTCTTGAAGAACTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCCGAAGCAACTGCAGAGTATGTTGGCCGT
GAATCTAAAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAAACAAGCGATCTTGAGTTGGAGAGATGGTTTTACAGACTC
TAAACGTGATCAAAATCCAATTGTTTACATTGAAGATACTACAAGACGTGCTCACAATGGTTGCAGACTTCCAAAGCAACGCCGTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATTGGGCCGGCAAGTAAGTTAGGGTTTTTTTTCGTTCGACATTCGTATCAACGGAACCTCTGCTGCGGCCGATCGACGACGATGCGGAGACTTCCCTTCCCTCACCTCTC
GTCTCTCTTCCGTTCGTCCTCTCTCTCTCATGGCTCTTCGTTCTCCTCTTCTCGCCTCTCCATTTCTCCATTTTTTGGCACTGATGCTCGTTCTCCCATGTCCTCTCTCC
ACTTTTCTCACGGATCGGAGATCTCTGGATCCGTTCAACTAGACAGGCAGGATTCAGGCTGTGTGAACCTTCCACGTGGTGATTCTGTGAATGTTGGACGGGAGATTGTA
GGACGTGCTTGGAAAGCCTTGGGAGCTCAAGGGCCTTGTTGGGGTTTGGCGCGTTCGAGTGAAAATGTCTCTGTTCCTTATTCTTCTAGCTCTAGATGTTATGTACACTA
CGATGGTCGGCCGAATGCTGATACAGGAAGGAACTTTAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGAATGGATTTTATGGGTAGTTCTCAGTTTCCTA
GACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATAACAAAGGAAACACAAAGCTTAAGGCCTCT
TCTGGCCGTCTTGAAGAACTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCCGAAGCAACTGCAGAGTATGTTGGCCGTGAATCTAAAAAATTGGGGTTGAAATCAGT
TGTGATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAAACAAGCGATCTTGAGTTGGAGAGATGGTTTTACAGACTCTAAACGTGATCAAAATCCAATTGTTTACA
TTGAAGATACTACAAGACGTGCTCACAATGGTTGCAGACTTCCAAAGCAACGCCGTGTCTAGGTGTATGGGACTGGAATCTTGATGATGACGACTTTTTATCTTTGTTGG
AAAGTTTTCCTGGTTCAAATGGATGTAGCTCGCCCTCAAGTTCCTACTTGCCCTTTGCAATAATGATGACAATTGGATGATACATCAGTGTAAAATTTTCCAGGTTTAAA
TTGATGTAGGTTGCCTTCAAGTGTTCACTTACTGCAGTAACGATGATGACGGGATGTTTTTATATACACCAACATCAAATAAGTGTTTTCTTTTTATTCAAGTTCAACGA
CACGTGAGATTGAAAGATTCGAAACAGCCTCTTGATATATGCCTTATCTGTTTGGACTTCATTTGAGATATGCAATATCAACTTTCTCCTTGCAGTTGTGCACCACAAAA
AATTCTTGTGGCCCGTGTCCAATCTTTTTACGTGGCTATAGTTTATTTCCTGTTGTGGATTATACATTTCTCTGATCTTACTTCTATCTCTTGACTCATAGCCTGGAATG
CTTGTTTTACCTTTAGCATGATAGATATTGGTCTCTAATTGTGACCAGATTGCGCCTACCTCATGAAAAGACAAGGGAAAGTAGCTGGTTTGACTACAGGACAGAGAGAG
CTATTACAGTGATTTGATCAACATTTTTGTGTGCTGAATTTCTTATGAAAATTTGCAGGCTTTTTGATCATTGATGGTGGATTTATATTATGTATCTGGTCCCTCAGCAT
GGATGAGCCATGGGCATAGCATGGAGTTGTTTGCTAACAGAGAGCTATTTTTGAACCAGAAAGTGTTAATGCATAGCTCGTAGAGGAAGGTGTTCCACATGGTTCTGAAT
AGAACAAGGATGGAGCAAAAAATAACATGTTATCTACAGGTTCCTTAGTATTATGGCTCATTTCAGGTTACTGCTGCGCCCATGGTTGCCTACTGAGCCTTTTCTGGCGA
CGTGATGTGCTATGGAAATGAATAATGCACTTGTCACTCTGTAATATTAAATGGTAATTTAACCTCGACAATACACGTGTTTATTTTGCAGCAAC
Protein sequenceShow/hide protein sequence
MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPY
SSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGR
ESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV