CuGenDBv2

Gene ID	CmoCh04G004230
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Conserved peptide upstream open reading frame 37
Genome location	Cmo_Chr04:2104942..2106703
RNA-Seq Expression	CmoCh04G004230
Synteny	CmoCh04G004230
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8645821.1 hypothetical protein Csa_023855, partial [Cucumis sativus]

2.0e-22

94.64

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Query:  KVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        KVVMVCQAA+QTRFR LKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Subjt:  KVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

KAG6600237.1 hypothetical protein SDJN03_05470, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-22

98.15

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Query:  KVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKP
        +VVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKP
Subjt:  KVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKP

KAG7014898.1 hypothetical protein SDJN02_22529 [Cucurbita argyrosperma subsp. argyrosperma]

6.4e-21

96.23

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Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQAATQTRFR LKHENGIAGKPTIIVRVIACFQPLQNCQAEYFR LLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

KAG7030896.1 hypothetical protein SDJN02_04933, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-23

98.21

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Query:  KVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        +VVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
Subjt:  KVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

XP_016901746.1 PREDICTED: uncharacterized protein LOC103495379 isoform X2 [Cucumis melo]

4.9e-21

94.34

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Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQAA+QTRFR LKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K458 Uncharacterized protein

2.4e-21

94.34

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Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQAA+QTRFR LKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

A0A1S4E0J3 uncharacterized protein LOC103495379 isoform X2

2.4e-21

94.34

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Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQAA+QTRFR LKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

A0A2P5AUS4 Uncharacterized protein

9.0e-21

92.45

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Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQAA+QTRFR LKHENGIAG+PTIIVRVIACFQPLQ+CQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

A0A5A7PUP4 Conserved peptide upstream open reading frame 37 (Fragment)

6.9e-21

91.07

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Query:  KVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        KVVMVCQAA+QTRFR LKHENGIAG+ TIIVRVIACFQ LQNCQAEYFRHLLKPVT
Subjt:  KVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

W9R7U4 Uncharacterized protein

4.0e-21

94.34

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Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQAA+QTRFR LKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G09461.1 conserved peptide upstream open reading frame 43

3.1e-18

74.07

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Query:  MVCQAATQTRFRTLKHE-NGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MV Q+A QTRFRT K+E NG + +PTI+VRVIACFQP+ NCQAEYFRH+LKPVT
Subjt:  MVCQAATQTRFRTLKHE-NGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

AT5G50011.1 conserved peptide upstream open reading frame 37

3.7e-19

81.13

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Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQ+A QTRFRTLKHE+GI G   I+VRVIACFQPLQ+CQAEYFR LLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

AT5G64341.1 conserved peptide upstream open reading frame 40

5.0e-16

67.92

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Query:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
        MVCQ+  +TRFR LK+E G A + TI+VRVI C+QP+ NCQAEYFR LLKPVT
Subjt:  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

Sequences

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CDS sequence

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ATGTCATATAAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGACACTGAAACACGAGAACGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGAT
CGCATGCTTTCAACCTTTGCAGAATTGTCAGGCCGAGTATTTTCGACACTTACTTAAGCCGGTCACGTAG

mRNA sequence

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ATGTCATATAAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGACACTGAAACACGAGAACGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGAT
CGCATGCTTTCAACCTTTGCAGAATTGTCAGGCCGAGTATTTTCGACACTTACTTAAGCCGGTCACGTAG

Protein sequence

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MSYKVVMVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT

CmoCh04G004230 (gene) of Cucurbita moschata (Rifu) v1 genome