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CmoCh04G004500 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G004500
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:2244209..2245881
RNA-Seq ExpressionCmoCh04G004500
SyntenyCmoCh04G004500
Gene Ontology termsGO:0045488 - pectin metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030919.1 hypothetical protein SDJN02_04956 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-0563.46Show/hide
Query:  MAIVFIGYLHHASGGQGSITDVENDVEERTKSTEEKNLMSGKQFITEVFEGN
        MAIVFIGYLHHASGGQGSITDVENDVE  T  T E  + +    + EV++ N
Subjt:  MAIVFIGYLHHASGGQGSITDVENDVEERTKSTEEKNLMSGKQFITEVFEGN

XP_022942049.1 uncharacterized protein At3g49720-like [Cucurbita moschata]7.7e-2678.65Show/hide
Query:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEEKNLMSGKQFITEVFEGN
        MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVE  T  T E  + +    + EV++ N
Subjt:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEEKNLMSGKQFITEVFEGN

XP_022996876.1 uncharacterized protein At3g49720-like [Cucurbita maxima]5.0e-2590.28Show/hide
Query:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEE
        MTM+LMRQNRVNRY ARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVE  T  T E
Subjt:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEE

XP_023547969.1 uncharacterized protein At3g49720-like [Cucurbita pepo subsp. pepo]3.8e-2577.53Show/hide
Query:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEEKNLMSGKQFITEVFEGN
        MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSI DVENDVE  T  T E  + +    + EV++ N
Subjt:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEEKNLMSGKQFITEVFEGN

TrEMBL top hitse value%identityAlignment
A0A6J1FVH2 uncharacterized protein At3g49720-like3.7e-2678.65Show/hide
Query:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEEKNLMSGKQFITEVFEGN
        MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVE  T  T E  + +    + EV++ N
Subjt:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEEKNLMSGKQFITEVFEGN

A0A6J1K5Y9 uncharacterized protein At3g49720-like2.4e-2590.28Show/hide
Query:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEE
        MTM+LMRQNRVNRY ARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVE  T  T E
Subjt:  MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATGATGTTAATGAGGCAAAATCGAGTAAATCGCTATGCTGCTCGCGGCGCTAATCAATACATAAATTCACTACTGTCAATTTTATCATTCCTATGTCTTCTGAC
GATGGCAATCGTTTTTATAGGATATCTCCATCATGCATCAGGTGGGCAGGGAAGTATCACAGATGTTGAGAATGACGTTGAAGAAAGAACTAAAAGTACAGAAGAAAAGA
ACCTCATGAGTGGAAAACAATTTATAACTGAAGTTTTTGAAGGAAACGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTATGATGTTAATGAGGCAAAATCGAGTAAATCGCTATGCTGCTCGCGGCGCTAATCAATACATAAATTCACTACTGTCAATTTTATCATTCCTATGTCTTCTGAC
GATGGCAATCGTTTTTATAGGATATCTCCATCATGCATCAGGTGGGCAGGGAAGTATCACAGATGTTGAGAATGACGTTGAAGAAAGAACTAAAAGTACAGAAGAAAAGA
ACCTCATGAGTGGAAAACAATTTATAACTGAAGTTTTTGAAGGAAACGATTGA
Protein sequenceShow/hide protein sequence
MTMMLMRQNRVNRYAARGANQYINSLLSILSFLCLLTMAIVFIGYLHHASGGQGSITDVENDVEERTKSTEEKNLMSGKQFITEVFEGND