; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G004510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G004510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMethyltransf_11 domain-containing protein
Genome locationCmo_Chr04:2245982..2247692
RNA-Seq ExpressionCmoCh04G004510
SyntenyCmoCh04G004510
Gene Ontology termsGO:0045488 - pectin metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR044689 - Pectin methyltransferase CGR2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030919.1 hypothetical protein SDJN02_04956 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-9898.86Show/hide
Query:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
        GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
Subjt:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE

Query:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI
        YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFP+SKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNN+
Subjt:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI

XP_022942049.1 uncharacterized protein At3g49720-like [Cucurbita moschata]4.1e-9899.43Show/hide
Query:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
        GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
Subjt:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE

Query:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI
        YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNN+
Subjt:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI

XP_022996876.1 uncharacterized protein At3g49720-like [Cucurbita maxima]1.1e-9596.57Show/hide
Query:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
        G TFCTSEVQT ITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDT+GADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
Subjt:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE

Query:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI
        YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFP+SKFNRSRYNRQAKLRSPSWWKMYLAQRKF+EDAAAKERLNN+
Subjt:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI

XP_023547969.1 uncharacterized protein At3g49720-like [Cucurbita pepo subsp. pepo]1.5e-9798.29Show/hide
Query:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
        GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
Subjt:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE

Query:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI
        YMSSRYLN+TIPEFMRVSRDGIVIFAGHPDFP+SKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNN+
Subjt:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI

XP_038905892.1 probable pectin methylesterase CGR3 [Benincasa hispida]3.8e-6466.29Show/hide
Query:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
        G TFC+ EVQT I LL+EVYD +M KVLYVGPDT S+M ELL D+++Y  WG++PY ++G+D  CWDLI + I+ V+DMKF LPYRE SFSHVI+SDTLE
Subjt:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE

Query:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI
        Y S RYLN TIPE MRVSRDG++IFAG+PD+PI++F R ++NR+AKLRSPSWWK YL QRK EE+ AAK+R   I
Subjt:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI

TrEMBL top hitse value%identityAlignment
A0A1S3BYV5 uncharacterized protein At3g49720-like1.8e-5963.07Show/hide
Query:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELL-EDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTL
        G TFCTSEVQTTI LL+EVYD +M KVLYVGPDT S++ +LL +D+DDY  WG++PY ++ +   CWDLI + I+ V+D+KF LPY E SFSHVI+SDTL
Subjt:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELL-EDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTL

Query:  EYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI
        EY SSRYLN TI E MRVSR+G++IFAG+PD+PIS+F R +++RQAKLRSPSWWK YL Q++ EE+  A++R   I
Subjt:  EYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI

A0A5D3E063 Uncharacterized protein2.2e-4963.33Show/hide
Query:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELL-EDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSD
        MAG TFCTSEVQTTI LL+EVYD +M KVLYVGPDT S++ +LL +D+DDY  WG++PY ++ +   CWDLI + I+ V+D+KF LPY E SFSHVI+SD
Subjt:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELL-EDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSD

Query:  TLEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKL
        TLEY SSRYLN TI E MRVSR+G++IFAG+PD+PIS+F R +++RQ ++
Subjt:  TLEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKL

A0A6J1D594 uncharacterized protein At3g49720-like6.0e-5560.57Show/hide
Query:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
        G  FCT EV+ T+ LL+EVYD  MNKVLYVGPDT S++   L D++DY  WG+DP+  +  DS C DL+++ IV V+D+KFPLPYR+ SFSHV+VSDTLE
Subjt:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE

Query:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI
        Y+SSRYLN T+ E  RVS +G++I+AG+P FP+S+F  +RY+RQAK RSPSWW+ YL QRK EE+ AAK+RL  I
Subjt:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI

A0A6J1FVH2 uncharacterized protein At3g49720-like2.0e-9899.43Show/hide
Query:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
        GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
Subjt:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE

Query:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI
        YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNN+
Subjt:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI

A0A6J1K5Y9 uncharacterized protein At3g49720-like5.4e-9696.57Show/hide
Query:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
        G TFCTSEVQT ITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDT+GADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE
Subjt:  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLE

Query:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI
        YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFP+SKFNRSRYNRQAKLRSPSWWKMYLAQRKF+EDAAAKERLNN+
Subjt:  YMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNI

SwissProt top hitse value%identityAlignment
Q0WPN7 Probable pectin methylesterase CGR33.0e-4349.43Show/hide
Query:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT
        + GD  CT+EVQ  I +LK  Y  +M KVL+VGP+T SV+  LL +++    WG++PYD E ADS C  L+ + +V V+D+KFPLPYR KSFS VIVSD 
Subjt:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT

Query:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNR-SRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER
        L+Y+S RYLN+T+PE  RV+ DG+V+ AG+P    +K    S++ R AK+RS SWW  + +Q   EE+ AA ++
Subjt:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNR-SRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER

Q9M2Y6 Probable pectin methylesterase CGR21.5e-4248.85Show/hide
Query:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT
        + GD  CT+EVQ  I +LK+ Y   M KVL+VGPDT SV+  LL++++    WG++PYD E ADS C   + + +V V+D+KFPLPYR KSFS VIVSD 
Subjt:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT

Query:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKF-NRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER
        L+Y+S +YLN+T+PE  RV+ DG+V+FAG P    +K    S++ R AK+RS SWW  +  Q   EE+ A  ++
Subjt:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKF-NRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER

Arabidopsis top hitse value%identityAlignment
AT3G49720.1 unknown protein1.0e-4348.85Show/hide
Query:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT
        + GD  CT+EVQ  I +LK+ Y   M KVL+VGPDT SV+  LL++++    WG++PYD E ADS C   + + +V V+D+KFPLPYR KSFS VIVSD 
Subjt:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT

Query:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKF-NRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER
        L+Y+S +YLN+T+PE  RV+ DG+V+FAG P    +K    S++ R AK+RS SWW  +  Q   EE+ A  ++
Subjt:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKF-NRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER

AT3G49720.2 unknown protein1.0e-4348.85Show/hide
Query:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT
        + GD  CT+EVQ  I +LK+ Y   M KVL+VGPDT SV+  LL++++    WG++PYD E ADS C   + + +V V+D+KFPLPYR KSFS VIVSD 
Subjt:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT

Query:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKF-NRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER
        L+Y+S +YLN+T+PE  RV+ DG+V+FAG P    +K    S++ R AK+RS SWW  +  Q   EE+ A  ++
Subjt:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKF-NRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER

AT5G65810.1 unknown protein2.1e-4449.43Show/hide
Query:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT
        + GD  CT+EVQ  I +LK  Y  +M KVL+VGP+T SV+  LL +++    WG++PYD E ADS C  L+ + +V V+D+KFPLPYR KSFS VIVSD 
Subjt:  MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDT

Query:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNR-SRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER
        L+Y+S RYLN+T+PE  RV+ DG+V+ AG+P    +K    S++ R AK+RS SWW  + +Q   EE+ AA ++
Subjt:  LEYMSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNR-SRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGTGATACATTTTGCACTTCGGAAGTTCAAACAACAATAACATTGCTAAAGGAAGTATATGACTATAACATGAACAAAGTGTTATATGTTGGCCCTGATACTGG
TTCAGTGATGCCCGAATTGCTCGAAGACAAGGATGATTATGTAGATTGGGGTATGGATCCATATGACACCGAAGGTGCTGATTCGTGCTGCTGGGATCTCATTGAGAGAG
AAATTGTCCATGTTTCTGATATGAAATTTCCGCTGCCTTATCGGGAGAAATCATTTTCTCATGTTATAGTTTCAGATACGTTGGAATATATGTCTTCAAGATACCTTAAC
GAAACAATTCCCGAGTTTATGAGGGTATCTAGAGATGGTATTGTCATATTTGCAGGTCATCCAGATTTTCCAATTTCGAAATTCAACAGATCCAGATACAACCGCCAGGC
CAAACTCCGAAGTCCTTCTTGGTGGAAAATGTATTTAGCTCAAAGGAAGTTTGAAGAAGATGCTGCTGCTAAAGAGAGGCTTAACAATATAGACTTGGCGTGGAATCTTT
TTCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGTGATACATTTTGCACTTCGGAAGTTCAAACAACAATAACATTGCTAAAGGAAGTATATGACTATAACATGAACAAAGTGTTATATGTTGGCCCTGATACTGG
TTCAGTGATGCCCGAATTGCTCGAAGACAAGGATGATTATGTAGATTGGGGTATGGATCCATATGACACCGAAGGTGCTGATTCGTGCTGCTGGGATCTCATTGAGAGAG
AAATTGTCCATGTTTCTGATATGAAATTTCCGCTGCCTTATCGGGAGAAATCATTTTCTCATGTTATAGTTTCAGATACGTTGGAATATATGTCTTCAAGATACCTTAAC
GAAACAATTCCCGAGTTTATGAGGGTATCTAGAGATGGTATTGTCATATTTGCAGGTCATCCAGATTTTCCAATTTCGAAATTCAACAGATCCAGATACAACCGCCAGGC
CAAACTCCGAAGTCCTTCTTGGTGGAAAATGTATTTAGCTCAAAGGAAGTTTGAAGAAGATGCTGCTGCTAAAGAGAGGCTTAACAATATAGACTTGGCGTGGAATCTTT
TTCGGTAA
Protein sequenceShow/hide protein sequence
MAGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLEYMSSRYLN
ETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNIDLAWNLFR