CuGenDBv2

Gene ID	CmoCh04G004660
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Phytosulfokine-beta
Genome location	Cmo_Chr04:2331865..2332396
RNA-Seq Expression	CmoCh04G004660
Synteny	CmoCh04G004660
Gene Ontology terms	GO:0007165 - signal transduction (biological process) GO:0008283 - cell population proliferation (biological process) GO:0030154 - cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016020 - membrane (cellular component) GO:0008083 - growth factor activity (molecular function)
InterPro domains	IPR009438 - Phytosulfokine

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600274.1 Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia]

9.1e-37

96.47

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Query:  MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP
        MASKLVTSIFTFLFLFFFLFSSTTSVFA+PIPGSTN SP TTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP
Subjt:  MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP

KAG7014931.1 Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-22

71.26

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Query:  MASKLVTSIFTFLFLFFFLFSSTTSVFAR--PIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQR
        MASKL+TSIFTFLFLFF   SS T++ A+  P+PG +N  PGT+RDG K  DD LEEESC  IGEE+CLMRKTLAAHADYIYTD QR
Subjt:  MASKLVTSIFTFLFLFFFLFSSTTSVFAR--PIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQR

XP_022149343.1 phytosulfokines-like [Momordica charantia]

6.3e-22

70.45

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Query:  MASKLVTSIFTFLFLFFFLFSST--TSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP
        MASKL+T+ FTFL LFFF F S+   +V ARP+P   N  P TTR G KVVDDVLEEESC GIGEE+CLMRKTLAAH DYIYTD Q P
Subjt:  MASKLVTSIFTFLFLFFFLFSST--TSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP

XP_022922962.1 phytosulfokines-like [Cucurbita moschata]

9.8e-23

72.41

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Query:  MASKLVTSIFTFLFLFFFLFSSTTSVFAR--PIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQR
        MASKL+TSIFTFLFLFF   SS T++ AR  P+PG +N  PGT+RDG K  DD LEEESC  IGEE+CLMRKTLAAHADYIYTD QR
Subjt:  MASKLVTSIFTFLFLFFFLFSSTTSVFAR--PIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQR

XP_022941982.1 phytosulfokines-like [Cucurbita moschata]

7.5e-39

100

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Query:  MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP
        MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP
Subjt:  MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KY18 Phytosulfokine-beta

6.8e-22

71.26

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Query:  MASKLVTSIFTFLFLF-FFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCG-IGEEHCLMRKTLAAHADYIYTDKQRP
        MASKL TSI+ FLFLF FF  SSTT + ARP+PG +N   GT+RDG  V DDVLEEESC  IGEE+CLMRKTLAAH DYIYTD Q+P
Subjt:  MASKLVTSIFTFLFLF-FFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCG-IGEEHCLMRKTLAAHADYIYTDKQRP

A0A6J1D6J2 Phytosulfokine-beta

3.1e-22

70.45

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Query:  MASKLVTSIFTFLFLFFFLFSST--TSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP
        MASKL+T+ FTFL LFFF F S+   +V ARP+P   N  P TTR G KVVDDVLEEESC GIGEE+CLMRKTLAAH DYIYTD Q P
Subjt:  MASKLVTSIFTFLFLFFFLFSST--TSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP

A0A6J1E4U5 Phytosulfokine-beta

4.7e-23

72.41

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Query:  MASKLVTSIFTFLFLFFFLFSSTTSVFAR--PIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQR
        MASKL+TSIFTFLFLFF   SS T++ AR  P+PG +N  PGT+RDG K  DD LEEESC  IGEE+CLMRKTLAAHADYIYTD QR
Subjt:  MASKLVTSIFTFLFLFFFLFSSTTSVFAR--PIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQR

A0A6J1FNZ6 Phytosulfokine-beta

3.6e-39

100

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Query:  MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP
        MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP
Subjt:  MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP

A0A6J1JBS4 Phytosulfokine-beta

1.5e-21

70.11

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Query:  MASKLVTSIFTFLFLFFFLFSSTTSVFAR--PIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQR
        MA KL+TSIFTFLFLFF   SS T++ AR  P+PG +N  PGT+RD  K  DD LEEESC  IGEE+CLMRKTLAAHADYIYTD QR
Subjt:  MASKLVTSIFTFLFLFFFLFSSTTSVFAR--PIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQR

SwissProt top hits

e value

%identity

Alignment

O81003 Phytosulfokines 2

9.6e-05

38.75

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Query:  LFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKV-------VDDV-LEEESCGIGEEHCLMRKTLAAHADYIYTDKQR
        L     L  ST    ARP P + ++S  T  D   +       +DD+ + +E+CG  +E CLMR+TL AH DYIYT K++
Subjt:  LFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKV-------VDDV-LEEESCGIGEEHCLMRKTLAAHADYIYTDKQR

Q9FS10 Phytosulfokines

1.6e-07

39.53

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Query:  MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP
        M+SK +T     L L   LFS + +  ARP      + P  +     V+ + + +E+C G+GEE CLMR+TL AH DYIYT    P
Subjt:  MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP

Q9M2Y0 Phytosulfokines 3

6.0e-07

41.56

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Query:  FTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP
        FT +F+   L  ST +  AR  P +T  +        ++  D +EEESC GIGEE CL+R++L  H DYIYT   +P
Subjt:  FTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP

Arabidopsis top hits

e value

%identity

Alignment

AT2G22860.1 phytosulfokine 2 precursor

6.8e-06

38.75

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Query:  LFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKV-------VDDV-LEEESCGIGEEHCLMRKTLAAHADYIYTDKQR
        L     L  ST    ARP P + ++S  T  D   +       +DD+ + +E+CG  +E CLMR+TL AH DYIYT K++
Subjt:  LFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKV-------VDDV-LEEESCGIGEEHCLMRKTLAAHADYIYTDKQR

AT3G49780.1 phytosulfokine 4 precursor

4.3e-08

41.56

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Query:  FTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP
        FT +F+   L  ST +  AR  P +T  +        ++  D +EEESC GIGEE CL+R++L  H DYIYT   +P
Subjt:  FTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESC-GIGEEHCLMRKTLAAHADYIYTDKQRP

Sequences

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CDS sequence

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mRNA sequence

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ATGGCTTCCAAGCTTGTGACCTCCATCTTCACGTTTCTCTTCCTTTTCTTCTTTTTATTCTCCTCGACGACCTCCGTTTTTGCTCGGCCCATTCCCGGCTCTACAAACAT
GTCTCCTGGGACTACTCGAGACGGGTTTAAGGTTGTGGATGATGTTTTGGAAGAGGAGAGCTGTGGAATTGGAGAAGAACATTGCTTGATGAGGAAAACTCTTGCAGCCC
ATGCTGATTATATCTACACAGATAAGCAAAGACCATGAAGATTATTTGCACCTCATTCTTCGGCTCGAATCTTTGACCTTTTGGTCAAATGTATATTCTTAACCAATTGA
GTTATGTTCCGGTTGATCAAATCCGATATACTAAACTTAAATTTAGTTACTTCTTTCGGGTCATGATATCATATTGTGTATTCCATGTCAACATGTCCGTGCA

Protein sequence

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MASKLVTSIFTFLFLFFFLFSSTTSVFARPIPGSTNMSPGTTRDGFKVVDDVLEEESCGIGEEHCLMRKTLAAHADYIYTDKQRP

CmoCh04G004660 (gene) of Cucurbita moschata (Rifu) v1 genome