CuGenDBv2

Gene ID	CmoCh04G004810
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	pre-mRNA-splicing factor CWC25-like isoform X2
Genome location	Cmo_Chr04:2393791..2398210
RNA-Seq Expression	CmoCh04G004810
Synteny	CmoCh04G004810
Gene Ontology terms	GO:0016070 - RNA metabolic process (biological process) GO:0005622 - intracellular (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600285.1 hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-179

99.7

Show/hide

Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        LNPTE PRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
        REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS

Query:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Subjt:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

XP_022942670.1 pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata]

1.0e-179

100

Show/hide

Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
        REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS

Query:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Subjt:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

XP_022984546.1 pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima]

8.9e-176

98.22

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Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRREARESDSKRYRSRFD+EPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKR+
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
        REKKITPDNENFEKAGMASESKK SDPH PQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS

Query:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Subjt:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

XP_023521659.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo]

1.1e-173

97.63

Show/hide

Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRRE RESDS R+RSRFD E SPKRSRRDRK LEEKLSRNSSSHVEDNKDRDQKHELRHEGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
        REKKITPDNENFEKAGMASESKK SDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS

Query:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Subjt:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

XP_023548006.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo]

9.5e-178

99.11

Show/hide

Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRREARESDSKRYRSRFD+EPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
        REKKITPDNENFEKAGMASESKK SDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS

Query:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Subjt:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV12 Uncharacterized protein

4.1e-134

79.94

Show/hide

Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRREARESDSKR+RSRFD+EPSPKRS+RDRK LEEKLSRNSSSHVEDNK+RDQKHELR  GQD  PHESSLAL+S PEGG   GANRNSD R+GGTK S
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        +NPTEVPRSRSYFQHD+R +AGQVGRSFGRS++S RGWWKDSK+ DK+SDRASGK+ TY SQ+RDE PQ  +ED H    DGSSKLEVD+  PARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKL-SKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPA
        REKKIT DNE+ EK  M  ESKK +D HQ Q+GRERREERGRD RYS+KL +KH  GDMASKRDEMKR GY VRERYGNG GGGNYRGRDRFGGRQGY  
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKL-SKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPA

Query:  SGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        S GTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALL+S
Subjt:  SGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

A0A6J1FPJ0 pre-mRNA-splicing factor CWC25-like isoform X1

4.9e-180

100

Show/hide

Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
        REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS

Query:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Subjt:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

A0A6J1FQX4 pre-mRNA-splicing factor CWC25-like isoform X2

2.7e-170

96.45

Show/hide

Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
        REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKR            GGGGNYRGRDRFGGRQGYPAS
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS

Query:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Subjt:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

A0A6J1J5K1 pre-mRNA-splicing factor CWC25 isoform X1

4.3e-176

98.22

Show/hide

Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRREARESDSKRYRSRFD+EPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKR+
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
        REKKITPDNENFEKAGMASESKK SDPH PQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS

Query:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Subjt:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

A0A6J1JAV5 pre-mRNA-splicing factor CWC25 isoform X2

2.4e-166

94.67

Show/hide

Query:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS
        MSRREARESDSKRYRSRFD+EPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKR+
Subjt:  MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRS

Query:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
        LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF
Subjt:  LNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF

Query:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
        REKKITPDNENFEKAGMASESKK SDPH PQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKR            GGGGNYRGRDRFGGRQGYPAS
Subjt:  REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS

Query:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
        GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Subjt:  GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G19650.1 cyclin-related

2.5e-27

35.73

Show/hide

Query:  SRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKD--RDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGG---
        +RRE+R+SD +R+RSR D+EPSPKRSRRD KP  E++       V D  D  ++ +  LR         ++ L LD+H       G+ ++S+++  G   
Subjt:  SRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKD--RDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGG---

Query:  -TKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPAR
         TK + + ++VPRSR Y QHD R S G+V     R  +S RG W+ S++Q   S+R +G     +  R+DE   + + D    + D    L       +R
Subjt:  -TKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPAR

Query:  KRPAFREKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERG-RDTRYSDKLSKHVTG-DMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRF--
        KRPAFREKKI       E+ G  ++  +  D         R+ ER  R   +S++  +   G D    RD+ +          G G        RDRF  
Subjt:  KRPAFREKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERG-RDTRYSDKLSKHVTG-DMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRF--

Query:  GGRQGYPASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
         GR G+  S     +KW HDLF EAN+SP    EE+QIAKVEALLAS
Subjt:  GGRQGYPASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCACGCCGTGAAGCTCGGGAATCCGACTCCAAGCGCTACCGTTCCAGATTCGATAAAGAACCCAGTCCAAAGAGGTCAAGGAGGGACAGGAAGCCATTAGAGGAGAA
GTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTGCGACATGAGGGACAAGATGCGACACCCCATGAGTCTTCATTAGCAC
TTGATTCTCATCCAGAAGGTGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATGAGAGAGAGGGAGGGACCAAACGTTCATTGAATCCCACTGAAGTACCACGATCACGA
TCTTATTTTCAGCACGACAAACGTGGTAGTGCCGGGCAAGTTGGTCGAAGCTTTGGTCGAAGTTCATCTAGTGGGCGGGGTTGGTGGAAGGATTCAAAGGAACAGGATAA
GAATAGTGACAGGGCATCTGGAAAGACAGCAACTTACAATTCACAGCGAAGAGATGAGATACCACAAACCGTGAAAGAGGATAATCACACAAGGACTCGTGACGGGTCCT
CAAAACTGGAGGTTGATTCATCAGCTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACACCCGACAATGAAAATTTTGAGAAAGCAGGTATGGCATCAGAG
AGTAAGAAACCGAGTGATCCACACCAGCCTCAGGATGGAAGAGAGCGGAGAGAAGAAAGAGGCCGTGACACCCGTTACTCCGATAAACTTAGTAAGCACGTTACTGGAGA
TATGGCTTCCAAAAGGGATGAGATGAAGAGAGGAGGGTACTCGGTGAGAGAAAGGTATGGCAATGGAGGTGGTGGTGGGAATTACAGGGGAAGAGACAGATTTGGTGGGA
GGCAAGGATATCCAGCCAGTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACCCCGAAGAACGAAGAGGACCAAATCGCC
AAGGTTGAAGCTCTTCTTGCTTCATAG

mRNA sequence

Show/hide mRNA sequence

GCAATTTTGAGGATTACTTGCGATATCATCATCACTTCTCCAGGTTCCCGCGAGACGAAGCCCTAACTTCCCATTCTCTGTGTGTTTCACTTTCTTGCTCCATTTTCTTT
GACATAATCAAGAGCGGGAAAGCAAATGTCACGCCGTGAAGCTCGGGAATCCGACTCCAAGCGCTACCGTTCCAGATTCGATAAAGAACCCAGTCCAAAGAGGTCAAGGA
GGGACAGGAAGCCATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTGCGACATGAGGGACAAGATGCG
ACACCCCATGAGTCTTCATTAGCACTTGATTCTCATCCAGAAGGTGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATGAGAGAGAGGGAGGGACCAAACGTTCATTGAA
TCCCACTGAAGTACCACGATCACGATCTTATTTTCAGCACGACAAACGTGGTAGTGCCGGGCAAGTTGGTCGAAGCTTTGGTCGAAGTTCATCTAGTGGGCGGGGTTGGT
GGAAGGATTCAAAGGAACAGGATAAGAATAGTGACAGGGCATCTGGAAAGACAGCAACTTACAATTCACAGCGAAGAGATGAGATACCACAAACCGTGAAAGAGGATAAT
CACACAAGGACTCGTGACGGGTCCTCAAAACTGGAGGTTGATTCATCAGCTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACACCCGACAATGAAAATTT
TGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAACCGAGTGATCCACACCAGCCTCAGGATGGAAGAGAGCGGAGAGAAGAAAGAGGCCGTGACACCCGTTACTCCGATA
AACTTAGTAAGCACGTTACTGGAGATATGGCTTCCAAAAGGGATGAGATGAAGAGAGGAGGGTACTCGGTGAGAGAAAGGTATGGCAATGGAGGTGGTGGTGGGAATTAC
AGGGGAAGAGACAGATTTGGTGGGAGGCAAGGATATCCAGCCAGTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACCCC
GAAGAACGAAGAGGACCAAATCGCCAAGGTTGAAGCTCTTCTTGCTTCATAGGATATGGACTAATTAGATGCCATCTGATTTTGTTGAGTCTTTAGTGAATATGGTTATT
GAAGCATTTGAAATGATGTAGCTTGTGTTCTTCTAAAACATCCTCTCCTGTTTGTTCTACTGCTTCTTCTTGTTTGTCACAACTCAATGTAATTGAATTGCCTGATTCTG
TTCGACCCAAACTACTGCATTTCATAAGAACCTATCTCATTCGAGGTTCGGTTGTCGATCTCGAAACTCAATATTATGTGGTAAATCGATCTTGTTTCC

Protein sequence

Show/hide protein sequence

MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSR
SYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASE
SKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRSPTPKNEEDQIA
KVEALLAS

CmoCh04G004810 (gene) of Cucurbita moschata (Rifu) v1 genome