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CmoCh04G005040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G005040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription factor MYB44-like
Genome locationCmo_Chr04:2511989..2512575
RNA-Seq ExpressionCmoCh04G005040
SyntenyCmoCh04G005040
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600306.1 Transcription factor MYB73, partial [Cucurbita argyrosperma subsp. sororia]5.8e-59100Show/hide
Query:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
        MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
Subjt:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA

Query:  IKNHWNSTLK
        IKNHWNSTLK
Subjt:  IKNHWNSTLK

KAG7030966.1 Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-59100Show/hide
Query:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
        MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
Subjt:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA

Query:  IKNHWNSTLK
        IKNHWNSTLK
Subjt:  IKNHWNSTLK

XP_022941945.1 transcription factor MYB44-like [Cucurbita moschata]5.8e-59100Show/hide
Query:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
        MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
Subjt:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA

Query:  IKNHWNSTLK
        IKNHWNSTLK
Subjt:  IKNHWNSTLK

XP_022982532.1 transcription factor MYB44-like [Cucurbita maxima]4.9e-5899.09Show/hide
Query:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
        MTSEEWDIDRVKG WSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
Subjt:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA

Query:  IKNHWNSTLK
        IKNHWNSTLK
Subjt:  IKNHWNSTLK

XP_023512939.1 transcription factor MYB73-like [Cucurbita pepo subsp. pepo]4.9e-5899.09Show/hide
Query:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
        MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSI GRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
Subjt:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA

Query:  IKNHWNSTLK
        IKNHWNSTLK
Subjt:  IKNHWNSTLK

TrEMBL top hitse value%identityAlignment
A0A5A7T4X0 Transcription factor MYB44-like4.2e-4777.05Show/hide
Query:  IDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNS
        IDRVKGPWSPEED LLR+LVQ  GARNWS+I QSIHGRSGKSCRLRWFNQLCP VER+AFT EED++IVEAH K+GNKWATIARLLNGRTDNAIKNHWNS
Subjt:  IDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNS

Query:  TLKLFESIEIGYERFDSESEQK
        TLK          +F S  E+K
Subjt:  TLKLFESIEIGYERFDSESEQK

A0A6J1E4J2 transcription factor MYB44-like2.6e-4985.45Show/hide
Query:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
        M S +  IDRVKGPWSPEED++LR+LVQ  GARNWS+I QSIHGRSGKSCRLRWFNQLCP VER+AFTAEEDEVI EAHAK+GNKWATIARLLNGRTDNA
Subjt:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA

Query:  IKNHWNSTLK
        IKNHWNSTLK
Subjt:  IKNHWNSTLK

A0A6J1FV84 transcription factor MYB44-like2.8e-59100Show/hide
Query:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
        MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
Subjt:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA

Query:  IKNHWNSTLK
        IKNHWNSTLK
Subjt:  IKNHWNSTLK

A0A6J1IWV0 transcription factor MYB44-like2.4e-5899.09Show/hide
Query:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
        MTSEEWDIDRVKG WSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
Subjt:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA

Query:  IKNHWNSTLK
        IKNHWNSTLK
Subjt:  IKNHWNSTLK

A0A6J1JCR2 transcription factor MYB44-like1.6e-4985.45Show/hide
Query:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA
        M S + +IDRVKGPWSPEED++LR+LVQ  GARNWS+I QSIHGRSGKSCRLRWFNQLCP VER+AFTAEEDEVI EAHAK+GNKWATIARLLNGRTDNA
Subjt:  MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNA

Query:  IKNHWNSTLK
        IKNHWNSTLK
Subjt:  IKNHWNSTLK

SwissProt top hitse value%identityAlignment
O23160 Transcription factor MYB736.1e-4371.82Show/hide
Query:  DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWN
        +++R+KGPWSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE +AF+ EEDE I+ AHA+ GNKWATI+RLLNGRTDNAIKNHWN
Subjt:  DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWN

Query:  STLKLFESIE
        STLK   S+E
Subjt:  STLKLFESIE

Q08759 Transcriptional activator Myb1.7e-3248.25Show/hide
Query:  VKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK
        +KGPW+ EEDQ +  LV +YG + WSVI + + GR GK CR RW N L P+V++ ++T EED  I EAH + GN+WA IA+LL GRTDNAIKNHWNST++
Subjt:  VKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK

Query:  LFESIEIGYERFDSESEQKAFDSSKPISSRNRIIASATAAAEY
          E  E GY +  S++ Q    ++ P S+         A+AE+
Subjt:  LFESIEIGYERFDSESEQKAFDSSKPISSRNRIIASATAAAEY

Q42575 Transcription factor MYB15.0e-3770.59Show/hide
Query:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST
        DRVKGPWS EED +L  LV+R GARNWS I +SI GRSGKSCRLRW NQL P++ R +FT  ED+ I+ AHA HGNKWA IA+LL GRTDNAIKNHWNS 
Subjt:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST

Query:  LK
        L+
Subjt:  LK

Q9FDW1 Transcription factor MYB443.9e-4276.47Show/hide
Query:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST
        DR+KGPWSPEED+ LR LV +YG RNW+VI +SI GRSGKSCRLRW NQL P VE + F+AEEDE I  AHA+ GNKWATIARLLNGRTDNA+KNHWNST
Subjt:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST

Query:  LK
        LK
Subjt:  LK

Q9SN12 Transcription factor MYB771.7e-4074.51Show/hide
Query:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST
        DRVKGPWS EED+ LR +V++YG RNWS I +SI GRSGKSCRLRW NQL P+VE + F+ EEDE IV A A+ GNKWATIARLLNGRTDNA+KNHWNST
Subjt:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST

Query:  LK
        LK
Subjt:  LK

Arabidopsis top hitse value%identityAlignment
AT2G23290.1 myb domain protein 701.1e-4475.96Show/hide
Query:  DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWN
        ++DR+KGPWSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE + FTAEED+ I+ AHA+ GNKWATIARLLNGRTDNAIKNHWN
Subjt:  DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWN

Query:  STLK
        STLK
Subjt:  STLK

AT3G09230.1 myb domain protein 13.5e-3870.59Show/hide
Query:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST
        DRVKGPWS EED +L  LV+R GARNWS I +SI GRSGKSCRLRW NQL P++ R +FT  ED+ I+ AHA HGNKWA IA+LL GRTDNAIKNHWNS 
Subjt:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST

Query:  LK
        L+
Subjt:  LK

AT3G50060.1 myb domain protein 771.2e-4174.51Show/hide
Query:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST
        DRVKGPWS EED+ LR +V++YG RNWS I +SI GRSGKSCRLRW NQL P+VE + F+ EEDE IV A A+ GNKWATIARLLNGRTDNA+KNHWNST
Subjt:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST

Query:  LK
        LK
Subjt:  LK

AT4G37260.1 myb domain protein 734.3e-4471.82Show/hide
Query:  DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWN
        +++R+KGPWSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE +AF+ EEDE I+ AHA+ GNKWATI+RLLNGRTDNAIKNHWN
Subjt:  DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWN

Query:  STLKLFESIE
        STLK   S+E
Subjt:  STLKLFESIE

AT5G67300.1 myb domain protein r12.8e-4376.47Show/hide
Query:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST
        DR+KGPWSPEED+ LR LV +YG RNW+VI +SI GRSGKSCRLRW NQL P VE + F+AEEDE I  AHA+ GNKWATIARLLNGRTDNA+KNHWNST
Subjt:  DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNST

Query:  LK
        LK
Subjt:  LK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCCATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCTGT
TATCGGTCAGTCGATTCACGGACGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGG
TCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAG
CTGTTTGAGTCCATCGAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCGCCTCCGC
GACCGCAGCAGCAGAGTATTTCATCATTGCCGGAGGATCGGGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCCATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCTGT
TATCGGTCAGTCGATTCACGGACGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGG
TCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAG
CTGTTTGAGTCCATCGAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCGCCTCCGC
GACCGCAGCAGCAGAGTATTTCATCATTGCCGGAGGATCGGGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAA
Protein sequenceShow/hide protein sequence
MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK
LFESIEIGYERFDSESEQKAFDSSKPISSRNRIIASATAAAEYFIIAGGSGGESEIGALW