; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G005070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G005070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReticulon-like protein
Genome locationCmo_Chr04:2517550..2522523
RNA-Seq ExpressionCmoCh04G005070
SyntenyCmoCh04G005070
Gene Ontology termsGO:0009617 - response to bacterium (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003388 - Reticulon
IPR045064 - Reticulon-like protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600309.1 Reticulon-like protein B11, partial [Cucurbita argyrosperma subsp. sororia]7.7e-6297.69Show/hide
Query:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
        MSMGS STRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERA YNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
Subjt:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV

Query:  ADELRLWVNFALSIARDIAIGRNLKLFLQI
        ADELRLWVNFALSIARDIAIGRNLKLFLQ+
Subjt:  ADELRLWVNFALSIARDIAIGRNLKLFLQI

KAG7030968.1 Reticulon-like protein B11 [Cucurbita argyrosperma subsp. argyrosperma]7.7e-6297.69Show/hide
Query:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
        MSMGS STRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERA YNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
Subjt:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV

Query:  ADELRLWVNFALSIARDIAIGRNLKLFLQI
        ADELRLWVNFALSIARDIAIGRNLKLFLQ+
Subjt:  ADELRLWVNFALSIARDIAIGRNLKLFLQI

XP_022941946.1 reticulon-like protein B11 [Cucurbita moschata]3.1e-6399.23Show/hide
Query:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
        MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
Subjt:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV

Query:  ADELRLWVNFALSIARDIAIGRNLKLFLQI
        ADELRLWVNFALSIARDIAIGRNLKLFLQ+
Subjt:  ADELRLWVNFALSIARDIAIGRNLKLFLQI

XP_022982758.1 reticulon-like protein B11 [Cucurbita maxima]1.7e-6196.92Show/hide
Query:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
        MSMGS STRRISVHQ+LGGGPVADMLLWKKWCGGAVILTSTTALWYLFERA YNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
Subjt:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV

Query:  ADELRLWVNFALSIARDIAIGRNLKLFLQI
        ADELRLWVNFALSIARDIAIGRNLKLFLQ+
Subjt:  ADELRLWVNFALSIARDIAIGRNLKLFLQI

XP_023512950.1 reticulon-like protein B11 [Cucurbita pepo subsp. pepo]7.7e-6297.69Show/hide
Query:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
        MSMGS STRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERA YNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
Subjt:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV

Query:  ADELRLWVNFALSIARDIAIGRNLKLFLQI
        ADELRLWVNFALSIARDIAIGRNLKLFLQ+
Subjt:  ADELRLWVNFALSIARDIAIGRNLKLFLQI

TrEMBL top hitse value%identityAlignment
A0A1S3C273 Reticulon-like protein2.6e-5587.5Show/hide
Query:  MGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVAD
        +GS S+RRISVHQ LGGG VAD+LLWKKWCGG V+LTS TALWYLFERAGYNFLSFVANVLLLLV+ILF WAKSASLLNRPLPPLPDLEISEESVS+VA+
Subjt:  MGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVAD

Query:  ELRLWVNFALSIARDIAIGRNLKLFLQI
        ELR W+NFALSIARDIAIGRNLKLFLQ+
Subjt:  ELRLWVNFALSIARDIAIGRNLKLFLQI

A0A5D3CR52 Reticulon-like protein2.6e-5587.5Show/hide
Query:  MGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVAD
        +GS S+RRISVHQ LGGG VAD+LLWKKWCGG V+LTS TALWYLFERAGYNFLSFVANVLLLLV+ILF WAKSASLLNRPLPPLPDLEISEESVS+VA+
Subjt:  MGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVAD

Query:  ELRLWVNFALSIARDIAIGRNLKLFLQI
        ELR W+NFALSIARDIAIGRNLKLFLQ+
Subjt:  ELRLWVNFALSIARDIAIGRNLKLFLQI

A0A6J1D743 Reticulon-like protein1.2e-5586.92Show/hide
Query:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
        +SM S S+RRISVHQ LGGG VAD+LLW+KWCGGAVILTSTTALWYLFERAGYNFLSFVA+VLLLLV+ILF WAKSASLLNRPLPPLPDLEISEESVS+V
Subjt:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV

Query:  ADELRLWVNFALSIARDIAIGRNLKLFLQI
        A+ELR W+N+ALSIARDIAIGRNLKLFLQ+
Subjt:  ADELRLWVNFALSIARDIAIGRNLKLFLQI

A0A6J1FMI0 Reticulon-like protein1.5e-6399.23Show/hide
Query:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
        MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
Subjt:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV

Query:  ADELRLWVNFALSIARDIAIGRNLKLFLQI
        ADELRLWVNFALSIARDIAIGRNLKLFLQ+
Subjt:  ADELRLWVNFALSIARDIAIGRNLKLFLQI

A0A6J1J5P8 Reticulon-like protein8.3e-6296.92Show/hide
Query:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
        MSMGS STRRISVHQ+LGGGPVADMLLWKKWCGGAVILTSTTALWYLFERA YNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV
Subjt:  MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIV

Query:  ADELRLWVNFALSIARDIAIGRNLKLFLQI
        ADELRLWVNFALSIARDIAIGRNLKLFLQ+
Subjt:  ADELRLWVNFALSIARDIAIGRNLKLFLQI

SwissProt top hitse value%identityAlignment
O82352 Reticulon-like protein B57.0e-1839.34Show/hide
Query:  RRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWV
        R   VH+VLGGG  AD+ LW+       +L   TA+W LFE   Y+ LS + ++ +L +  LF+W+ + +L+N+  P +P++ + EE+  +VA  LR  +
Subjt:  RRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWV

Query:  NFALSIARDIAIGRNLKLFLQI
        N A  I R IA+GR+LK FL +
Subjt:  NFALSIARDIAIGRNLKLFLQI

Q6NPD8 Reticulon-like protein B107.3e-3154.62Show/hide
Query:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA
        SVHQ +  G VAD+++WK   GG ++L STT LW+LFE+ GY+F  FV N  LL V+ILF+WAKSA L NRP+P LP+LEI+EE V +VAD +R+W+N  
Subjt:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA

Query:  LSIARDIAIGRNLKLFLQI
        L++AR+I +GRN K   ++
Subjt:  LSIARDIAIGRNLKLFLQI

Q8GYH6 Reticulon-like protein B163.2e-1838.52Show/hide
Query:  RRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWV
        R+I+VHQ +GGG  AD+LLW++      ++  +T  W +FE +G  FLS  ++VLL++++I FV A+ ++  NR L  LP+L +SEE V+  A   R+ +
Subjt:  RRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWV

Query:  NFALSIARDIAIGRNLKLFLQI
        N  L +A D+ +G + +LF ++
Subjt:  NFALSIARDIAIGRNLKLFLQI

Q9LT71 Reticulon-like protein B115.2e-3760Show/hide
Query:  TSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELR
        +S+ R+SVHQ LG G VAD+LLW+   G  ++L S+T  W+LFERAGYN LSFV+NVLLLLV I F+WAKSA++LNRPLPP+P++EI EE  +  AD+LR
Subjt:  TSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELR

Query:  LWVNFALSIARDIAIGRNLKLFLQI
        +W+N+ LSIA DI I RN    LQ+
Subjt:  LWVNFALSIARDIAIGRNLKLFLQI

Q9M392 Reticulon-like protein B122.1e-2244.54Show/hide
Query:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA
        ++H++LGGG VAD++LW+K      I+T T A W +FE   Y   + +++VLLLL+ ILF+W+KSAS+LNRP PPLP+ +ISE      +  LR+ VN  
Subjt:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA

Query:  LSIARDIAIGRNLKLFLQI
        L ++ DIA+ R+ +L+ ++
Subjt:  LSIARDIAIGRNLKLFLQI

Arabidopsis top hitse value%identityAlignment
AT2G15280.1 Reticulon family protein5.2e-3254.62Show/hide
Query:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA
        SVHQ +  G VAD+++WK   GG ++L STT LW+LFE+ GY+F  FV N  LL V+ILF+WAKSA L NRP+P LP+LEI+EE V +VAD +R+W+N  
Subjt:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA

Query:  LSIARDIAIGRNLKLFLQI
        L++AR+I +GRN K   ++
Subjt:  LSIARDIAIGRNLKLFLQI

AT2G15280.2 Reticulon family protein6.7e-3257.02Show/hide
Query:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA
        SVHQ +  G VAD+++WK   GG ++L STT LW+LFE+ GY+F  FV N  LL V+ILF+WAKSA L NRP+P LP+LEI+EE V +VAD +R+W+N  
Subjt:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA

Query:  LSIARDIAIGRNLK
        L++AR+I +GRN K
Subjt:  LSIARDIAIGRNLK

AT3G19460.1 Reticulon family protein3.7e-3860Show/hide
Query:  TSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELR
        +S+ R+SVHQ LG G VAD+LLW+   G  ++L S+T  W+LFERAGYN LSFV+NVLLLLV I F+WAKSA++LNRPLPP+P++EI EE  +  AD+LR
Subjt:  TSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELR

Query:  LWVNFALSIARDIAIGRNLKLFLQI
        +W+N+ LSIA DI I RN    LQ+
Subjt:  LWVNFALSIARDIAIGRNLKLFLQI

AT3G19460.2 Reticulon family protein1.8e-3260.55Show/hide
Query:  VADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIG
        VAD+LLW+   G  ++L S+T  W+LFERAGYN LSFV+NVLLLLV I F+WAKSA++LNRPLPP+P++EI EE  +  AD+LR+W+N+ LSIA DI I 
Subjt:  VADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIG

Query:  RNLKLFLQI
        RN    LQ+
Subjt:  RNLKLFLQI

AT3G54120.1 Reticulon family protein1.5e-2344.54Show/hide
Query:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA
        ++H++LGGG VAD++LW+K      I+T T A W +FE   Y   + +++VLLLL+ ILF+W+KSAS+LNRP PPLP+ +ISE      +  LR+ VN  
Subjt:  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFA

Query:  LSIARDIAIGRNLKLFLQI
        L ++ DIA+ R+ +L+ ++
Subjt:  LSIARDIAIGRNLKLFLQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGGATCCACTTCTACTCGTCGCATTTCTGTTCATCAAGTGCTCGGCGGTGGTCCTGTCGCTGATATGCTCTTATGGAAGAAATGGTGTGGCGGGGCTGTCAT
ACTCACGTCTACAACAGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCCTCATTCTGTTCGTCTGGG
CCAAATCTGCTTCCCTTCTCAATAGACCTCTGCCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCGATAGTTGCTGATGAACTGCGATTGTGGGTCAATTTT
GCACTGTCAATTGCACGTGATATTGCAATAGGAAGAAACCTTAAGCTCTTTCTTCAGATCCAAAGGACGAACGGGGAAGGCAAAGAGCATGCAGTCATGCGTCTCTTAGG
GAGACCAACAACACTTTCTGGACAACAGTGCAGTGTGGGAATCAGGGCTTGGGTTGGTGTTGGTGTTGGTGTTGGTGGTGGGGTGGTCCTATAA
mRNA sequenceShow/hide mRNA sequence
TTGAAATTTTTGGGTGTTGGAATTCTCCGTTTTCCCCCCCTTCAGTTCTTAAATCTTCATCTTTCTCTCTGCTTTCAATTCTTGTTTTCTCTGAAACCCTAATCATGTCC
ATGGGATCCACTTCTACTCGTCGCATTTCTGTTCATCAAGTGCTCGGCGGTGGTCCTGTCGCTGATATGCTCTTATGGAAGAAATGGTGTGGCGGGGCTGTCATACTCAC
GTCTACAACAGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCCTCATTCTGTTCGTCTGGGCCAAAT
CTGCTTCCCTTCTCAATAGACCTCTGCCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCGATAGTTGCTGATGAACTGCGATTGTGGGTCAATTTTGCACTG
TCAATTGCACGTGATATTGCAATAGGAAGAAACCTTAAGCTCTTTCTTCAGATCCAAAGGACGAACGGGGAAGGCAAAGAGCATGCAGTCATGCGTCTCTTAGGGAGACC
AACAACACTTTCTGGACAACAGTGCAGTGTGGGAATCAGGGCTTGGGTTGGTGTTGGTGTTGGTGTTGGTGGTGGGGTGGTCCTATAA
Protein sequenceShow/hide protein sequence
MSMGSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNF
ALSIARDIAIGRNLKLFLQIQRTNGEGKEHAVMRLLGRPTTLSGQQCSVGIRAWVGVGVGVGGGVVL