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CmoCh04G005430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G005430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTubby-like F-box protein
Genome locationCmo_Chr04:2691552..2694458
RNA-Seq ExpressionCmoCh04G005430
SyntenyCmoCh04G005430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]2.7e-1379.63Show/hide
Query:  TTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
        + VAILC +LLS A  TVSADAADCIDGCFTACVQKD+R MQRCE KC IKCGP
Subjt:  TTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]7.0e-25100Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
KYP63130.1 Tubby-like F-box protein 8 [Cajanus cajan]4.1e-0957.38Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
        MKK  A    AI+  +++S+   +V  DA DCIDGC TACVQ+D+RL  RCEGKC+IKCGP
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]2.0e-1680.95Show/hide
Query:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        M+KS AA   AILC +LLSA A  TVSADAADCID CFTACVQKDTR+MQRCEGKCRIKCGPD
Subjt:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]1.6e-1369.44Show/hide
Query:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPD
        M+KS AA   AILC +LLSA A  TVSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPD
Subjt:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPD
TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein2.7e-1480Show/hide
Query:  TTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        + VAILC +LLS A  TVSADAADCIDGCFTACVQKD+R MQRCE KC IKCGPD
Subjt:  TTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
A0A151T7U7 Tubby-like F-box protein2.0e-0957.38Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
        MKK  A    AI+  +++S+   +V  DA DCIDGC TACVQ+D+RL  RCEGKC+IKCGP
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X29.8e-1780.95Show/hide
Query:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        M+KS AA   AILC +LLSA A  TVSADAADCID CFTACVQKDTR+MQRCEGKCRIKCGPD
Subjt:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X17.8e-1469.44Show/hide
Query:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPD
        M+KS AA   AILC +LLSA A  TVSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPD
Subjt:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPD
A0A6A4NXS4 Uncharacterized protein2.6e-0954.84Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        MK       + +L F++ S    TV++DA+DC+D C TACVQ+DTRLMQRC+ KC+IKCGPD
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25275.1 unknown protein1.4e-0745.45Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        MKK    T VA L  ++   ++  + A+A     DC DGC TACVQ+D R   RC+ KC I+CGPD
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
AT1G25275.2 unknown protein5.3e-0743.94Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        MKK    T VA L  ++   ++  + A+A     DC DGC TACVQ+D     RC+ KC I+CGPD
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
AT1G25275.3 unknown protein7.0e-0744.62Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
        MKK    T VA L  ++   ++  + A+A     DC DGC TACVQ+D R   RC+ KC I+CGP
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATCTACGGCGGCGACGACGGTGGCGATTCTGTGCTTCATCCTACTCTCTGCGGCAGCGACGACGGTTTCAGCCGACGCCGCAGACTGCATCGACGGCTGCTT
CACCGCCTGTGTCCAGAAAGACACGAGACTGATGCAGCGTTGTGAGGGCAAGTGCAGGATTAAATGCGGTCCAGATCTTTCATTGTTTGTTCTTAGTTCAAAGTGTTTGA
TCTGA
mRNA sequenceShow/hide mRNA sequence
CACTAGTTTTTTCCCCCAAATTAAATTTTATTTATTAATTTTTTTGCCACGTGGCCATTATTTAGCTTGGGACTCCGATAACTTCATTGATAACCATCATTTCTAGTATC
GTATGCTCAGAAACAAACGAACCGAAAGATAAGATCTGAAACGGGAGCGGCGATGAAGAAATCTACGGCGGCGACGACGGTGGCGATTCTGTGCTTCATCCTACTCTCTG
CGGCAGCGACGACGGTTTCAGCCGACGCCGCAGACTGCATCGACGGCTGCTTCACCGCCTGTGTCCAGAAAGACACGAGACTGATGCAGCGTTGTGAGGGCAAGTGCAGG
ATTAAATGCGGTCCAGATCTTTCATTGTTTGTTCTTAGTTCAAAGTGTTTGATCTGA
Protein sequenceShow/hide protein sequence
MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDLSLFVLSSKCLI