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CmoCh04G005470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G005470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWRKY domain-containing protein
Genome locationCmo_Chr04:2702157..2702957
RNA-Seq ExpressionCmoCh04G005470
SyntenyCmoCh04G005470
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR044810 - WRKY transcription factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149157.1 probable WRKY transcription factor 9 [Momordica charantia]1.2e-2463.36Show/hide
Query:  MEIDLSLKIDHHK--------QEPNQEHQEHDEHEEHEEHE---DYRVREK---KGVDDTEIH--VAASTLKVFLPQHNVNVGEISELQMEMNRMKEENK
        MEIDLSLKIDHHK        Q+ ++E +E +E EE EE E   D  + EK   + V + + H  +AAS+LKVFLP HN+N GEISELQ EMNRMKEENK
Subjt:  MEIDLSLKIDHHK--------QEPNQEHQEHDEHEEHEEHE---DYRVREK---KGVDDTEIH--VAASTLKVFLPQHNVNVGEISELQMEMNRMKEENK

Query:  MLRKEVEQTMKDYYDLEMKIAIIQQNNLQKK
        +LRK VEQTMKDYYDLEMKIA+IQQNNL KK
Subjt:  MLRKEVEQTMKDYYDLEMKIAIIQQNNLQKK

XP_022942007.1 probable WRKY transcription factor 9 [Cucurbita moschata]4.0e-52100Show/hide
Query:  MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL
        MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL
Subjt:  MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL

Query:  EMKIAIIQQNNLQKK
        EMKIAIIQQNNLQKK
Subjt:  EMKIAIIQQNNLQKK

XP_022980576.1 probable WRKY transcription factor 9 [Cucurbita maxima]2.5e-4692.37Show/hide
Query:  MEIDLSLKIDHHKQEPNQEHQEH---DEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDY
        MEIDLSLKIDHHKQE NQEHQEH   DE +EH+EHEDYRV EKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEM+RMKEENKMLRKEVEQTMKDY
Subjt:  MEIDLSLKIDHHKQEPNQEHQEH---DEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDY

Query:  YDLEMKIAIIQQNNLQKK
        YDLEMKIAIIQQNNLQKK
Subjt:  YDLEMKIAIIQQNNLQKK

XP_023543016.1 probable WRKY transcription factor 9 [Cucurbita pepo subsp. pepo]2.9e-5098.26Show/hide
Query:  MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL
        MEIDLSLKIDHHKQEPNQEHQE DEHEEHEEHE YRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL
Subjt:  MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL

Query:  EMKIAIIQQNNLQKK
        EMKIAIIQQNNLQKK
Subjt:  EMKIAIIQQNNLQKK

XP_038906408.1 probable WRKY transcription factor 9 [Benincasa hispida]3.9e-2364.86Show/hide
Query:  MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL
        MEIDLSLKIDHHK+E  +  +  +E EE EE E+    E++ +DD  +   +S LK+FLP HN+N+GEISELQMEM+RMKEENK+LRK VEQTMKDYYDL
Subjt:  MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL

Query:  EMKIAIIQQNN
        EMKI  IQQNN
Subjt:  EMKIAIIQQNN

TrEMBL top hitse value%identityAlignment
A0A0A0LC02 WRKY domain-containing protein3.6e-2259.68Show/hide
Query:  MEIDLSLKIDHHKQE----------PNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAAST---LKVFLPQHNVNVGEISELQMEMNRMKEENKMLR
        MEIDLSLKIDHHK+E           N + Q  D+H+  EE E     E++   D + HV  ST   LKVFLP +N NVGEISELQMEM+R+KEENK LR
Subjt:  MEIDLSLKIDHHKQE----------PNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAAST---LKVFLPQHNVNVGEISELQMEMNRMKEENKMLR

Query:  KEVEQTMKDYYDLEMKIAIIQQNN
        K VEQTMKDYYDLEMKI   QQNN
Subjt:  KEVEQTMKDYYDLEMKIAIIQQNN

A0A1S3C2F5 probable WRKY transcription factor 99.4e-2357.72Show/hide
Query:  MEIDLSLKIDHHKQE------------PNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRK
        MEIDLSLKIDHHK+E              Q+HQ+  +H++ EE ED    E+  +D   +    S LKV LP +N+NVGEISELQMEM+R+KEENK LRK
Subjt:  MEIDLSLKIDHHKQE------------PNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRK

Query:  EVEQTMKDYYDLEMKIAIIQQNN
         VEQTMKDYYDLEMKI   QQNN
Subjt:  EVEQTMKDYYDLEMKIAIIQQNN

A0A6J1D728 probable WRKY transcription factor 95.9e-2563.36Show/hide
Query:  MEIDLSLKIDHHK--------QEPNQEHQEHDEHEEHEEHE---DYRVREK---KGVDDTEIH--VAASTLKVFLPQHNVNVGEISELQMEMNRMKEENK
        MEIDLSLKIDHHK        Q+ ++E +E +E EE EE E   D  + EK   + V + + H  +AAS+LKVFLP HN+N GEISELQ EMNRMKEENK
Subjt:  MEIDLSLKIDHHK--------QEPNQEHQEHDEHEEHEEHE---DYRVREK---KGVDDTEIH--VAASTLKVFLPQHNVNVGEISELQMEMNRMKEENK

Query:  MLRKEVEQTMKDYYDLEMKIAIIQQNNLQKK
        +LRK VEQTMKDYYDLEMKIA+IQQNNL KK
Subjt:  MLRKEVEQTMKDYYDLEMKIAIIQQNNLQKK

A0A6J1FP18 probable WRKY transcription factor 91.9e-52100Show/hide
Query:  MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL
        MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL
Subjt:  MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDL

Query:  EMKIAIIQQNNLQKK
        EMKIAIIQQNNLQKK
Subjt:  EMKIAIIQQNNLQKK

A0A6J1ITZ0 probable WRKY transcription factor 91.2e-4692.37Show/hide
Query:  MEIDLSLKIDHHKQEPNQEHQEH---DEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDY
        MEIDLSLKIDHHKQE NQEHQEH   DE +EH+EHEDYRV EKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEM+RMKEENKMLRKEVEQTMKDY
Subjt:  MEIDLSLKIDHHKQEPNQEHQEH---DEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDY

Query:  YDLEMKIAIIQQNNLQKK
        YDLEMKIAIIQQNNLQKK
Subjt:  YDLEMKIAIIQQNNLQKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68150.1 WRKY DNA-binding protein 92.5e-0436.36Show/hide
Query:  MEIDLSLKIDHHKQEPNQEHQEHD-EHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYD
        M IDLSLK++  +++   E  +H  E++E EEH+     +++ V + E    +S+L +   +      E+ +LQ++M  +KEEN  LRK VEQT++DY  
Subjt:  MEIDLSLKIDHHKQEPNQEHQEHD-EHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYD

Query:  LEMKIAIIQQ
        LEMK  +I +
Subjt:  LEMKIAIIQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGATCTATCACTCAAAATTGATCATCACAAACAAGAACCGAACCAAGAACATCAAGAACACGACGAACACGAAGAACACGAAGAACACGAAGATTATCGAGT
TCGAGAAAAAAAGGGAGTTGATGACACTGAAATTCATGTTGCTGCCTCTACTTTGAAAGTATTTTTGCCACAACACAACGTTAATGTAGGAGAGATCTCGGAGTTGCAAA
TGGAGATGAATCGTATGAAGGAAGAGAACAAGATGTTGAGAAAAGAAGTGGAACAAACCATGAAAGATTACTATGATCTTGAGATGAAAATTGCTATCATTCAACAAAAC
AATCTCCAAAAAAAGGTACCCAAAACCCCAATTCTCGTGTTTTTCAATATCAATATGAGTTTGATACTCGTAACGATTCTATCCGTGAGAATTCGAGCTATGATTTGTTT
CTCGGTTGAATCCATACACAGGACTCTCACAACTTTCTACCGAGCCACGAAAATGAAAACAAGAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGATCTATCACTCAAAATTGATCATCACAAACAAGAACCGAACCAAGAACATCAAGAACACGACGAACACGAAGAACACGAAGAACACGAAGATTATCGAGT
TCGAGAAAAAAAGGGAGTTGATGACACTGAAATTCATGTTGCTGCCTCTACTTTGAAAGTATTTTTGCCACAACACAACGTTAATGTAGGAGAGATCTCGGAGTTGCAAA
TGGAGATGAATCGTATGAAGGAAGAGAACAAGATGTTGAGAAAAGAAGTGGAACAAACCATGAAAGATTACTATGATCTTGAGATGAAAATTGCTATCATTCAACAAAAC
AATCTCCAAAAAAAGGTACCCAAAACCCCAATTCTCGTGTTTTTCAATATCAATATGAGTTTGATACTCGTAACGATTCTATCCGTGAGAATTCGAGCTATGATTTGTTT
CTCGGTTGAATCCATACACAGGACTCTCACAACTTTCTACCGAGCCACGAAAATGAAAACAAGAGGATAG
Protein sequenceShow/hide protein sequence
MEIDLSLKIDHHKQEPNQEHQEHDEHEEHEEHEDYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDLEMKIAIIQQN
NLQKKVPKTPILVFFNINMSLILVTILSVRIRAMICFSVESIHRTLTTFYRATKMKTRG