CuGenDBv2

Gene ID	CmoCh04G005570
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Maternal effect embryo arrest 9
Genome location	Cmo_Chr04:2751848..2752291
RNA-Seq Expression	CmoCh04G005570
Synteny	CmoCh04G005570
Gene Ontology terms	GO:0009555 - pollen development (biological process) GO:0009793 - embryo development ending in seed dormancy (biological process) GO:0015074 - DNA integration (biological process) GO:0009506 - plasmodesma (cellular component) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600354.1 hypothetical protein SDJN03_05587, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-68

97.96

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQDL+DKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

KAG7031013.1 hypothetical protein SDJN02_05052, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.5e-68

97.28

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQDL+DKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARK+GSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

XP_022942791.1 uncharacterized protein LOC111447720 [Cucurbita moschata]

1.8e-69

100

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

XP_022982937.1 uncharacterized protein LOC111481629 isoform X1 [Cucurbita maxima]

5.9e-68

97.28

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM QAEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQDL+DKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

XP_023533822.1 uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo]

5.9e-68

97.28

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAA+ELQHQNE RDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDL+DKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMG LMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAB6 Uncharacterized protein

1.7e-65

93.88

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ L+DKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAA+VASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

A0A6J1E4Z9 uncharacterized protein LOC111430656

1.2e-63

92.52

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSD+AL+DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAMQ+AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

A0A6J1FR93 uncharacterized protein LOC111447720

8.9e-70

100

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

A0A6J1IXX5 uncharacterized protein LOC111481629 isoform X1

2.9e-68

97.28

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM QAEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQDL+DKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

A0A6J1JCA1 uncharacterized protein LOC111483158

2.1e-63

91.84

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Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAE ELQ+L+DKSE
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAA+ASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G60870.1 maternal effect embryo arrest 9

2.1e-39

59.86

Show/hide

Query:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE
        MEALI  FT LSD+AL DK FDPS IEDLM+LFE+++Y +WAALE + Q E  +AE ++++AE  LD  ME  M+E+RR  EE +RM  AEL++L +K+E
Subjt:  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
         AR+ G+LMEKAA VA+KR++ AAM SA ASMRSAWK  + NKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

Sequences

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CDS sequence

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ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGC
CTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTA
TGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCATCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAG
AAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTC
TTGA

mRNA sequence

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Protein sequence

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MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLME
KAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

CmoCh04G005570 (gene) of Cucurbita moschata (Rifu) v1 genome