; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G005590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G005590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:2753578..2756228
RNA-Seq ExpressionCmoCh04G005590
SyntenyCmoCh04G005590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8083453.1 hypothetical protein EE612_005646 [Oryza sativa]1.2e-1349.56Show/hide
Query:  SLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAP
        S S I  P  S  +DPAAP   AS++  TS+PA  A T PS SP     IAIW      CP P  P Y+ FP + NRG    TT ASPP KM +    AP
Subjt:  SLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAP

Query:  MSPPDTGASTAQQ
         SPP+TGASTA Q
Subjt:  MSPPDTGASTAQQ

KEY85268.1 hypothetical protein PC358_22510 [Pseudomonas capeferrum]5.3e-0635.16Show/hide
Query:  GLKSLSIILPPNNSIAIDPPAPPLTASTNCFTSNPACSANTSPSLTPIMFPTSVIWFAILQLCPHPASPTYVT-FPNASNRGDNHFTTSASPPPKMDSFP
        G K LS I         +   PP  AS     S P CSAN + S        ++IW   L   P P +P  VT +P A + G     ++ASPP  M   P
Subjt:  GLKSLSIILPPNNSIAIDPPAPPLTASTNCFTSNPACSANTSPSLTPIMFPTSVIWFAILQLCPHPASPTYVT-FPNASNRGDNHFTTSASPPPKMDSFP

Query:  SLAPMSPPDTGASTAQQPAKNINCEGVS
        + AP  PPDTGAS+   P K  +   +S
Subjt:  SLAPMSPPDTGASTAQQPAKNINCEGVS

KWT61598.1 hypothetical protein ADL21_12920 [Streptomyces albus subsp. albus]3.1e-0636.97Show/hide
Query:  PGLKSLSIILPPNNSIAIDPPAPPLTASTNCFTSNPACSANTSPSLTPIMFPTSVIWFAILQLCPHPASP-TYVTFPNASNRGDNHFTTSASPPPKMDSF
        PG KS S  L    +  ++P +PP   S+    S P  S  T+ S        ++ W A L +CP P  P   +  P AS RG     +S +PP  MDS 
Subjt:  PGLKSLSIILPPNNSIAIDPPAPPLTASTNCFTSNPACSANTSPSLTPIMFPTSVIWFAILQLCPHPASP-TYVTFPNASNRGDNHFTTSASPPPKMDSF

Query:  PSLAPMSPPDTGASTAQQP
         S+AP SPP+TGAS+ + P
Subjt:  PSLAPMSPPDTGASTAQQP

RMS66728.1 hypothetical protein ALP65_04559 [Pseudomonas aeruginosa]2.2e-0437.9Show/hide
Query:  RSFTIYSAYPPGLKSLSIILPPNNSIAIDPPAPPLTASTNCFTSNPACSANTSPSLTPIMFPTSVIWFAILQLCPHPASPTYVTF-PNASNRGDNHFTTS
        RSF       PG K    +  P  S   +   PP++AS     S P  +AN+  S T  MF  ++IW A L + P P  PT V F P A N G       
Subjt:  RSFTIYSAYPPGLKSLSIILPPNNSIAIDPPAPPLTASTNCFTSNPACSANTSPSLTPIMFPTSVIWFAILQLCPHPASPTYVTF-PNASNRGDNHFTTS

Query:  ASPPPKMDSFPSLAPMSPPDTGAS
          PP  M    +LAP SPP+TGAS
Subjt:  ASPPPKMDSFPSLAPMSPPDTGAS

XP_034437247.1 extensin-like, partial [Hippoglossus hippoglossus]2.2e-0427.69Show/hide
Query:  TSSPSSTTSTHIARSFTIYSAYPPGLKSLS-IILPPNNSIAIDPPAPPLTASTNCFTSNPACSANTSPSLTPIMFPTSVIWFAILQLCPHPASPTYVTFP
        TSSP+S+ ++    S T    +PP     S    PP +S    P +PP  + T+  TS P  S  +SP+  P   PTS            PA+    + P
Subjt:  TSSPSSTTSTHIARSFTIYSAYPPGLKSLS-IILPPNNSIAIDPPAPPLTASTNCFTSNPACSANTSPSLTPIMFPTSVIWFAILQLCPHPASPTYVTFP

Query:  NASNRGDNHFTTSASPPPKMDSFPSLAPMSPPDTG--ASTAQQPAKNINCEGVSGGEETSGHGGAHHTYADPSNAKNNCLASAAPGNTTSLSTSSPSSTT
         +S       + ++SP     S P+ +P SPP +   +S    P  +      S    +          + P+++  +   S+   + TS  TSSP+S+ 
Subjt:  NASNRGDNHFTTSASPPPKMDSFPSLAPMSPPDTG--ASTAQQPAKNINCEGVSGGEETSGHGGAHHTYADPSNAKNNCLASAAPGNTTSLSTSSPSSTT

Query:  STPIPKSFTIYSANPPGLKSLSIILS-PNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYA-TFPNASNRGD
        ++P   S T    +PP     S   S P SS    P++PP  + T+  TS P  S  +SP+  P   P  +         P  +SPT + TFP   +   
Subjt:  STPIPKSFTIYSANPPGLKSLSIILS-PNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYA-TFPNASNRGD

Query:  NHFTTPASPPPKMANFPSLAPMSPP
           T+PA+ PP   + P+ +P SPP
Subjt:  NHFTTPASPPPKMANFPSLAPMSPP

TrEMBL top hitse value%identityAlignment
A0A0A9EWT7 Uncharacterized protein2.2e-2148.08Show/hide
Query:  AKNNCLASAAPGNTTSLSTSSPSSTTSTPIPKSFTIYSANPPGLKSLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFA
        A+N C  SAAPG+T +   SSP S TS+  P+S T+Y   PP   S     SP  SI  +PAAP   A      S+PA +AN + SP P   P  AIW A
Subjt:  AKNNCLASAAPGNTTSLSTSSPSSTTSTPIPKSFTIYSANPPGLKSLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFA

Query:  ILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAPMSPPDTGASTA
        IL LCP P  P +  FP  +  G +  TT +SPP KMA  PS AP SPP+TGASTA
Subjt:  ILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAPMSPPDTGASTA

A0A0A9GSN2 Uncharacterized protein1.0e-2350Show/hide
Query:  AKNNCLASAAPGNTTSLSTSSPSSTTSTPIPKSFTIYSANPPGLKSLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFA
        A+N C  SAAPG+T +   SSP S TS+ +P+S T+Y   PP   S     SP  SI  DPAAP   AS N   S+PA  AN + SP P   P  AIW A
Subjt:  AKNNCLASAAPGNTTSLSTSSPSSTTSTPIPKSFTIYSANPPGLKSLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFA

Query:  ILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAPMSPPDTGASTA
        IL LCP P  P +  FP  +  G +  TT +SPP KMA  PS AP SPP+TGASTA
Subjt:  ILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAPMSPPDTGASTA

A0A0A9IU47 Uncharacterized protein7.6e-1948.82Show/hide
Query:  IPKSFTIYSANPPGLKSLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYATFPNASNRGDNHFTT
        +P+S T+Y   PP   S     SP  SI  +PAAP   AS N   S+PA  AN + SP P   P  AIW AIL LCP P  P +  FP  +  G +  TT
Subjt:  IPKSFTIYSANPPGLKSLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYATFPNASNRGDNHFTT

Query:  PASPPPKMANFPSLAPMSPPDTGASTA
         +SPP KMA  PS AP SPP+TGASTA
Subjt:  PASPPPKMANFPSLAPMSPPDTGASTA

A0A0P0V844 Os01g0742350 protein5.7e-1449.56Show/hide
Query:  SLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAP
        S S I  P  S  +DPAAP   AS++  TS+PA  A T PS SP     IAIW      CP P  P Y+ FP + NRG    TT ASPP KM +    AP
Subjt:  SLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAP

Query:  MSPPDTGASTAQQ
         SPP+TGASTA Q
Subjt:  MSPPDTGASTAQQ

C7IY07 Os01g0742350 protein5.7e-1449.56Show/hide
Query:  SLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAP
        S S I  P  S  +DPAAP   AS++  TS+PA  A T PS SP     IAIW      CP P  P Y+ FP + NRG    TT ASPP KM +    AP
Subjt:  SLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAP

Query:  MSPPDTGASTAQQ
         SPP+TGASTA Q
Subjt:  MSPPDTGASTAQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCAGCCCCTGGCAGCACTGCAATCCTCTCCACATCTTCCCCTTCTTCCACAACGTCCACACACATTGCCAGATCCTTCACCATATACTCAGCATACCCACC
AGGCCTGAAGTCCCTCTCTATCATCCTCCCCCCGAACAACTCCATTGCCATCGACCCTCCTGCCCCGCCCCTCACAGCTTCCACAAACTGCTTCACATCCAACCCCGCCT
GCTCAGCGAACACCAGCCCTTCACTCACCCCTATCATGTTTCCCACAAGCGTTATCTGGTTCGCTATCTTGCAGCTCTGCCCACACCCTGCTTCACCCACGTATGTCACT
TTCCCCAATGCTTCAAACAGAGGTGATAACCACTTCACTACCTCTGCATCGCCACCCCCAAAAATGGATAGCTTCCCGTCCCTAGCGCCAATGTCGCCTCCTGACACGGG
CGCATCCACAGCCCAGCAACCTGCCAAGAATATTAATTGTGAGGGAGTATCCGGCGGCGAGGAGACGAGTGGCCATGGCGGCGCCCATCACACCTATGCCGATCCATCCA
ACGCGAAGAACAATTGCTTGGCCAGTGCAGCCCCTGGCAACACTACAAGCCTCTCCACATCTTCCCCTTCTTCCACAACATCCACGCCCATTCCCAAATCCTTCACCATA
TACTCAGCAAACCCACCAGGCCTAAAGTCCCTCTCTATCATCCTCTCACCAAACAGCTCCATTGCCATTGACCCTGCAGCCCCACCCCTTAAAGCTTCCACAAACTGCTT
CACATCCAACCCCGCCCGCTCAGCGAACACCAGCCCTTCACCCAGCCCCATCAGGTTTCCCCCAATCGCTATCTGGTTCGCTATCTTGCAGCTCTGTCCACACCCTGCTT
CACCCACGTATGCCACTTTCCCCAATGCTTCAAACAGAGGTGACAACCACTTCACTACCCCTGCATCACCACCCCCAAAAATGGCCAACTTCCCATCTCTAGCGCCAATG
TCGCCCCCTGACACGGGCGCATCCACAGCCCAGCAACCTGCCAAGAATATGAGCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCAGCCCCTGGCAGCACTGCAATCCTCTCCACATCTTCCCCTTCTTCCACAACGTCCACACACATTGCCAGATCCTTCACCATATACTCAGCATACCCACC
AGGCCTGAAGTCCCTCTCTATCATCCTCCCCCCGAACAACTCCATTGCCATCGACCCTCCTGCCCCGCCCCTCACAGCTTCCACAAACTGCTTCACATCCAACCCCGCCT
GCTCAGCGAACACCAGCCCTTCACTCACCCCTATCATGTTTCCCACAAGCGTTATCTGGTTCGCTATCTTGCAGCTCTGCCCACACCCTGCTTCACCCACGTATGTCACT
TTCCCCAATGCTTCAAACAGAGGTGATAACCACTTCACTACCTCTGCATCGCCACCCCCAAAAATGGATAGCTTCCCGTCCCTAGCGCCAATGTCGCCTCCTGACACGGG
CGCATCCACAGCCCAGCAACCTGCCAAGAATATTAATTGTGAGGGAGTATCCGGCGGCGAGGAGACGAGTGGCCATGGCGGCGCCCATCACACCTATGCCGATCCATCCA
ACGCGAAGAACAATTGCTTGGCCAGTGCAGCCCCTGGCAACACTACAAGCCTCTCCACATCTTCCCCTTCTTCCACAACATCCACGCCCATTCCCAAATCCTTCACCATA
TACTCAGCAAACCCACCAGGCCTAAAGTCCCTCTCTATCATCCTCTCACCAAACAGCTCCATTGCCATTGACCCTGCAGCCCCACCCCTTAAAGCTTCCACAAACTGCTT
CACATCCAACCCCGCCCGCTCAGCGAACACCAGCCCTTCACCCAGCCCCATCAGGTTTCCCCCAATCGCTATCTGGTTCGCTATCTTGCAGCTCTGTCCACACCCTGCTT
CACCCACGTATGCCACTTTCCCCAATGCTTCAAACAGAGGTGACAACCACTTCACTACCCCTGCATCACCACCCCCAAAAATGGCCAACTTCCCATCTCTAGCGCCAATG
TCGCCCCCTGACACGGGCGCATCCACAGCCCAGCAACCTGCCAAGAATATGAGCAAATAA
Protein sequenceShow/hide protein sequence
MANAAPGSTAILSTSSPSSTTSTHIARSFTIYSAYPPGLKSLSIILPPNNSIAIDPPAPPLTASTNCFTSNPACSANTSPSLTPIMFPTSVIWFAILQLCPHPASPTYVT
FPNASNRGDNHFTTSASPPPKMDSFPSLAPMSPPDTGASTAQQPAKNINCEGVSGGEETSGHGGAHHTYADPSNAKNNCLASAAPGNTTSLSTSSPSSTTSTPIPKSFTI
YSANPPGLKSLSIILSPNSSIAIDPAAPPLKASTNCFTSNPARSANTSPSPSPIRFPPIAIWFAILQLCPHPASPTYATFPNASNRGDNHFTTPASPPPKMANFPSLAPM
SPPDTGASTAQQPAKNMSK