CuGenDBv2

Gene ID	CmoCh04G005810
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Transmembrane protein
Genome location	Cmo_Chr04:2902092..2902526
RNA-Seq Expression	CmoCh04G005810
Synteny	CmoCh04G005810
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008456033.1 PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]

1.2e-73

96.53

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Query:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
        MASSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMA
Subjt:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

XP_022941561.1 uncharacterized protein LOC111446881 [Cucurbita moschata]

5.8e-76

100

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Query:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
        MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
Subjt:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

XP_022983116.1 uncharacterized protein LOC111481757 [Cucurbita maxima]

6.4e-75

98.61

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Query:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
        MASS FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMV+FVKDRDFQSFFAKGCVLLHLAMA
Subjt:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

XP_022984157.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima]

2.3e-72

95.1

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Query:  ASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAI
        +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMAI
Subjt:  ASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

XP_038875201.1 uncharacterized protein LOC120067716 [Benincasa hispida]

1.2e-73

97.22

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Query:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
        MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMA
Subjt:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLA DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C293 uncharacterized protein LOC103496084

5.9e-74

96.53

Show/hide

Query:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
        MASSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMA
Subjt:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

A0A6J1E545 uncharacterized protein LOC111430823 isoform X2

9.3e-72

94.41

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Query:  ASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAI
        +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS  DQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMAI
Subjt:  ASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

A0A6J1FMS5 uncharacterized protein LOC111446881

2.8e-76

100

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Query:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
        MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
Subjt:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

A0A6J1J176 uncharacterized protein LOC111481757

3.1e-75

98.61

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Query:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
        MASS FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMV+FVKDRDFQSFFAKGCVLLHLAMA
Subjt:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

A0A6J1J9R2 uncharacterized protein LOC111482570 isoform X2

1.1e-72

95.1

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Query:  ASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAI
        +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMAI
Subjt:  ASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G53035.1 unknown protein

3.4e-50

63.19

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Query:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
        M  S F +IC+LHS+IALT G LMMFY+ +  +FG G E A KL+GS+P D+LLI+ S SFSGLLLF +G +LFMV+FVKD++F SFFA G V+L++ MA
Subjt:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        +WRV FE K+EDLA +WP+Q +GD+ LA+SWVFFL+YSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

AT3G15358.1 unknown protein

8.4e-49

61.81

Show/hide

Query:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA
        M S  F +IC+LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+P D+ LI+ S SFSGLLLF +G +LFMV+FVKDR+F SFFA G V+L++ MA
Subjt:  MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        +WRV FE K+EDLA + P+Q +GD+ LA+SWVFFL+Y+WREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCATCATCTGGGTTTTTGTTAATTTGTATGCTTCATTCTCTGATTGCTTTAACATGTGGAGCCTTAATGATGTTTTATTCCCACGAGGTCTATGTGTTTGGCCATGG
CCCTGAGACTGCAATCAAGCTGCAGGGATCTAGCCCTCGTGATCAGCTTCTGATAAAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTAT
TCATGGTGGCTTTTGTCAAAGACAGAGACTTCCAAAGCTTCTTTGCTAAAGGGTGCGTGTTGCTTCACTTAGCTATGGCCATATGGAGAGTTTACTTCGAGAGGAAGCTC
GAAGATCTTGCTAAAGATTGGCCTCGACAGGTCGTTGGGGATGTCACATTGGCATTGTCATGGGTTTTCTTTCTTATGTATTCATGGAGAGAAAAGTATGATTAA

mRNA sequence

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Protein sequence

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MASSGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAIWRVYFERKL
EDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

CmoCh04G005810 (gene) of Cucurbita moschata (Rifu) v1 genome