; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G006000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G006000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHomogentisate 1,2-dioxygenase
Genome locationCmo_Chr04:2993659..2994253
RNA-Seq ExpressionCmoCh04G006000
SyntenyCmoCh04G006000
Gene Ontology termsGO:0006559 - L-phenylalanine catabolic process (biological process)
GO:0006570 - tyrosine metabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004411 - homogentisate 1,2-dioxygenase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0043022 - ribosome binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005708 - Homogentisate 1,2-dioxygenase
IPR011051 - RmlC-like cupin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600393.1 Homogentisate 1,2-dioxygenase, partial [Cucurbita argyrosperma subsp. sororia]9.7e-4091.01Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
        +G    +  ATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV

KAG7031055.1 Homogentisate 1,2-dioxygenase, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-4091.01Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
        +G    +  ATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV

XP_022942212.1 homogentisate 1,2-dioxygenase [Cucurbita moschata]9.7e-4091.01Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
        +G    +  ATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV

XP_022980282.1 homogentisate 1,2-dioxygenase [Cucurbita maxima]2.8e-3989.89Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
        +G    +  ATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDP+KVKTDVENGRQTV
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV

XP_023550715.1 homogentisate 1,2-dioxygenase [Cucurbita pepo subsp. pepo]9.7e-4091.01Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
        +G    +  ATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV

TrEMBL top hitse value%identityAlignment
A0A5A7UWB4 Homogentisate 1,2-dioxygenase1.0e-2671.26Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQ
        +G    +  ATIARGN+AGP++I+ TMAFMFESSLIPRVCSWALESP MDHDYYQCWIGLKSHF +E    D DPQKV+   ENGRQ
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQ

A0A5D3D7P2 Homogentisate 1,2-dioxygenase1.0e-2671.26Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQ
        +G    +  ATIARGN+AGP++I+ TMAFMFESSLIPRVCSWALESP MDHDYYQCWIGLKSHF +E    D DPQKV+   ENGRQ
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQ

A0A6J1CNH2 Homogentisate 1,2-dioxygenase1.7e-2975.86Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQ
        +G    +  ATIARGNEAGPYRITDTMAFMFESSLIPRVC+WALESP MD DYY+CWIGLKSHFT++  TRD DP+KVKT+  NGRQ
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQ

A0A6J1FPL5 Homogentisate 1,2-dioxygenase4.7e-4091.01Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
        +G    +  ATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV

A0A6J1IQY7 Homogentisate 1,2-dioxygenase1.4e-3989.89Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV
        +G    +  ATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDP+KVKTDVENGRQTV
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV

SwissProt top hitse value%identityAlignment
O09173 Homogentisate 1,2-dioxygenase1.0e-0758.33Show/hide
Query:  PYRITD-TMAFMFESSLIPRVCSWALES-PCMDHDYYQCWIGLKSHFT
        P RI D TMAFMFESSL   V  W L++  C+D +YY+CW  L+SHFT
Subjt:  PYRITD-TMAFMFESSLIPRVCSWALES-PCMDHDYYQCWIGLKSHFT

Q0K0L8 Homogentisate 1,2-dioxygenase7.8e-0843.08Show/hide
Query:  SSHSSNSATIARGNEAG---PYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHF
        S H  ++ T  + + A    P+RI DTMAFMFE+  + R   +A +S  +  DYY CW GLK HF
Subjt:  SSHSSNSATIARGNEAG---PYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHF

Q46UA4 Homogentisate 1,2-dioxygenase3.5e-0844.62Show/hide
Query:  SSHSSNSATIARGNEAG---PYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHF
        S H  ++ T A+   A    P+ ITDTMAFMFE+  + R   +A  S  +  DYY CW GLK HF
Subjt:  SSHSSNSATIARGNEAG---PYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHF

Q5VRH4 Homogentisate 1,2-dioxygenase1.2e-1658.21Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSE
        +G    +  ATI+R +   P R++ T+AFMFES+LIPRVC WAL+SP  D DYYQCWIGLKSHF+ +
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFTSE

Q9ZRA2 Homogentisate 1,2-dioxygenase5.2e-2067.69Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFT
        +G   ++  ATIAR N   P ++T TMAFMFES+LIPRVC WALESP +DHDYYQCWIGLKSHF+
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFT

Arabidopsis top hitse value%identityAlignment
AT5G54080.1 homogentisate 1,2-dioxygenase3.7e-2167.69Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFT
        +G   ++  ATIAR N   P ++T TMAFMFES+LIPRVC WALESP +DHDYYQCWIGLKSHF+
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFT

AT5G54080.2 homogentisate 1,2-dioxygenase3.7e-2167.69Show/hide
Query:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFT
        +G   ++  ATIAR N   P ++T TMAFMFES+LIPRVC WALESP +DHDYYQCWIGLKSHF+
Subjt:  NGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRVCSWALESPCMDHDYYQCWIGLKSHFT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTGATACTAAAACATACGAGTTCCATTATTCATTTAATTTCCGCCACATTCAAACTTTCTTCTTCACAAGATTCTCTGGTGGCATTTCGTAGTTGTAAGTCATT
GTGGCATGACCGGATTCCCTCTAAAACCTCTAAGCCCTTTATAGATTACATGATCCTTATTGCCCACTATGTCAACTCATGGAAGTTTACTTGGAAAGCTACAAATGGAT
CTTCTCATTCTTCCAACAGTGCCACTATTGCTCGAGGAAACGAGGCTGGACCTTATCGAATCACCGACACAATGGCATTTATGTTTGAATCAAGTCTGATCCCTCGCGTA
TGCTCTTGGGCTCTGGAGTCTCCATGCATGGATCATGACTACTACCAATGCTGGATAGGATTGAAATCTCATTTCACAAGTGAAGGAACAACTAGAGACATGGATCCACA
GAAGGTAAAAACTGATGTTGAAAATGGAAGACAGACTGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTGATACTAAAACATACGAGTTCCATTATTCATTTAATTTCCGCCACATTCAAACTTTCTTCTTCACAAGATTCTCTGGTGGCATTTCGTAGTTGTAAGTCATT
GTGGCATGACCGGATTCCCTCTAAAACCTCTAAGCCCTTTATAGATTACATGATCCTTATTGCCCACTATGTCAACTCATGGAAGTTTACTTGGAAAGCTACAAATGGAT
CTTCTCATTCTTCCAACAGTGCCACTATTGCTCGAGGAAACGAGGCTGGACCTTATCGAATCACCGACACAATGGCATTTATGTTTGAATCAAGTCTGATCCCTCGCGTA
TGCTCTTGGGCTCTGGAGTCTCCATGCATGGATCATGACTACTACCAATGCTGGATAGGATTGAAATCTCATTTCACAAGTGAAGGAACAACTAGAGACATGGATCCACA
GAAGGTAAAAACTGATGTTGAAAATGGAAGACAGACTGTGTAG
Protein sequenceShow/hide protein sequence
MALILKHTSSIIHLISATFKLSSSQDSLVAFRSCKSLWHDRIPSKTSKPFIDYMILIAHYVNSWKFTWKATNGSSHSSNSATIARGNEAGPYRITDTMAFMFESSLIPRV
CSWALESPCMDHDYYQCWIGLKSHFTSEGTTRDMDPQKVKTDVENGRQTV