; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G006390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G006390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNDR1/HIN1-like protein 12
Genome locationCmo_Chr04:3165785..3169784
RNA-Seq ExpressionCmoCh04G006390
SyntenyCmoCh04G006390
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600429.1 hypothetical protein SDJN03_05662, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8396.43Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVI AHLDNFQN+IAGRLEV LTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF
        LGLNIAELVADPFDVRKN SVQF YAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG F
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF

KAG7031080.1 hypothetical protein SDJN02_05119, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-8496.43Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVI AHLDNFQN+IAGRLEV LTILVEA NDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF
        LGLNIAELVADPFDVRKN SVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG F
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF

XP_022942740.1 uncharacterized protein LOC111447688 [Cucurbita moschata]4.7e-8799.4Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF
        LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG F
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF

XP_022983092.1 uncharacterized protein LOC111481740 [Cucurbita maxima]3.0e-8196.32Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQN+I GRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQW
        LGLNIAE+VADPFDVRKN SVQFHYAVNSI IPLNPEQMEEVDFALKTDLIQFDLN NTRVQW
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQW

XP_023526921.1 uncharacterized protein LOC111790256 [Cucurbita pepo subsp. pepo]1.5e-8092.86Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIP I VIGAHL+NFQN+IAGRLEVQLTILVEAENDNAKAHASFSDT LF SF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF
        LGLNIAELVADPFDVRKN SVQFHYAVNSI IPLNPEQMEEVDF LKTDLIQF+LNG+TRVQWRVG F
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF

TrEMBL top hitse value%identityAlignment
A0A5D3D1V8 NDR1/HIN1-like protein 121.1e-6577.11Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++ AHLDNFQ +IAGRLEVQLTI+VEA+NDNAKAHASFSD+S FL F
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG
        L + IA+LVADPF+V+KN S++FHYAV S  IPLNPEQME VD+ LK DL  F L GNTRVQWRVG
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG

A0A6J1C468 uncharacterized protein LOC1110081151.7e-6980.12Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPP+LIS+AKRRTHPL+WFAAVLCT++SIAVII G+ VF+GYLVIHPRIPTISVIGAHLD FQ ++AGRLEVQLTI+VEAENDNAKAHASFSDTS FLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG
        LG+ IA LVADPF VRKN S +F YA+ S  IPLNPEQMEE D+ALK+DL +FDL GNTRVQWRVG
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG

A0A6J1FWU7 uncharacterized protein LOC1114476882.3e-8799.4Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF
        LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG F
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF

A0A6J1IYB1 uncharacterized protein LOC1114817401.4e-8196.32Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQN+I GRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQW
        LGLNIAE+VADPFDVRKN SVQFHYAVNSI IPLNPEQMEEVDFALKTDLIQFDLN NTRVQW
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQW

A0A6J1JD00 uncharacterized protein LOC1114833755.0e-6675.9Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ +FIGYLVIHPR+P I +I AHLDNFQN+IAGRLEVQLT++V+AENDNAKAHASFSDTS FL F
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG
        LG+ IA+LVA  FDVRKNGS+  HY V S  IPL PEQMEEVD+ALK+D+ +FDL G+TRVQWRVG
Subjt:  LGLNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26350.1 LOCATED IN: chloroplast2.0e-1126.92Show/hide
Query:  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVA
        R T+ + W AA  C +  + +I+ G+ + I YLV  PR P + +  A+L+    ++   L   LTIL    N + K+   FS  +  L +    IA    
Subjt:  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVA

Query:  DPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG
        +PF V K  S+  +  + S  + L   Q  E+   ++T  +  +L G    +  +G
Subjt:  DPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG

AT4G26490.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.1e-0825.81Show/hide
Query:  RTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVAD
        RT   IW  A  C + S+ +I   +   I +L I PRIP   +  A+L     +        L++LV   N N K    F    + L F    IA  V  
Subjt:  RTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVAD

Query:  PFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG
        PF  +K+ +      + S ++ L      E+   L+ + I++++ G  +V+   G
Subjt:  PFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG

AT5G45320.1 FUNCTIONS IN: molecular_function unknown1.1e-4151.83Show/hide
Query:  PKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLG
        P+L S  +  T P IW AA++C ++SI VI+ G+ VF+GYLVIHPR+P ISV  AHLD  + +I G L+ QLTI++  ENDNAKAHA F +T   LS+ G
Subjt:  PKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLG

Query:  LNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG
          IA L A  F+V K  S+   Y V S  IPLNP  M+ VD+A+K D+I F+L G +R +WRVG
Subjt:  LNIAELVADPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGG
CGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGGCGCTCATCTTGATAACTTCCAGAACGAAATCGCCGGCCGCCTCGAGGTTCAGT
TAACGATCCTCGTCGAGGCGGAGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCTGAGCTTGTAGCC
GATCCATTCGATGTGAGGAAGAACGGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAA
GACGGATCTGATCCAGTTCGATTTGAATGGGAACACGAGAGTTCAATGGCGAGTTGGATTTTTTGTGGGCGATTTTATAGATATGTTTAAAAGATTTGATTTTGACATTG
TTATAACACCGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACTGCTTCGCTCTGGTGTGCGTTTGCCGACGGCCGGCATCTCCTCATCTTCTTTTTCTGTTTTTCTC
TGCTTCTATTTCTTTTACTTTTTGCTTCATTTCTCTTGCCGCCGTGTGGTTAAGCTTGTTCGGGAAATGTTTGGGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGA
AACCGTGGTGAAGATTGCTTGGATTCTTACCTTCCTACAGATCTCA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGG
CGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGGCGCTCATCTTGATAACTTCCAGAACGAAATCGCCGGCCGCCTCGAGGTTCAGT
TAACGATCCTCGTCGAGGCGGAGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCTGAGCTTGTAGCC
GATCCATTCGATGTGAGGAAGAACGGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAA
GACGGATCTGATCCAGTTCGATTTGAATGGGAACACGAGAGTTCAATGGCGAGTTGGATTTTTTGTGGGCGATTTTATAGATATGTTTAAAAGATTTGATTTTGACATTG
TTATAACACCGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACTGCTTCGCTCTGGTGTGCGTTTGCCGACGGCCGGCATCTCCTCATCTTCTTTTTCTGTTTTTCTC
TGCTTCTATTTCTTTTACTTTTTGCTTCATTTCTCTTGCCGCCGTGTGGTTAAGCTTGTTCGGGAAATGTTTGGGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGA
AACCGTGGTGAAGATTGCTTGGATTCTTACCTTCCTACAGATCTCA
Protein sequenceShow/hide protein sequence
MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVA
DPFDVRKNGSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFFVGDFIDMFKRFDFDIVITPAVSNSLGAGRELLRSGVRLPTAGISSSSFSVFL
CFYFFYFLLHFSCRRVVKLVREMFGRIGSRLASTESETVVKIAWILTFLQIS