CuGenDBv2

Gene ID	CmoCh04G006410
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1218)
Genome location	Cmo_Chr04:3171579..3172667
RNA-Seq Expression	CmoCh04G006410
Synteny	CmoCh04G006410
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600430.1 Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-84

95.74

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQ PRRS LA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
        IILL +  + ASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

KAG7031081.1 hypothetical protein SDJN02_05120, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.1e-82

95.63

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQ PRRS LA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKT
        IILL +  + ASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKT
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKT

XP_022941598.1 uncharacterized protein LOC111446907 [Cucurbita moschata]

2.8e-86

96.81

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
        IILL +  + ASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

XP_022982923.1 uncharacterized protein LOC111481621 [Cucurbita maxima]

6.4e-83

94.15

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALAC VIAQVIGNVLFCT+CSLNSRGKK+NDQQ PRRSILA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
        IILL +  + ASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVST SIVCSAVAVLRKSLQIDESRKTSTLPK
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

XP_023543619.1 uncharacterized protein LOC111803449 [Cucurbita pepo subsp. pepo]

1.8e-85

96.28

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQ PRRSILA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
        IILL +  + ASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYL9 Uncharacterized protein

4.1e-59

72.34

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAALACLV+AQVIGN+L CTSCS+NSR KK ++Q  P+R  LA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
           L +  + ASFTVVILLLS A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S CS V SAV V     +I+ESRK++TLPK
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

A0A1S3BTM2 uncharacterized protein LOC103493027

2.9e-57

70.74

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        M K  F YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAALACLV+AQVIGN+L CTSCS+NSR KK ++Q  P+R  LA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
           L +  + ASFTVVILLL AA+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S C+ V SAV V     +++ESRK++TLPK
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

A0A5A7T9R1 DUF1218 domain-containing protein

2.9e-57

70.74

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        M K  F YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAALACLV+AQVIGN+L CTSCS+NSR KK ++Q  P+R  LA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
           L +  + ASFTVVILLL AA+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S C+ V SAV V     +++ESRK++TLPK
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

A0A6J1FSJ4 uncharacterized protein LOC111446907

1.3e-86

96.81

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
        IILL +  + ASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

A0A6J1J6B1 uncharacterized protein LOC111481621

3.1e-83

94.15

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Query:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA
        MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALAC VIAQVIGNVLFCT+CSLNSRGKK+NDQQ PRRSILA
Subjt:  MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILA

Query:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK
        IILL +  + ASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVST SIVCSAVAVLRKSLQIDESRKTSTLPK
Subjt:  IILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

SwissProt top hits

e value

%identity

Alignment

A2RVU1 Protein MODIFYING WALL LIGNIN-1

4.5e-23

38.2

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Query:  FALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLNLQ
        F L A   C++AE  + K           KDL+ DG+ CYLPE++AF  G+AAL C+ +AQ++GNV+ C       RG    D  + R +I  IILL   
Subjt:  FALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLNLQ

Query:  RNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTST
         +  +F V + L+S   SM+R+Q YG GWL+ ECYLVK GV+ A+  L + +  +I+ +    ++ SLQ++   K  T
Subjt:  RNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTST

O65708 Protein MODIFYING WALL LIGNIN-2

1.6e-20

37.58

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Query:  SIVVSFALVAIVSCIAAELHRTKTKDLRLD-GKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLNLQRNLA
        S+V S  LV+ ++C AAE  RT+ +D+R D  + CY+P S AF  G AA+ C  +AQ++GN++     +  +R K+ +  +    ++  ++LL    + +
Subjt:  SIVVSFALVAIVSCIAAELHRTKTKDLRLD-GKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLNLQRNLA

Query:  SFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQ
        +F VV+L+LS A SMSR Q YG GWL  +CYLVK GV+ A+  L ++   ++  SA  +  K  Q
Subjt:  SFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G31720.1 Protein of unknown function (DUF1218)

7.2e-24

37.1

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Query:  LSLSIVVSFALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSIL
        L    +  F L A   C++AE  + K           KDL+ DG+ CYLPE++AF  G+AAL C+ +AQ++GNV+ C       RG    D  + R +I 
Subjt:  LSLSIVVSFALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSIL

Query:  AIILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTST
         IILL    +  +F V + L+S   SM+R+Q YG GWL+ ECYLVK GV+ A+  L + +  +I+ +    ++ SLQ++   K  T
Subjt:  AIILLNLQRNLASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTST

AT4G19370.1 Protein of unknown function (DUF1218)

1.1e-21

37.58

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Query:  SIVVSFALVAIVSCIAAELHRTKTKDLRLD-GKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLNLQRNLA
        S+V S  LV+ ++C AAE  RT+ +D+R D  + CY+P S AF  G AA+ C  +AQ++GN++     +  +R K+ +  +    ++  ++LL    + +
Subjt:  SIVVSFALVAIVSCIAAELHRTKTKDLRLD-GKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLNLQRNLA

Query:  SFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQ
        +F VV+L+LS A SMSR Q YG GWL  +CYLVK GV+ A+  L ++   ++  SA  +  K  Q
Subjt:  SFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQ

Sequences

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CDS sequence

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ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATTGTCGTCTCCTTCGCACTCGTCGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGACCAA
AGATCTCAGATTGGATGGGAAACTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTTT
TGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACGTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTAATCTTCAAAGAAATTTG
GCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGTAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGCTATTTGGTGAAGAGCGG
CGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCAATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTA
GTACACTGCCAAAATAA

mRNA sequence

Show/hide mRNA sequence

CAAAATAGAAAAGCCCCTTAAGAGCTCCCAATTTCCTCTTTAGTCACATCGAAGCTACGCCTTTTCCTGTGTTTTATATTCATTCTCCTCATAACACCACACCCCGCCAT
GGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATTGTCGTCTCCTTCGCACTCGTCGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGACCAAAG
ATCTCAGATTGGATGGGAAACTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTTTTG
TTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACGTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTAATCTTCAAAGAAATTTGGC
AAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGTAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGCTATTTGGTGAAGAGCGGCG
TATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCAATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGT
ACACTGCCAAAATAAAAAACAGGAAATAAAAGCGTCGCAACGGGAACGGCAACGGCGGCGATCGGAAGAAGGCGGCG

Protein sequence

Show/hide protein sequence

MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLNLQRNL
ASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

CmoCh04G006410 (gene) of Cucurbita moschata (Rifu) v1 genome