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CmoCh04G006600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G006600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein
Genome locationCmo_Chr04:3268178..3269385
RNA-Seq ExpressionCmoCh04G006600
SyntenyCmoCh04G006600
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451897.1 PREDICTED: uncharacterized protein LOC103493052 [Cucumis melo]1.9e-1373.58Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQ++G+P++GIVAAAAITFYAVSFSE+REKSF+DLDE ED+  GF+MT++
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
XP_022136426.1 uncharacterized protein LOC111008135 [Momordica charantia]9.0e-1683.02Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQQLG+P++GIVAAAAITFYAVSF+E+REKSF+DLDESEDEN GFKMT++
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
XP_022983590.1 uncharacterized protein LOC111482149 [Cucurbita maxima]1.1e-1692.45Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQQ GVPL+GIVAAAAITFYAVSFSEIREKSFRDLDESEDEN GFKMTA+
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
XP_023545078.1 uncharacterized protein LOC111804483 [Cucurbita pepo subsp. pepo]6.7e-1998.11Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTA+
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
XP_038900556.1 uncharacterized protein LOC120087738 [Benincasa hispida]1.7e-1477.36Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQ++G+P++GIVAAAAITFYAVSFSE+REKSFRDLDESED+  GF+MT++
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
TrEMBL top hitse value%identityAlignment
A0A0A0KVD4 Uncharacterized protein9.1e-1473.58Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQ++G+P++GIVAAAAITFYAVSFSE+REKSF+DLDE ED+  GF+MT++
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
A0A1S3BRZ5 uncharacterized protein LOC1034930529.1e-1473.58Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQ++G+P++GIVAAAAITFYAVSFSE+REKSF+DLDE ED+  GF+MT++
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
A0A5D3CYP3 Uncharacterized protein9.1e-1473.58Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQ++G+P++GIVAAAAITFYAVSFSE+REKSF+DLDE ED+  GF+MT++
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
A0A6J1C3G9 uncharacterized protein LOC1110081354.4e-1683.02Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQQLG+P++GIVAAAAITFYAVSF+E+REKSF+DLDESEDEN GFKMT++
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
A0A6J1J6A4 uncharacterized protein LOC1114821495.1e-1792.45Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
        MDGLQQ GVPL+GIVAAAAITFYAVSFSEIREKSFRDLDESEDEN GFKMTA+
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTAT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22210.1 unknown protein1.3e-0957.14Show/hide
Query:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFK
        M+G+  + +P++GIVA + +TFYAVSF+EIREKSF+D+ +SE+E  GFK
Subjt:  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGATTGCAGCAATTGGGGGTTCCATTGATGGGCATTGTTGCAGCGGCAGCCATTACCTTCTACGCCGTAAGCTTTTCTGAGATTCGAGAGAAATCATTCAGAGA
TTTGGATGAATCTGAGGATGAGAATCCAGGGTTTAAGATGACTGCAACTTTCATTCCTTATTTTGGTGCCTTATCTGTATATTTTAAGTTATACACTTGGAGACCACGAT
CAACCGGTTTGAGTGACATTTCTCAACAGCATCCAAAGGCTTTATTTCAACTTACAAATTGGTGTGGGACAAGATTACAGACTATCATTGATGTCTTCTGTACAAGACAC
AAGCCGATCAACTTTTCACCACCATCAAAGCATTTGACCATCACGGGCAAGGGTTTCTTTGTTCCTTTAGAGCAAGCAAGACAGGATCTGGTTCCTAAAGCCCTTTCGCT
GTAA
mRNA sequenceShow/hide mRNA sequence
TTGGCTCCTCAAAATCAAATTATTATTATTATTTTTAATTAAAACCTTATCTAAAATCTCCAAAGGGCAAAGGGCAAAGGGCAAATACGACTGAACTCCACAGAAAGTTG
AAAGCGAAAATGGATGGATTGCAGCAATTGGGGGTTCCATTGATGGGCATTGTTGCAGCGGCAGCCATTACCTTCTACGCCGTAAGCTTTTCTGAGATTCGAGAGAAATC
ATTCAGAGATTTGGATGAATCTGAGGATGAGAATCCAGGGTTTAAGATGACTGCAACTTTCATTCCTTATTTTGGTGCCTTATCTGTATATTTTAAGTTATACACTTGGA
GACCACGATCAACCGGTTTGAGTGACATTTCTCAACAGCATCCAAAGGCTTTATTTCAACTTACAAATTGGTGTGGGACAAGATTACAGACTATCATTGATGTCTTCTGT
ACAAGACACAAGCCGATCAACTTTTCACCACCATCAAAGCATTTGACCATCACGGGCAAGGGTTTCTTTGTTCCTTTAGAGCAAGCAAGACAGGATCTGGTTCCTAAAGC
CCTTTCGCTGTAA
Protein sequenceShow/hide protein sequence
MDGLQQLGVPLMGIVAAAAITFYAVSFSEIREKSFRDLDESEDENPGFKMTATFIPYFGALSVYFKLYTWRPRSTGLSDISQQHPKALFQLTNWCGTRLQTIIDVFCTRH
KPINFSPPSKHLTITGKGFFVPLEQARQDLVPKALSL