; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G006660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G006660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTify domain-containing protein
Genome locationCmo_Chr04:3313748..3314334
RNA-Seq ExpressionCmoCh04G006660
SyntenyCmoCh04G006660
Gene Ontology termsGO:0048583 - regulation of response to stimulus (biological process)
InterPro domainsIPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600453.1 putative aquaporin NIP5-1, partial [Cucurbita argyrosperma subsp. sororia]4.8e-5888.89Show/hide
Query:  MKKEVKGIGIWQMGREFSLELCLCPSS---------PAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMP
        MKKEVKGIGIWQMGREFSLELCL PSS          AIPMMAMPLNHQKQIMVFNNGTASVCD TELQVRAILGIASQERN SK QWWSNPERLSLQMP
Subjt:  MKKEVKGIGIWQMGREFSLELCLCPSS---------PAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMP

Query:  NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        NGNAGFSIKKSLQRFLQRRNTRRIRSM PYHKPRT
Subjt:  NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

KAG7031101.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-44100Show/hide
Query:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
Subjt:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

XP_022941937.1 uncharacterized protein LOC111447151 [Cucurbita moschata]3.1e-65100Show/hide
Query:  MKKEVKGIGIWQMGREFSLELCLCPSSPAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIK
        MKKEVKGIGIWQMGREFSLELCLCPSSPAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIK
Subjt:  MKKEVKGIGIWQMGREFSLELCLCPSSPAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIK

Query:  KSLQRFLQRRNTRRIRSMYPYHKPRT
        KSLQRFLQRRNTRRIRSMYPYHKPRT
Subjt:  KSLQRFLQRRNTRRIRSMYPYHKPRT

XP_022988981.1 uncharacterized protein LOC111486178 [Cucurbita maxima]1.4e-4987.8Show/hide
Query:  MGREFSLELCLCPSS---------PAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSL
        MGREFSLELCL PSS          AIPMMAMPLNHQKQIMVFNNGTASVCD TELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSL
Subjt:  MGREFSLELCLCPSS---------PAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSL

Query:  QRFLQRRNTRRIRSMYPYHKPRT
        QRFLQRRNTRRIRSM PYHK  T
Subjt:  QRFLQRRNTRRIRSMYPYHKPRT

XP_023526418.1 uncharacterized protein LOC111789898 [Cucurbita pepo subsp. pepo]7.1e-6292.59Show/hide
Query:  MKKEVKGIGIWQMGREFSLELCLCPSSP---------AIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMP
        MKKEVKGIGIWQMGREFSLELCLCPSSP         AIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMP
Subjt:  MKKEVKGIGIWQMGREFSLELCLCPSSP---------AIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMP

Query:  NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        NGNAGFSIKKSLQRFLQRRNTRRIRSM PYHKPRT
Subjt:  NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

TrEMBL top hitse value%identityAlignment
A0A6J1C4G2 uncharacterized protein LOC1110081924.5e-3066.94Show/hide
Query:  MGREFSLELCLCPSSPA-------IPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMP---NGNAGFSIKKS
        MGREFSLEL L PSS            + M +NHQ+QIMVF NGT S CDLTELQ RAIL +ASQE+N +    W+NPE LSLQMP   NGNAGFSIKKS
Subjt:  MGREFSLELCLCPSSPA-------IPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMP---NGNAGFSIKKS

Query:  LQRFLQRRNTRRIRSMYPYHK
        LQRFLQRR TRRI+SM PYHK
Subjt:  LQRFLQRRNTRRIRSMYPYHK

A0A6J1ET94 uncharacterized protein LOC1114375142.1e-2765.12Show/hide
Query:  MGREFSLELCLCPSS---------PAIP-MMAMP--LNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLS-LQMP-----NGN
        MGREFSLEL L PSS          AIP MMA P  LN Q+QIMVF NGT S+CD TELQ RAIL +AS+ER+S+ S+ W++PE LS LQMP     NGN
Subjt:  MGREFSLELCLCPSS---------PAIP-MMAMP--LNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLS-LQMP-----NGN

Query:  AGFSIKKSLQRFLQRRNTRRIRSMYPYHK
        A F IKKSLQRFLQRR  RRIRSM PYHK
Subjt:  AGFSIKKSLQRFLQRRNTRRIRSMYPYHK

A0A6J1FNU6 uncharacterized protein LOC1114471511.5e-65100Show/hide
Query:  MKKEVKGIGIWQMGREFSLELCLCPSSPAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIK
        MKKEVKGIGIWQMGREFSLELCLCPSSPAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIK
Subjt:  MKKEVKGIGIWQMGREFSLELCLCPSSPAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIK

Query:  KSLQRFLQRRNTRRIRSMYPYHKPRT
        KSLQRFLQRRNTRRIRSMYPYHKPRT
Subjt:  KSLQRFLQRRNTRRIRSMYPYHKPRT

A0A6J1J887 uncharacterized protein LOC1114826357.2e-2863.7Show/hide
Query:  MGREFSLELCLCPSS---------PAIP-MMAMP--LNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLS-LQMP--------
        MGREFSLEL L PSS          AIP MMAMP  LN Q+QIMVF NGT S+CD TELQ RAIL +AS+ER+S+    W+NPE LS LQMP        
Subjt:  MGREFSLELCLCPSS---------PAIP-MMAMP--LNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLS-LQMP--------

Query:  ---NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHK
           NGNAGF IKKSLQRFLQRR  RRIRSM PYHK
Subjt:  ---NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHK

A0A6J1JIQ6 uncharacterized protein LOC1114861786.7e-5087.8Show/hide
Query:  MGREFSLELCLCPSS---------PAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSL
        MGREFSLELCL PSS          AIPMMAMPLNHQKQIMVFNNGTASVCD TELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSL
Subjt:  MGREFSLELCLCPSS---------PAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSL

Query:  QRFLQRRNTRRIRSMYPYHKPRT
        QRFLQRRNTRRIRSM PYHK  T
Subjt:  QRFLQRRNTRRIRSMYPYHKPRT

SwissProt top hitse value%identityAlignment
Q8LBM2 Protein TIFY 5A2.0e-0640.62Show/hide
Query:  PLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSL-----QMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPR
        P    ++I +F NG      D+T LQ R+I+ IAS+E  +  S   S+P   S      Q+PN  A  S+KKSLQ FLQ+R   RI++  PYH  R
Subjt:  PLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSL-----QMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPR

Arabidopsis top hitse value%identityAlignment
AT1G30135.1 jasmonate-zim-domain protein 81.4e-0740.62Show/hide
Query:  PLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSL-----QMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPR
        P    ++I +F NG      D+T LQ R+I+ IAS+E  +  S   S+P   S      Q+PN  A  S+KKSLQ FLQ+R   RI++  PYH  R
Subjt:  PLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSL-----QMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPR

AT2G34600.1 jasmonate-zim-domain protein 73.2e-0432.32Show/hide
Query:  MAMPLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGF-----SIKKSLQRFLQRRNTRRIRSMYPYHKPR
        ++ P    + + +F NG   V  DLT L+  AIL +AS++         S+       +PN +  F     S+K+SL  FLQ+R+  RI++  PYH+ R
Subjt:  MAMPLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGF-----SIKKSLQRFLQRRNTRRIRSMYPYHKPR

AT3G22275.1 unknown protein5.5e-0436.99Show/hide
Query:  KQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTR
        K+I  F +G  S  DL E+Q+RAI+ +AS++R  +  +    P RL   +     G S+K+S++RFL++R  R
Subjt:  KQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAGAGGTAAAGGGAATTGGCATTTGGCAAATGGGAAGGGAGTTCAGTTTGGAGCTTTGTCTTTGCCCATCTTCTCCTGCAATTCCCATGATGGCCATGCCATT
GAATCATCAGAAGCAGATCATGGTTTTCAATAATGGAACAGCTTCGGTCTGTGACTTGACTGAACTCCAGGTAAGAGCCATATTAGGGATAGCAAGCCAAGAGAGGAATA
GCAGCAAGAGCCAATGGTGGAGCAACCCAGAACGGTTGAGTCTGCAAATGCCAAATGGTAATGCAGGTTTCTCCATTAAGAAATCTCTTCAGAGGTTCCTACAAAGGAGG
AACACCAGAAGAATTCGATCCATGTATCCGTATCACAAACCACGTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAAGAGGTAAAGGGAATTGGCATTTGGCAAATGGGAAGGGAGTTCAGTTTGGAGCTTTGTCTTTGCCCATCTTCTCCTGCAATTCCCATGATGGCCATGCCATT
GAATCATCAGAAGCAGATCATGGTTTTCAATAATGGAACAGCTTCGGTCTGTGACTTGACTGAACTCCAGGTAAGAGCCATATTAGGGATAGCAAGCCAAGAGAGGAATA
GCAGCAAGAGCCAATGGTGGAGCAACCCAGAACGGTTGAGTCTGCAAATGCCAAATGGTAATGCAGGTTTCTCCATTAAGAAATCTCTTCAGAGGTTCCTACAAAGGAGG
AACACCAGAAGAATTCGATCCATGTATCCGTATCACAAACCACGTACCTAATTCAAAGTTTATGCCTCCCAACCTCATCAATCA
Protein sequenceShow/hide protein sequence
MKKEVKGIGIWQMGREFSLELCLCPSSPAIPMMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRR
NTRRIRSMYPYHKPRT