CuGenDBv2

Gene ID	CmoCh04G007000
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L10
Genome location	Cmo_Chr04:3476948..3477610
RNA-Seq Expression	CmoCh04G007000
Synteny	CmoCh04G007000
Gene Ontology terms	GO:0000027 - ribosomal large subunit assembly (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001197 - Ribosomal protein L10e IPR016180 - Ribosomal protein L10e/L16 IPR018255 - Ribosomal protein L10e, conserved site IPR036920 - Ribosomal protein L10e/L16 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004137249.1 60S ribosomal protein L10 [Cucumis sativus]

1.1e-123

98.64

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLK+KAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQ A
Subjt:  GCHGPLANRQPGRAFLSQAA

XP_008451785.1 PREDICTED: 60S ribosomal protein L10-like [Cucumis melo]

1.5e-123

98.18

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLK+KAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQ A
Subjt:  GCHGPLANRQPGRAFLSQAA

XP_022942135.1 60S ribosomal protein L10-like isoform X1 [Cucurbita moschata]

2.1e-125

100

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQAA
Subjt:  GCHGPLANRQPGRAFLSQAA

XP_022942137.1 60S ribosomal protein L10-like isoform X2 [Cucurbita moschata]

2.1e-125

100

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQAA
Subjt:  GCHGPLANRQPGRAFLSQAA

XP_022982620.1 60S ribosomal protein L10 [Cucurbita maxima]

1.0e-124

99.55

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLK KAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQAA
Subjt:  GCHGPLANRQPGRAFLSQAA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BT36 60S ribosomal protein L10-like

7.2e-124

98.18

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLK+KAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQ A
Subjt:  GCHGPLANRQPGRAFLSQAA

A0A5D3CWP6 60S ribosomal protein L10-like

7.2e-124

98.18

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLK+KAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQ A
Subjt:  GCHGPLANRQPGRAFLSQAA

A0A6J1FU16 60S ribosomal protein L10-like isoform X2

1.0e-125

100

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQAA
Subjt:  GCHGPLANRQPGRAFLSQAA

A0A6J1FVN9 60S ribosomal protein L10-like isoform X1

1.0e-125

100

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQAA
Subjt:  GCHGPLANRQPGRAFLSQAA

A0A6J1J383 60S ribosomal protein L10

5.0e-125

99.55

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLK KAENKILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHGPLANRQPGRAFLSQAA
Subjt:  GCHGPLANRQPGRAFLSQAA

SwissProt top hits

e value

%identity

Alignment

P93847 60S ribosomal protein L10

8.8e-119

93.15

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD N  +AQEALRRAKFKFPGRQKIIVSRKWGFTKFSR DYLK+K+EN+I+PDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQA
        G HGPLA RQPGRAFLS +
Subjt:  GCHGPLANRQPGRAFLSQA

Q08770 60S ribosomal protein L10-2

6.5e-114

88.64

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RADY K + E +I+PDGVNAK L
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
         CHGPLANRQPG AFLS  A
Subjt:  GCHGPLANRQPGRAFLSQAA

Q93VT9 60S ribosomal protein L10-1

5.5e-113

88.89

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD+ K + E +++PDGVNAK L
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFL
         CHGPLANRQPG AFL
Subjt:  GCHGPLANRQPGRAFL

Q9M5M7 60S ribosomal protein L10

3.9e-119

92.27

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKDNN  NAQEALRRAKFKFPGRQKIIVSRKWGFTK +RADY + K+EN+ILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
        GCHG LANR+PGRAF+   A
Subjt:  GCHGPLANRQPGRAFLSQAA

Q9SPB3 60S ribosomal protein L10

1.1e-118

91.24

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD N  +AQEALRRAKFKFP RQKIIVSRKWGFTKF+R DY+K+K++N+ILPDGVNAKLL
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLS
        GCHGPLANRQPG+AF++
Subjt:  GCHGPLANRQPGRAFLS

Arabidopsis top hits

e value

%identity

Alignment

AT1G14320.1 Ribosomal protein L16p/L10e family protein

3.9e-114

88.89

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD+ K + E +++PDGVNAK L
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFL
         CHGPLANRQPG AFL
Subjt:  GCHGPLANRQPGRAFL

AT1G14320.2 Ribosomal protein L16p/L10e family protein

3.0e-74

64.81

Show/hide

Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM                        
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
                                         VLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD+ K + E +++PDGVNAK L
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFL
         CHGPLANRQPG AFL
Subjt:  GCHGPLANRQPGRAFL

AT1G26910.1 Ribosomal protein L16p/L10e family protein

4.6e-115

88.64

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Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RADY K + E +I+PDGVNAK L
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLSQAA
         CHGPLANRQPG AFLS  A
Subjt:  GCHGPLANRQPGRAFLSQAA

AT1G66580.1 senescence associated gene 24

1.5e-113

88.94

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Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKDN+G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+Y K +A  +I+PDGVNAK L
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLL

Query:  GCHGPLANRQPGRAFLS
          HGPLANRQPG AF+S
Subjt:  GCHGPLANRQPGRAFLS

Sequences

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CDS sequence

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ATGGGGAGAAGACCTGCTAGATGTTACCGACAGATTAAAAACAAACCGTACCCTAAGTCACGATTTTGCCGTGGTGTACCTGATCCTAAGATCAGGATCTATGACGTGGG
AATGAAAAGGAAAGGAGTAGATGAATTTCCATTCTGTGTCCACCTTGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAAGCTTTAGAAGCAGCTAGGATTGCCTGCAATA
AGTACATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGG
CTCCAAACTGGCATGAGAGGTGCCTTTGGGAAACCACAGGGAACCTGTGCGAGAGTGGCCATTGGGCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGTCAGAA
CGCACAGGAGGCCCTCCGCCGTGCTAAGTTCAAGTTCCCTGGTCGTCAGAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTCAGCCGAGCTGATTACCTGAAAT
TCAAGGCAGAGAACAAGATTCTTCCAGATGGTGTGAATGCCAAGCTTCTTGGATGCCATGGGCCTCTAGCCAACCGTCAGCCTGGAAGAGCTTTTCTGTCTCAAGCTGCT
TAG

mRNA sequence

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Protein sequence

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MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADR
LQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA

CmoCh04G007000 (gene) of Cucurbita moschata (Rifu) v1 genome