CuGenDBv2

Gene ID	CmoCh04G007080
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Cyclin/Brf1-like TBP-binding protein
Genome location	Cmo_Chr04:3508415..3511494
RNA-Seq Expression	CmoCh04G007080
Synteny	CmoCh04G007080
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

GER33612.1 cyclin/Brf1-like TBP-binding protein [Striga asiatica]

1.4e-07

50.85

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Query:  DVASGHLRRRTRERNSLVLASELVGGMNVLIAGPAQRRLISTTQNGGFSHFADIALNLH
        D+  G  RRR R+R+ LVL  EL+GG+N  IAGPAQRRL+ST ++ G      + +NLH
Subjt:  DVASGHLRRRTRERNSLVLASELVGGMNVLIAGPAQRRLISTTQNGGFSHFADIALNLH

TrEMBL top hits

e value

%identity

Alignment

A0A5A7PM16 Cyclin/Brf1-like TBP-binding protein

6.6e-08

50.85

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Query:  DVASGHLRRRTRERNSLVLASELVGGMNVLIAGPAQRRLISTTQNGGFSHFADIALNLH
        D+  G  RRR R+R+ LVL  EL+GG+N  IAGPAQRRL+ST ++ G      + +NLH
Subjt:  DVASGHLRRRTRERNSLVLASELVGGMNVLIAGPAQRRLISTTQNGGFSHFADIALNLH

A0A803NXX0 Uncharacterized protein

1.8e-05

49.09

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Query:  VASGHLRRRTRERNSLVLASELVGGMNVLIAGPAQRRLISTTQNGGFSHFADIAL
        +A GH+R R+ +RN LVL  E VGG+N+L+A PAQRRL+   Q+  F     +AL
Subjt:  VASGHLRRRTRERNSLVLASELVGGMNVLIAGPAQRRLISTTQNGGFSHFADIAL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGACCACTGATGTCGCATCTGGGCATCTGAGACGAAGAACCAGAGAGAGGAACTCTCTGGTGCTTGCTAGCGAGCTTGTTGGCGGCATGAATGTTCTCATCGCAGGCCC
AGCACAGCGCCGCCTCATCAGCACAACACAGAACGGTGGCTTCAGCCATTTCGCAGACATTGCACTGAATCTTCATCCTAACCTTCTCTCGAACCCTCTAAAACCCACTC
ATGATCACTAA

mRNA sequence

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Protein sequence

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MTTDVASGHLRRRTRERNSLVLASELVGGMNVLIAGPAQRRLISTTQNGGFSHFADIALNLHPNLLSNPLKPTHDH

CmoCh04G007080 (gene) of Cucurbita moschata (Rifu) v1 genome