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CmoCh04G007160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G007160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:3560112..3560748
RNA-Seq ExpressionCmoCh04G007160
SyntenyCmoCh04G007160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600501.1 hypothetical protein SDJN03_05734, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4696.94Show/hide
Query:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
        MPISTESSTPSSSCFI+CA PTIPSVQLVSKSVSDRLLGKFF ASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
Subjt:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
KAG7031141.1 hypothetical protein SDJN02_05180, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-4796.97Show/hide
Query:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRI
        MPISTESSTPSSSCFI+CA PTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR+
Subjt:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRI
XP_022942868.1 uncharacterized protein LOC111447770 [Cucurbita moschata]6.4e-4899Show/hide
Query:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
        MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR F
Subjt:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
XP_022983484.1 uncharacterized protein LOC111482071 [Cucurbita maxima]1.9e-4798Show/hide
Query:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
        MPISTESSTPSSSCFI+CATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR F
Subjt:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
XP_023516499.1 uncharacterized protein LOC111780353 [Cucurbita pepo subsp. pepo]1.2e-4696Show/hide
Query:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
        MPISTESSTPSSSCFI+C TPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSP+DVCSGYEVLSKLEKAKTAWRKFVICFR F
Subjt:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
TrEMBL top hitse value%identityAlignment
A0A6J1CMP9 uncharacterized protein LOC1110128781.1e-3781.37Show/hide
Query:  MPIS--TESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
        MPIS  + SS+ SSS F++C +PT PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSP +VCSGYEV SKL+ AK AWRKFVICFR
Subjt:  MPIS--TESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR

Query:  IF
         F
Subjt:  IF
A0A6J1EYJ9 uncharacterized protein LOC1114376037.4e-3479.79Show/hide
Query:  STESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICF
        S+ SS+ SSS F+ CATP   SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLE AK AWRK + CF
Subjt:  STESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICF
A0A6J1FVV1 uncharacterized protein LOC1114477703.1e-4899Show/hide
Query:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
        MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR F
Subjt:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
A0A6J1J7J0 uncharacterized protein LOC1114820719.0e-4898Show/hide
Query:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
        MPISTESSTPSSSCFI+CATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR F
Subjt:  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIF
A0A6J1J8D3 uncharacterized protein LOC111482673 isoform X18.2e-3376.77Show/hide
Query:  MPISTE--SSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICF
        MP S +  SS+ SSS F+ CATP   SVQLVSKS SDRLL KFFDAS+F+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLE  K AWRKF+ CF
Subjt:  MPISTE--SSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15140.1 unknown protein9.3e-0547.06Show/hide
Query:  TIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLD
        T   V+ +   +   LL KF D S F FDY QSSLWSP +PR     S LD
Subjt:  TIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCAAATGCGCCACTCCGACGATTCCGAGTGTTCAACTCGTGTCGAAATCGGTGTCGGATCGGCT
TCTCGGCAAGTTCTTTGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGCTCGATGTTT
GCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGTAATCTGTTTTAGAATTTTTTTGAGAAAATTTGAAGAAATTGCCTTCAAT
TTCCATAATGAACTTACTGGCAAAGAATTTTTAGTCATGAATCTGTTTCAGATTCGAAATCGATTTGCTGTAATGTGCAAGAACTGA
mRNA sequenceShow/hide mRNA sequence
CTCTGTCTTCGTCTTTGCCGAGTAAGTTTCTATTCTCCCTGTCCCTCCGATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCAAATGCGCCACTC
CGACGATTCCGAGTGTTCAACTCGTGTCGAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTTGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGG
TCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGCTCGATGTTTGCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGT
AATCTGTTTTAGAATTTTTTTGAGAAAATTTGAAGAAATTGCCTTCAATTTCCATAATGAACTTACTGGCAAAGAATTTTTAGTCATGAATCTGTTTCAGATTCGAAATC
GATTTGCTGTAATGTGCAAGAACTGA
Protein sequenceShow/hide protein sequence
MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRIFLRKFEEIAFN
FHNELTGKEFLVMNLFQIRNRFAVMCKN