CuGenDBv2

Gene ID	CmoCh04G007170
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	ras-related protein RABA1b-like
Genome location	Cmo_Chr04:3562533..3565212
RNA-Seq Expression	CmoCh04G007170
Synteny	CmoCh04G007170
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0042538 - hyperosmotic salinity response (biological process) GO:0060627 - regulation of vesicle-mediated transport (biological process) GO:0012505 - endomembrane system (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR005225 - Small GTP-binding protein domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004137233.1 ras-related protein RABA1b [Cucumis sativus]

9.5e-111

87.04

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSAS+VPAQGEKINI+DESGLNRIKCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

XP_008451755.1 PREDICTED: ras-related protein RABA1b-like [Cucumis melo]

2.1e-110

86.64

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSAS+VPAQGEKINI+DESGLNR+KCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

XP_022142868.1 ras-related protein Rab11D-like [Momordica charantia]

2.1e-110

87.04

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD KVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSASSVPAQGEKINI+DESGLNRIKCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

XP_022942927.1 ras-related protein RABA1b-like [Cucurbita moschata]

1.9e-111

87.85

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

XP_022982677.1 ras-related protein RABA1b-like [Cucurbita maxima]

4.3e-111

87.45

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSASSVPAQGEKINI+DESGLNRIKCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXK6 Uncharacterized protein

4.6e-111

87.04

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSAS+VPAQGEKINI+DESGLNRIKCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

A0A1S3BSA1 ras-related protein RABA1b-like

1.0e-110

86.64

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSAS+VPAQGEKINI+DESGLNR+KCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

A0A6J1CPC3 ras-related protein Rab11D-like

1.0e-110

87.04

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD KVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSASSVPAQGEKINI+DESGLNRIKCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

A0A6J1FRL8 ras-related protein RABA1b-like

9.3e-112

87.85

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

A0A6J1IX83 ras-related protein RABA1b-like

2.1e-111

87.45

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYHIVSKKAVEGGENGSASSVPAQGEKINI+DESGLNRIKCCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

SwissProt top hits

e value

%identity

Alignment

Q01111 Ras-related protein YPT3

6.7e-91

70.56

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++LN+D KVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRH T+ENV RWLKEL++HTD NIVVML+GNKSDLRHLVAV T++ K  AERE LYF+ETSALEA NVE AF E 
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDE-SGLNRIKCCSS
        LTQIY IVSKKAVE G+ G+ SS P +GE INI+DE S   +  CCSS
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDE-SGLNRIKCCSS

Q39222 Ras-related protein RABA1b

1.4e-93

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDGKV+KAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIVVMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGLNRIKCCSS
        LTQIY I SKK VE GE+G+A SVP +GEKI ++ D S L ++ CCS+
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGLNRIKCCSS

Q40194 Ras-related protein Rab11D

1.4e-93

71.37

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TLNVD KV+KAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTR ATFEN  RWLKEL++HTD NIVVML+GNKSDLRHLVAVPTEDGKS+AERESLYF+ETSALEA NVE AF EV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESG-LNRIKCCSS
        LTQIY IVSK+AVE G++GS+S +P++G+ IN++++S  L R  CCS+
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESG-LNRIKCCSS

Q40195 Ras-related protein Rab11E

3.9e-91

69.76

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGY+ADD+YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++LN+DGKVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTR  TFE   RWLKEL++HTD NIVVML+GNKSDLRHLV V TEDGK++AE+ESLYF+ETSALEA NVE AF+EV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESG-LNRIKCCSS
        LTQIY IVSK+AVE G+  S S VP+QG+ IN+ ++S  LNR +CCS+
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESG-LNRIKCCSS

Q9SN35 Ras-related protein RABA1d

1.9e-90

70.85

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ KVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIVVMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYH+VSKKA+E GE+  + +VP++GEKI++ D S + +  CCS+
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

Arabidopsis top hits

e value

%identity

Alignment

AT1G06400.1 Ras-related small GTP-binding family protein

7.1e-88

67.34

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRAD++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+T  V+GKV+KAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALL+YDVTRHATFEN  RWL+EL+ HTD NIVVML+GNK DLRHLVAV TE+ K++AERESLYF+ETSAL+A NVE AF EV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGLNRIKCCSS
        LTQI+ IVSK++V+GG  G ++ +P +GE IN++ D S L R+ CCS+
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGLNRIKCCSS

AT1G16920.1 RAB GTPase homolog A1B

1.0e-94

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDGKV+KAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIVVMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGLNRIKCCSS
        LTQIY I SKK VE GE+G+A SVP +GEKI ++ D S L ++ CCS+
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGLNRIKCCSS

AT4G18800.1 RAB GTPase homolog A1D

1.4e-91

70.85

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ KVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIVVMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS
        LTQIYH+VSKKA+E GE+  + +VP++GEKI++ D S + +  CCS+
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS

AT5G45750.1 RAB GTPase homolog A1C

3.1e-91

71.37

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD KVIKAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRH+TFENV+ WLKEL+NHTD NIVVMLVGNKSDLRHLVAV TED KS+AE+ESLYF+ETSALEA NVE AFAEV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINI-RDESGLNRIKCCSS
        LTQI+HIVSKKA+E      +++VP++G+KI+I +D S + +  CCS+
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINI-RDESGLNRIKCCSS

AT5G60860.1 RAB GTPase homolog A1F

2.0e-82

62.8

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL
        MA YRADD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++VD K++KAQIWDTAGQER                          
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFL

Query:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV
            YRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL++HTD+NIV+M VGNK+DLRHL AV TED K++AERE+ +F+ETSALE++NVE AF EV
Subjt:  FIFVYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEV

Query:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINI---RDESGLNRIKCCSS
        L+QIY +VS+KA++ G++ +A     +G+ IN+    D S + ++ CCS+
Subjt:  LTQIYHIVSKKAVEGGENGSASSVPAQGEKINI---RDESGLNRIKCCSS

Sequences

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CDS sequence

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mRNA sequence

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ATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGTGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGA
GTTCAACCTCGAGTCTAAATCCACCATTGGTGTCGAATTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGATACTGCTGGCCAAGAAA
GGTTTTCTTTCCTTCTTCTCTTCTCTGGATTTCTCGCCTTCTCTTGCCTTCTCTTGCCTTCTCCTTGGTTTTGCTTCCTGTTCATTTTCGTGTACCGTGCCATCACCAGC
GCATACTATCGTGGAGCAGTTGGTGCACTCCTTGTATACGATGTTACTCGTCATGCAACATTTGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTC
CAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTGGCTGTTCCAACCGAGGATGGAAAGTCGTACGCTGAGAGGGAATCACTGTACTTCATAG
AAACCTCTGCACTGGAAGCAGTCAACGTCGAAAAAGCATTCGCCGAGGTCCTGACTCAGATCTATCACATAGTAAGCAAGAAGGCTGTTGAAGGTGGAGAAAACGGATCT
GCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAGAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGATAATCTTTCGAAATGATTTT
GGATTCTATGTACTGTAATAATTTTTTTTCTTTTGAAGAGAGACGAGAACAAAAAAGAGGAGGTTAAAGGAAAAGGAAGATATCCCCAAGACCTTCAATCTTGCTGTATT
ACAGAAGAGGAGTAACAGCCACATGATTGTTTTGTGGTTGCTGTTGTGTCCATTTCAAGTTTGGTTTCTACGGTAAATGTCCTCAATTTTAGTTAAAGTTCTTTAAGAAT
AATTTTTATTTCTAAAAATTTGCTTAAGTTAGGTATGTGATATTCTGCTCTATACATACACTACGAGTGGCTAATGATTTGTTTCTTTAATTGGGTAATCATTTTGCTTC
GCTTCAATTTGTAGTTGCTAATTATATATCTTACTACTTGAATTTTACCCAACTTTATTTTGTTTTTCATTCTATTATATATATATATTCATATTCTTAAGTCA

Protein sequence

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MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITS
AYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGS
ASSVPAQGEKINIRDESGLNRIKCCSS

CmoCh04G007170 (gene) of Cucurbita moschata (Rifu) v1 genome