CuGenDBv2

Gene ID	CmoCh04G007240
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	GDSL esterase/lipase At1g71691
Genome location	Cmo_Chr04:3607398..3610846
RNA-Seq Expression	CmoCh04G007240
Synteny	CmoCh04G007240
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0004176 - ATP-dependent peptidase activity (molecular function) GO:0004222 - metalloendopeptidase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR037219 - Peptidase M41-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600510.1 putative inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-84

93.53

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Query:  MRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTDACCGFGRYN------DNVWNDLRTTMCYPK
        MRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNS LIVSFCFHLGFNVTTDACCGFGRYN      DNVWNDL T MCYPK
Subjt:  MRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTDACCGFGRYN------DNVWNDLRTTMCYPK

Query:  NLKERLSQVVFGWLDDESYMFERQPQLLHRLQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLAPEILRM
        NLKERLSQVVFGWLDDESYMFERQPQLLH LQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLA EILRM
Subjt:  NLKERLSQVVFGWLDDESYMFERQPQLLHRLQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLAPEILRM

KAG7031148.1 putative inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.2e-39

94.19

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Query:  DNVWNDLRTTMCYPKNLKERLSQVVFGWLDDESYMFERQPQLLHRLQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLAPEILRML
        DNVWNDL TTMCYPKNLKERLSQVVFGWLDDESYMFERQPQLLH LQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLA EILR++
Subjt:  DNVWNDLRTTMCYPKNLKERLSQVVFGWLDDESYMFERQPQLLHRLQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLAPEILRML

XP_004145656.2 GDSL esterase/lipase At1g71691 [Cucumis sativus]

8.4e-32

39.92

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Query:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------
        LGQHISFTQ+IQQFM+TFQQ       KAAA HIS+SVFYISIGINDYIHY+LFNIS+                                          
Subjt:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------

Query:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD
                                     +MRYVVEELGME+PDSNIIFC LLQGS+DILKN                HE           + GFNVT++
Subjt:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD

Query:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE
        ACCGFGRYN                                   DNVWN L TTMCYPKNL++
Subjt:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE

XP_022136745.1 GDSL esterase/lipase At1g71691 [Momordica charantia]

3.2e-31

39.62

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Query:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------
        LGQHISFTQ+IQQFM+TFQQ       K AA HIS+SVFYISIGINDYIHY+LFNISS                                          
Subjt:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------

Query:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD
                                     +MRY+VEELGME+PDS+IIFC LL+GS+DILKN                HE             GFNVTTD
Subjt:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD

Query:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKERL
        ACCGFGRYN                                   +NVWN L TTMCYPKNLK+ L
Subjt:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKERL

XP_038904573.1 GDSL esterase/lipase At1g71691 [Benincasa hispida]

1.2e-30

39.16

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Query:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------
        LGQHISFTQ+IQQFM+TFQQ        AAA HIS+SVFYISIGINDYIHY+LFNIS+                                          
Subjt:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------

Query:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD
                                     +MRY+VEELGME+PDS+IIFC LLQGS+DILKN                HE             GFNVT+D
Subjt:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD

Query:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE
        ACCGFGRYN                                   DNVWN L TTMCYPKNL++
Subjt:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7F0 Uncharacterized protein

4.1e-32

39.92

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Query:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------
        LGQHISFTQ+IQQFM+TFQQ       KAAA HIS+SVFYISIGINDYIHY+LFNIS+                                          
Subjt:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------

Query:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD
                                     +MRYVVEELGME+PDSNIIFC LLQGS+DILKN                HE           + GFNVT++
Subjt:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD

Query:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE
        ACCGFGRYN                                   DNVWN L TTMCYPKNL++
Subjt:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE

A0A1S3BSQ9 GDSL esterase/lipase At1g71691-like

7.7e-31

38.78

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Query:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------
        LGQHISFTQ+IQQFM+TFQQ       KAAA HIS+SVFYISIGINDYIHY+LFNIS+                                          
Subjt:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------

Query:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD
                                     +MRY+VEELGME+PDS+IIFC LL+GS+DILKN                HE           + GFNVT++
Subjt:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD

Query:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE
        ACCGFGRYN                                   DNVWN L TTMCYPKNL++
Subjt:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE

A0A5A7UZU1 GDSL esterase/lipase

7.7e-31

38.78

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Query:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------
        LGQHISFTQ+IQQFM+TFQQ       KAAA HIS+SVFYISIGINDYIHY+LFNIS+                                          
Subjt:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------

Query:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD
                                     +MRY+VEELGME+PDS+IIFC LL+GS+DILKN                HE           + GFNVT++
Subjt:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD

Query:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE
        ACCGFGRYN                                   DNVWN L TTMCYPKNL++
Subjt:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE

A0A6J1C4U4 GDSL esterase/lipase At1g71691

1.5e-31

39.62

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Query:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------
        LGQHISFTQ+IQQFM+TFQQ       K AA HIS+SVFYISIGINDYIHY+LFNISS                                          
Subjt:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------

Query:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD
                                     +MRY+VEELGME+PDS+IIFC LL+GS+DILKN                HE             GFNVTTD
Subjt:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD

Query:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKERL
        ACCGFGRYN                                   +NVWN L TTMCYPKNLK+ L
Subjt:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKERL

A0A6J1JB87 GDSL esterase/lipase At1g71691

1.5e-29

38.4

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Query:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------
        LGQHISFT++IQQFM+TFQQ        AAA HIS SVFYISIGINDYIHY+LFNIS                                           
Subjt:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------

Query:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD
                                     +MRY+VEELGME+PD +IIFC LLQGS+DILKN                HE             GFNVT+D
Subjt:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD

Query:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE
        ACCGFGRYN                                   DNVWN L TTMCYPKNL++
Subjt:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKE

SwissProt top hits

e value

%identity

Alignment

O22993 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic

1.2e-20

71.62

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Query:  ERLSQVVFGWLDDESYMFERQPQLLHRLQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLAPEILRMLAVIWRI
        + LSQVVF  LDDESYMF R PQLLHRLQVLLGGRAAEEVIYG DTS AS  YL++ASWLA +IL     IW +
Subjt:  ERLSQVVFGWLDDESYMFERQPQLLHRLQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLAPEILRMLAVIWRI

Arabidopsis top hits

e value

%identity

Alignment

AT4G10950.1 SGNH hydrolase-type esterase superfamily protein

4.3e-18

27.17

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Query:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------
        LGQ +SF  +++QF++TFQQ       KA+   +S+SVFYISIG+NDYIH+++ NIS+                                          
Subjt:  LGQHISFTQKIQQFMNTFQQ-------KAAAYHISHSVFYISIGINDYIHYHLFNISS------------------------------------------

Query:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD
                                      MRY V++L  E+P ++II+C + Q ++DIL+N                H+           H GFN TTD
Subjt:  -----------------------------SMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFLRHESNSHLIVSFCFHLGFNVTTD

Query:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKERL
        ACCG GRY                                    DNVWN     MCYP NL+  L
Subjt:  ACCGFGRYN-----------------------------------DNVWNDLRTTMCYPKNLKERL

AT4G23940.1 FtsH extracellular protease family

8.4e-22

71.62

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Query:  ERLSQVVFGWLDDESYMFERQPQLLHRLQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLAPEILRMLAVIWRI
        + LSQVVF  LDDESYMF R PQLLHRLQVLLGGRAAEEVIYG DTS AS  YL++ASWLA +IL     IW +
Subjt:  ERLSQVVFGWLDDESYMFERQPQLLHRLQVLLGGRAAEEVIYGRDTSNASFSYLTNASWLAPEILRMLAVIWRI

Sequences

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CDS sequence

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ATGGAAGAATACCCGTCGATTTTACTGGTTATGTTGGGCCAACACATTTCCTTCACACAGAAAATTCAGCAATTTATGAACACTTTTCAGCAGAAAGCTGCTGCCTATCA
CATTTCCCACTCAGTCTTTTACATATCTATTGGAATCAACGATTACATTCACTACCATCTGTTTAACATATCTAGTTCCATGAGATACGTGGTTGAGGAGCTCGGCATGG
AAGTGCCTGATTCAAATATTATCTTCTGTGTTTTGCTTCAAGGCTCACTGGATATTCTGAAGAACATGAATGTTACCGTGAATGACAATCTAACTTCCTTTCATTTCCTC
CGCCATGAATCAAATTCGCATCTCATTGTGTCATTTTGTTTTCATCTAGGTTTCAATGTAACTACTGATGCTTGTTGTGGGTTTGGTCGCTACAATGACAATGTGTGGAA
TGACCTCCGTACAACAATGTGCTATCCTAAGAACTTGAAGGAGAGACTGTCACAAGTTGTATTTGGTTGGCTTGATGATGAATCATACATGTTTGAGCGGCAACCACAAT
TACTTCACCGTCTTCAGGTGTTACTTGGAGGCAGGGCCGCAGAAGAGGTCATCTATGGACGAGACACATCAAATGCATCGTTTAGCTATCTTACCAATGCTTCATGGCTG
GCTCCTGAAATTTTAAGAATGTTAGCTGTAATTTGGAGAATCCCATGGTGA

mRNA sequence

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AACCCTAAAGATTACAATTTTTTGGCGCCGAGCTCTAATGGCTTCACAGTCCCTCCAAATTCATCTTTTCCGATTTCCCCCTCCGTCGAATTCTCTAGTCCCCGCCCTTT
TCGTCATCGGCGACTCTACTGTCGACTGCGGCACCAACAATTTACTTGGTACCATCGATCGCGCCCATCACCTTCCCTATTGTCGAGATTTCGACTGGAAGGTTTTGTAA
TGGAAGAATACCCGTCGATTTTACTGGTTATGTTGGGCCAACACATTTCCTTCACACAGAAAATTCAGCAATTTATGAACACTTTTCAGCAGAAAGCTGCTGCCTATCAC
ATTTCCCACTCAGTCTTTTACATATCTATTGGAATCAACGATTACATTCACTACCATCTGTTTAACATATCTAGTTCCATGAGATACGTGGTTGAGGAGCTCGGCATGGA
AGTGCCTGATTCAAATATTATCTTCTGTGTTTTGCTTCAAGGCTCACTGGATATTCTGAAGAACATGAATGTTACCGTGAATGACAATCTAACTTCCTTTCATTTCCTCC
GCCATGAATCAAATTCGCATCTCATTGTGTCATTTTGTTTTCATCTAGGTTTCAATGTAACTACTGATGCTTGTTGTGGGTTTGGTCGCTACAATGACAATGTGTGGAAT
GACCTCCGTACAACAATGTGCTATCCTAAGAACTTGAAGGAGAGACTGTCACAAGTTGTATTTGGTTGGCTTGATGATGAATCATACATGTTTGAGCGGCAACCACAATT
ACTTCACCGTCTTCAGGTGTTACTTGGAGGCAGGGCCGCAGAAGAGGTCATCTATGGACGAGACACATCAAATGCATCGTTTAGCTATCTTACCAATGCTTCATGGCTGG
CTCCTGAAATTTTAAGAATGTTAGCTGTAATTTGGAGAATCCCATGGTGA

Protein sequence

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MEEYPSILLVMLGQHISFTQKIQQFMNTFQQKAAAYHISHSVFYISIGINDYIHYHLFNISSSMRYVVEELGMEVPDSNIIFCVLLQGSLDILKNMNVTVNDNLTSFHFL
RHESNSHLIVSFCFHLGFNVTTDACCGFGRYNDNVWNDLRTTMCYPKNLKERLSQVVFGWLDDESYMFERQPQLLHRLQVLLGGRAAEEVIYGRDTSNASFSYLTNASWL
APEILRMLAVIWRIPW

CmoCh04G007240 (gene) of Cucurbita moschata (Rifu) v1 genome